prot_H-elongata_contig53482.12691.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: D8LLK7_ECTSI (COG0557: Exoribonuclease R n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK7_ECTSI) HSP 1 Score: 170 bits (431), Expect = 3.080e-47 Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNG-GEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVKV 102
T +VDDGLSVE LP+G GE VWVHIADVSRWVPEGSPLY+E+R +RTT YLPEG+ PMFPAEVAHGVLSLR+G ECY+LSMGI LGE+GEITDV VTP+LVKV
Sbjct: 335 TNEVDDGLSVEALPDGAGERVWVHIADVSRWVPEGSPLYEEARRKRTTIYLPEGAEPMFPAEVAHGVLSLRSGHECYSLSMGITLGESGEITDVIVTPALVKV 437
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: A0A6H5KWU3_9PHAE (RNB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU3_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.840e-30 Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNG-GEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLR 70
T +VDDGLSVE LP+G GE VWVHIADVSRWVPEGSPLY+E+R RRTT YLPEG+ PMFPAEVAHGVLSLR
Sbjct: 433 TNEVDDGLSVEALPDGAGERVWVHIADVSRWVPEGSPLYEEARRRRTTIYLPEGAEPMFPAEVAHGVLSLR 503
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: K9RQP0_SYNP3 (Exoribonuclease R n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RQP0_SYNP3) HSP 1 Score: 122 bits (307), Expect = 2.190e-30 Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVK 101
T+++DDG+S+ETLPNG E +W+HIAD SRW+ G L QE+R R TT YLP G +PMFP E+A G +SL AGK C ALS GI L +G I D ++ PSL+K
Sbjct: 284 TQEIDDGISLETLPNGQERLWIHIADPSRWLLLGDGLEQEARRRATTVYLPTGMIPMFPPELATGPMSLVAGKTCCALSFGIILQPDGSIADYQICPSLIK 384
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: A0A251WEU1_9CYAN (RNB domain-containing ribonuclease n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WEU1_9CYAN) HSP 1 Score: 114 bits (286), Expect = 1.600e-27 Identity = 54/102 (52.94%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVKV 102
TR++DDGLSVE LP+G E VW+HIAD +RW+ G PL E+R R TT YLP G + MFP E+A G +SL AG C ALS G+ L NG + D + S +K+
Sbjct: 282 TREIDDGLSVEYLPDGSERVWIHIADPTRWLLPGDPLDLEARRRSTTLYLPTGMISMFPTELATGPMSLNAGAVCCALSFGVLLDANGAVQDFNIHASHIKI 383
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: A0A835Z4Y9_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y9_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.340e-27 Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0
Query: 8 LSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVKV 102
+SVE LPNG E VWVHIADVSRWV +GS L Q++ R+TT YLPE SVPMFP ++A VLSL AG+ C ALSMG+ L + G I D+ V S + V
Sbjct: 439 VSVERLPNGRERVWVHIADVSRWVQQGSALDQDAARRQTTLYLPEQSVPMFPRDLAENVLSLTAGRPCPALSMGVILNDAGAIEDLTVVASTIVV 533
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: A0A7T5E447_9CYAN (RNB domain-containing protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A7T5E447_9CYAN) HSP 1 Score: 114 bits (284), Expect = 3.000e-27 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVK 101
T+++DDGLS+ETL +G + +W+HIAD +RWV G L E+R R TT YLP G +PMFPAE+A G +SL G+ C ALS GI LGE G++ D + SL+K
Sbjct: 282 TQEIDDGLSLETLEDGRQRIWIHIADPTRWVIPGDDLDLEARRRCTTVYLPTGIIPMFPAELATGPMSLVQGQICCALSFGIVLGEAGDVQDYTIATSLIK 382
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: UPI0019DC012E (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Leptolyngbyaceae cyanobacterium M65_K2018_010 TaxID=2747810 RepID=UPI0019DC012E) HSP 1 Score: 114 bits (284), Expect = 3.000e-27 Identity = 52/101 (51.49%), Postives = 72/101 (71.29%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVK 101
T+++DDGLS+ETL NG + +W+H+AD +RW+ G L E+R R TT YLP G +PMFP E+A G +SLR G+ C ALS G++L G+I D + PSL+K
Sbjct: 281 TQEIDDGLSLETLANGTQRLWIHVADPTRWLLPGDALDLEARRRCTTLYLPTGMIPMFPVELATGPMSLRQGEVCCALSFGVSLTAAGDIADYTICPSLIK 381
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: UPI001683B28D (ribonuclease R n=2 Tax=Leptolyngbya TaxID=47251 RepID=UPI001683B28D) HSP 1 Score: 113 bits (283), Expect = 4.100e-27 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVK 101
TR++DDG+SVE LP+G +WVHIAD +RWV G L E+R R TT YLP G +PMFP+E+A G +SL G+ C ALS G+ L E G I + + PSL+K
Sbjct: 288 TREIDDGVSVEFLPDGRHRLWVHIADPTRWVMPGDDLDLEARRRSTTVYLPTGMIPMFPSELATGPMSLNQGQVCTALSFGVILDEMGAIEEYEIHPSLIK 388
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: UPI0019FFB23C (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019FFB23C) HSP 1 Score: 113 bits (282), Expect = 5.590e-27 Identity = 52/101 (51.49%), Postives = 72/101 (71.29%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVK 101
T+++DDG+S+ETL +G + +W+HIAD +RWV G L E+R R TT YLP G VPMFP E+A G +SL G+EC ALS G+ L E+G + + +T SL+K
Sbjct: 282 TQEIDDGISLETLTDGRQRIWIHIADPTRWVLPGDALDLEARRRCTTLYLPTGMVPMFPLELAAGPMSLTQGRECCALSFGVVLSEDGAVEEYCITASLIK 382
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Match: A0A6G3YVK1_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Leptolyngbya sp. SIO1D8 TaxID=2607807 RepID=A0A6G3YVK1_9CYAN) HSP 1 Score: 113 bits (282), Expect = 5.600e-27 Identity = 57/101 (56.44%), Postives = 69/101 (68.32%), Query Frame = 0
Query: 1 TRKVDDGLSVETLPNGGEMVWVHIADVSRWVPEGSPLYQESRARRTTSYLPEGSVPMFPAEVAHGVLSLRAGKECYALSMGIALGENGEITDVRVTPSLVK 101
TR++DDGLSVETL +G + +WVHIAD +RWV G L E+R R TT YLP G VPMFP E+A G +SL GK+C ALS G+ L E G I D + S VK
Sbjct: 281 TREIDDGLSVETLEDGRQRLWVHIADPTRWVLPGDDLDLEARRRCTTLYLPTGMVPMFPMELATGPMSLVQGKDCCALSFGVVLTEEGAIEDYSIAASRVK 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53482.12691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig53482.12691.1 ID=prot_H-elongata_contig53482.12691.1|Name=mRNA_H-elongata_contig53482.12691.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bpback to top |