prot_H-elongata_contig5203.12486.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5203.12486.1
Unique Nameprot_H-elongata_contig5203.12486.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length363
Homology
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 4.970e-25
Identity = 87/237 (36.71%), Postives = 117/237 (49.37%), Query Frame = 0
Query:  131 GTTYFASNNAVFNGGAIGGSATADTFYG--DSRLIANGSMTLMNNTCGGNGGAIDLTG-ISFVIHGN--VSFLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTD-SYYKEYYASEFINCIFEGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFMGFNK 361
            G T F SN A F+GGAI  S   D+ Y   +S L  NG+ T  NN CGGNGG + L G  + VI     +SF+ N+A   GGA++ S    GL      F  N A+ GG         F SG +      +    + F  C F G                 F   T F  N+A  GGA+R +GT S++N SF+EN S +GGG A+SN G++S    + FSGNG+ C    F+ +N+
Sbjct:  685 GVTNFTSNQAFFDGGAIV-SPQLDSEYNPSESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGA-----VATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNE 915          
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 3.300e-22
Identity = 77/217 (35.48%), Postives = 108/217 (49.77%), Query Frame = 0
Query:  149 GSATADTFYG--DSRLIANGSMTLMNNTCGGNGGAIDLTG-ISFVIH-GNVSFLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTDSYYKEYYASEFINCIFEGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFMGFNK 361
            GS  +D+     DS L  +G    +NNT G NGGA+ L G +S  ++ G  SF+ NSA   GGA+Y S   IG    +V F  N A+ GG        +  SG+       +   + F  C F                     + T+F  N A  GGA+R +G  SL+N SF+EN+S++G G A+SN GVISE+    FSGN + C+PD F+ +  
Sbjct:  304 GSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGA-----VSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS 515          
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: A0A6H5KR67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR67_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.580e-22
Identity = 83/243 (34.16%), Postives = 113/243 (46.50%), Query Frame = 0
Query:  121 LYNDVVVRNEGTTYFASNNAVFNGGAIGGSATADTFYG--DSRLIANGSMTLMNNTCGGNGGAIDLTG-ISFVIHGNVS-FLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTDSYYKEYYASEFINCIFEGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFMGF 359
            L N   V + G T    N A+ +GGA+G S  +D+     DS L  +G    +NNT G NGGA+ L G +S  ++   S F+ NSA   GG +Y S   IG    +V F  N A  GG                         + F  C F                     + T+F  N A  GGA+R +G  SL N SF+EN+S+EG G A+SN G+ISE+    FSGN + C+PD F+ +
Sbjct:  287 LLNGSYVSSTGDTKVVRNGALVDGGAVG-SVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGELSISVNTEESSFVDNSADLAGGTVYVSDTAIGPTFSDVIFDSNFAHVGGALL---------------------PTTFSRCRFTYNRETATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLENCSFVENLSDEGEGAAVSNVGIISEISNTSFSGNVFNCAPDTFLNY 507          
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 3.230e-21
Identity = 77/215 (35.81%), Postives = 107/215 (49.77%), Query Frame = 0
Query:  149 GSATADTFYG--DSRLIANGSMTLMNNTCGGNGGAIDLTG-ISFVIHGN-VSFLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTDSYYKEYYASEFINCIFEGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFMGF 359
            GS  +D+     DS L  +G    +NNT G NGGA+ L G +S  ++    +F+ NSA   GGA+Y S   IG    +V F  N A+ GG        A  SG+       +   + F  C F                     + T+F  N A  GGA+R +G  SL+N SF+EN+S+EG G A+SN GVISE+    FSGN + C+PD F+ +
Sbjct: 2217 GSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTEETNFVDNSADLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGA-----VSALGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENISDEGEGAAVSNVGVISEISNTSFSGNVFNCAPDTFLNY 2426          
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 8.460e-18
Identity = 75/220 (34.09%), Postives = 105/220 (47.73%), Query Frame = 0
Query:  144 GGAIGGSATADTFYGDSRLIANGSMTLMNNTCGGNGGAIDLTGISFVIHG--NVSFLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTDSYYKEYYASEFINCIF-EGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFMGFN 360
            GG IG  +T       S L+ NG+   +NNTCG NGGA+ L G   V  G  NVSF+GN+A   GGA++ S    G      +F  N A+ GG    S  G+       D        + F +C F +                  FV  T F  N A  GG +R +GT SL   SF++N+S++ GG A+SN G +  +  + FSGN + C P  ++ +N
Sbjct:  537 GGVIGSFSTDSVSNQGSTLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGA--VSTVGSGNLKENADISPPN--PTTFDHCHFIDNRATATGGAIDSAAGQDAFVNST-FQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYN 751          
