prot_H-elongata_contig54754.12867.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.440e-36 Identity = 77/182 (42.31%), Postives = 108/182 (59.34%), Query Frame = 0
Query: 46 QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
+ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP+ G K + ++ G + P RE G +MW +T +R D+SFA +A P HW A QK L YL TRD+GITY+
Sbjct: 199 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG-------EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 372
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6A4BM10_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BM10_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.680e-36 Identity = 78/244 (31.97%), Postives = 123/244 (50.41%), Query Frame = 0
Query: 2 VLSMITALGWEARQLDADMAYLEAEVEEEIYVEASRPIKEGNRSQADPCVFRRILHGI-------------VVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTS-IIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYRGEPG 231
VLS++ A + QLDAD A+L ++++E+++ E I C + ++ + V + +YVDD+++A+ + N+ + L S F +K+LGE + G I DR AGTL Q +YI V R ++ G L+K S T AE + M+ PYR + G L++ T TR D+ + QL+ F +NPG HW+AA + L+YL T+D+GI Y G
Sbjct: 43 VLSVVVAKAYVTEQLDADTAFLNSDLKEQVFTEVPYGITNAENMM---CKLDKAIYAVGPTSCVYVKGTKDAFVYVCLYVDDMIIAAKTTEEINEVKMALKSAFKMKELGETKFIFGMEIDHDRMAGTLMIKQTRYIDDVTNRVNQQDAKEVVNPCESGMKLTKMQSPTTNAERQAMKTKPYRSLIGCLLYITTCTRPDVVYIVTQLSRFLENPGQQHWKAAIRVLRYLKSTKDLGIIYNSNDG 283
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE) HSP 1 Score: 141 bits (356), Expect = 5.090e-36 Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 0
Query: 46 QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
+ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP A G L + G E P RE G +MW +T +R D+SFA +A P HW A QK L YL TRD+GITY+
Sbjct: 135 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVQSTSRIP-ATPGADLGPQREDEEGGEW------PVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 308
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A2N9FYA1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FYA1_FAGSY) HSP 1 Score: 144 bits (362), Expect = 1.290e-35 Identity = 82/229 (35.81%), Postives = 125/229 (54.59%), Query Frame = 0
Query: 1 MVLSMITALGWEARQLDADMAYLEAEVEEEIYVEASRPIKEGNRSQADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAG-GKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYRG 228
++L+M+ +L E Q+D A+L E+++EI+++ S + + D CV+ + G +++ +YVDD+L+A K + L S F +KD+GEAS+ LG I RDR L Q YI+ V ERF + I + G G SLS +T E+E M ++PY G LM+A TR DI FA ++ F NPGP HW+A ++ L+YL D + Y+G
Sbjct: 552 LILAMVASLDLELHQMDVKTAFLNGELDKEIFMDQSIGFVVKGQERKDHCVYVKRSEG-SFIILSLYVDDILLAENDKEFIKTIKEWLSSTFEMKDMGEASFVLGVKILRDRLKKLLGLSQETYIRKVLERFHMQDCKPIDTHVGKGDSLSSEMCPKTQVEIESMARVPYTNAIGSLMYAILCTRPDICFAVGLVSKFQSNPGPAHWKAVKRILRYLHGIEDYMLCYQG 779
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.460e-35 Identity = 77/182 (42.31%), Postives = 108/182 (59.34%), Query Frame = 0
Query: 46 QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
+ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP+ G K + ++ G + P RE G +MW +T +R D+SFA +A P HW A QK L YL TRD+GITY+
Sbjct: 912 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG-------EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 1085
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.470e-35 Identity = 77/182 (42.31%), Postives = 109/182 (59.89%), Query Frame = 0
Query: 46 QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
+ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP+ G K + ++ G + P R+ G +MW +T +R D+SFAA +A P HW A QK L YL TRD+GITY+
Sbjct: 1021 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG-------EWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 1194
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.480e-35 Identity = 90/248 (36.29%), Postives = 129/248 (52.02%), Query Frame = 0
Query: 1 MVLSMITALGWEARQLDADMAYLEA-EVEEEIYVEASRPI---KEGNRS-----------------QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
++L++ G D AY A + EE+ V+A R I K+ R +ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP+ G K + ++ G + P RE G +MW +T +R D+SFA + P HW A QK L YL TRD+GITY+
Sbjct: 783 LMLAVANEKGMNLNHWDVKQAYTHATQDEEQKIVKAERAIYGLKQSGRQFGYHAADTQVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKMFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG-------EWPVREAIGSMMWVSTFSRPDVSFAVRAVVRHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 1022
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.560e-35 Identity = 77/182 (42.31%), Postives = 108/182 (59.34%), Query Frame = 0
Query: 46 QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
+ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP+ G K + ++ G + P RE G +MW +T +R D+SFA +A P HW A QK L YL TRD+GITY+
Sbjct: 1291 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG-------EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 1464
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.570e-35 Identity = 77/182 (42.31%), Postives = 108/182 (59.34%), Query Frame = 0
Query: 46 QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
+ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP+ G K + ++ G + P RE G +MW +T +R D+SFA +A P HW A QK L YL TRD+GITY+
Sbjct: 1311 KADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG-------EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 1484
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 143 bits (360), Expect = 2.580e-35 Identity = 77/182 (42.31%), Postives = 108/182 (59.34%), Query Frame = 0
Query: 46 QADPCVFRRILHGIVVVVIMVYVDDLLVASAAKRDENQAERDLCSCFPIKDLGEASYYLGCHITRDRNAGTLKCDQHQYIQTVAERFGVTKTSIIPSAAGGKSLSKSDSQQTGAEVEEMRQIPYREIFGVLMWAATMTRADISFAAHQLANFNDNPGPTHWRAAQKALQYLWRTRDVGITYR 227
+ADPCVFR+++ +VV++I++YVDD+LVA + + D + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS IP+ G K + ++ G + P RE G +MW +T +R D+SFA +A P HW A QK L YL TRD+GITY+
Sbjct: 1454 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG-------EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ 1627 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54754.12867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig54754.12867.1 ID=prot_H-elongata_contig54754.12867.1|Name=mRNA_H-elongata_contig54754.12867.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=239bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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