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.850e-12
Identity = 64/204 (31.37%), Postives = 93/204 (45.59%), Query Frame = 0
Query:  160 SRLIANGSMTLMNNTCGGNGGAID-LTGISFVIH-GNVSFLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTDSYYKEYYA-SEFINCIFEGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFMGFN 360
            S L+ NG    +NNTCGG+GG +    G+S  I    V+F GN+A   GGA++ S   +G       F                    SG+    +  E+ + + F  C F G                    G +F  N A  GGA+R +GT S+ N SF++N+S++G G A+SN G IS+M  + FS N + C    F+  N
Sbjct:  523 STLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFV-----FXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLN 721          
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 3.230e-10
Identity = 52/167 (31.14%), Postives = 76/167 (45.51%), Query Frame = 0
Query:  194 NVSFLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTDSYYKEYYA---SEFINCIFEGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFM 357
            N  F+GN+A   GGA++ S   +G    N+    N A+ GG      +G         S+  E Y    + F  C F                       ++F  N+A  GGA+R +GT  + N SF+EN+S++GGG A+SN G +S +  L FS N Y C    F+
Sbjct:  310 NTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGT--------SFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFL 468          
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.550e-9
Identity = 55/173 (31.79%), Postives = 79/173 (45.66%), Query Frame = 0
Query:  195 VSFLGNSALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTTDSYYKEYYA-------SEFINCIFEGXXXXXXXXXXXXXXXTYFVQGTIFTRNSAELGGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQCSPDAFMGFN 360
            V F  N+A   GGA++ S  ++G  L +V F  N+A+ GG             ST  S   + YA       + F  C F                        +F       GGA+R +GT +L N SF+EN+SE+GGG A+SN G IS+M  + + GN + C+   F+ FN
Sbjct: 1399 VVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAV-----------STVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFN 1560          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5203.12486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LIY0_ECTSI4.970e-2536.71Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI3.300e-2235.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR67_9PHAE5.580e-2234.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG7_ECTSI3.230e-2135.81LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G301_ECTSI8.460e-1834.09Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FTL7_ECTSI1.850e-1231.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G2Z8_ECTSI3.230e-1031.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI1.550e-931.79Polymorphic Outer membrane protein G/I family n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 194..211
e-value: 0.036
score: 14.5
coord: 27..43
e-value: 0.0042
score: 17.5
coord: 264..282
e-value: 0.0044
score: 17.4
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 25..44
e-value: 0.001
score: 16.8
coord: 266..285
e-value: 5.2E-4
score: 17.7
coord: 193..212
e-value: 7.8E-5
score: 20.4
coord: 165..182
e-value: 0.0034
score: 15.2
coord: 293..312
e-value: 3.3E-4
score: 18.4
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 10..239
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 10..239
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 199..335
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 199..335
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 86..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5203contigH-elongata_contig5203:304..1800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5203.12486.1mRNA_H-elongata_contig5203.12486.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5203 304..1809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5203.12486.1 ID=prot_H-elongata_contig5203.12486.1|Name=mRNA_H-elongata_contig5203.12486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=363bp
MTISNGAGIVGGAIISAEDSELTAKSVAFSSNTAQVVGGAIYAVSSKVEL
VSTTFDTNSADYGGALFLGNSTVFGTGYTSFIRNNASRNGGAVFITRNSY
LGWNMQPVFRNRGQNGGALFLYNDVVVRNEGTTYFASNNAVFNGGAIGGS
ATADTFYGDSRLIANGSMTLMNNTCGGNGGAIDLTGISFVIHGNVSFLGN
SALSFGGALYASRVNIGLKLYNVKFSGNIAEAGGGSFFSEAGAFQSGSTT
DSYYKEYYASEFINCIFEGNSAYSTGGAIYSTAGTYFVQGTIFTRNSAEL
GGAIRSSGTISLLNSSFIENMSEEGGGPAISNGGVISEMLGLQFSGNGYQ
CSPDAFMGFNKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence