prot_H-elongata_contig52007.12484.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52007.12484.1
Unique Nameprot_H-elongata_contig52007.12484.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: D7FXB9_ECTSI (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB9_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.640e-37
Identity = 58/84 (69.05%), Postives = 69/84 (82.14%), Query Frame = 0
Query:    1 MVKRLIAVGGDYVRPLGSRHEILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLPEMHRRSNP 84
            +VKRLI V GD+VRP G++H ++RVP+G CWVEGDN   SGDSN FGPIPLALIEAK+THVLWPP R+  L Q+LPE+HR  NP
Sbjct:   89 VVKRLIGVDGDWVRPRGNKHNLMRVPEGYCWVEGDNHGVSGDSNHFGPIPLALIEAKVTHVLWPPGRMRSLGQDLPEIHRGLNP 172          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: A0A388KQ27_CHABU (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KQ27_CHABU)

HSP 1 Score: 101 bits (251), Expect = 5.450e-26
Identity = 43/77 (55.84%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 MVKRLIAVGGDYVRPLGSRHEILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLPE 77
            +VKRLIA+ GD+V   G+ ++I +VP+G CWVEGDNP  S DS  FGP+PLAL+E ++THV+WPP R G ++  +PE
Sbjct:   25 LVKRLIALQGDWVSVPGT-YDITQVPKGHCWVEGDNPMVSSDSKAFGPVPLALLEGRVTHVIWPPTRAGRVESRVPE 100          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: A0A2G5CLM4_AQUCA (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CLM4_AQUCA)

HSP 1 Score: 101 bits (252), Expect = 1.990e-25
Identity = 43/76 (56.58%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    2 VKRLIAVGGDYVRPLGSRHEILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLPE 77
            +KR+IA+ GD++    S  E L++P+G CWVEGDNP  S DS  FGPIPLALIE K+TH++WPP+R+G +++ LPE
Sbjct:   89 IKRIIALEGDWINVPNS-FETLKIPRGHCWVEGDNPTNSVDSRSFGPIPLALIEGKVTHIIWPPQRVGKVEKILPE 163          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: A0A2P5BQT5_PARAD (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BQT5_PARAD)

HSP 1 Score: 100 bits (250), Expect = 3.690e-25
Identity = 41/78 (52.56%), Postives = 60/78 (76.92%), Query Frame = 0
Query:    2 VKRLIAVGGDYVRPLGSRH--EILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLPE 77
            +KR+I + GD+V   G RH  ++ RVPQG CWVEGDNP  S DSN FGP+PL L++ ++TH++WPP+R+G +++ +PE
Sbjct:   86 IKRIIGLPGDWV---GIRHSSDVFRVPQGHCWVEGDNPASSMDSNTFGPVPLGLVQGRVTHIVWPPQRLGAVEKRVPE 160          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: A0A2K1K4M5_PHYPA (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K4M5_PHYPA)

HSP 1 Score: 101 bits (251), Expect = 3.740e-25
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 MVKRLIAVGGDYVRPLGSRHEILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLPE 77
            +VKRLIA+ GD+V   G+ ++IL+VP+G CWVEGDN   S DS  FGPIPL L++ K+THV+WPP R GP+  +LPE
Sbjct:   91 LVKRLIALQGDWVTVPGT-YDILQVPKGHCWVEGDNAEISLDSKSFGPIPLGLMKGKVTHVVWPPSRFGPVASHLPE 166          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: A0A2P2J7I6_RHIMU (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J7I6_RHIMU)

HSP 1 Score: 99.0 bits (245), Expect = 4.330e-25
Identity = 39/74 (52.70%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    2 VKRLIAVGGDYVRPLGSRHEILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNL 75
            VKR+I + GD++    S H+++++PQG CWVEGD+P FS DS  FGPIPL LI  ++TH++WPPRR+G +D+ +
Sbjct:   27 VKRIIGLPGDWIGTPYS-HDVVKIPQGHCWVEGDDPSFSMDSRSFGPIPLGLINGRVTHIVWPPRRVGKVDRRI 99          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: A0A6P4APA3_ZIZJJ (Mitochondrial inner membrane protease subunit 2 n=3 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4APA3_ZIZJJ)

HSP 1 Score: 100 bits (249), Expect = 5.800e-25
Identity = 41/77 (53.25%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    2 VKRLIAVGGDYVRPLGSRH--EILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLP 76
            +KR+IA+ GD++   G RH  ++LR+P G CWVEGDNP  S DSN FGPIPL L++ ++TH++WPP+RIG +++ +P
Sbjct:   90 IKRVIALPGDWI---GIRHTSDVLRIPDGHCWVEGDNPSSSMDSNSFGPIPLGLVKGRVTHIVWPPQRIGAVEKRIP 163          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: Q7XS59_ORYSJ (Mitochondrial inner membrane protease subunit 2 n=10 Tax=Oryza TaxID=4527 RepID=Q7XS59_ORYSJ)

HSP 1 Score: 100 bits (248), Expect = 7.030e-25
Identity = 40/77 (51.95%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    1 MVKRLIAVGGDYVRPLGSRHEILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLPE 77
            +VKRLIA+ GD+++ + +  EI ++P G CWVEGDNP  S DS  +GPIPL L++ ++TH++WPP RIGP+++ +PE
Sbjct:   83 LVKRLIALPGDWIQ-VPAAQEIRQIPVGHCWVEGDNPDVSWDSRSYGPIPLGLMQGRVTHIVWPPNRIGPVERKMPE 158          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: W9SRW4_9ROSA (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9SRW4_9ROSA)

HSP 1 Score: 100 bits (248), Expect = 7.410e-25
Identity = 40/78 (51.28%), Postives = 60/78 (76.92%), Query Frame = 0
Query:    2 VKRLIAVGGDYVRPLGSRH--EILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLPE 77
            +KR+I + GD++   G RH  ++LR+P+G CWVEGDNP  S DSN FGP+PL L+  ++TH++WPP+RIG +++ +PE
Sbjct:   86 IKRIIGLPGDWI---GIRHCSDVLRIPEGHCWVEGDNPASSMDSNTFGPVPLGLVAGRVTHIVWPPQRIGAVERKVPE 160          
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Match: A0A8K0HBZ9_9ROSA (Uncharacterized protein n=2 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HBZ9_9ROSA)

HSP 1 Score: 99.4 bits (246), Expect = 1.480e-24
Identity = 40/77 (51.95%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    2 VKRLIAVGGDYVRPLGSRH--EILRVPQGSCWVEGDNPRFSGDSNQFGPIPLALIEAKITHVLWPPRRIGPLDQNLP 76
            +KR+IA+ GD++   G RH  ++ R+P+G CWVEGDNP  S DSN FGPIPL L++ ++TH++WPP+RIG +++ +P
Sbjct:   86 IKRIIALPGDWI---GIRHCSDVRRIPEGHCWVEGDNPSSSMDSNSFGPIPLGLVKGRVTHIVWPPQRIGAVEKRIP 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52007.12484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXB9_ECTSI3.640e-3769.05Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A388KQ27_CHABU5.450e-2655.84Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A2G5CLM4_AQUCA1.990e-2556.58Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A2P5BQT5_PARAD3.690e-2552.56Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A2K1K4M5_PHYPA3.740e-2558.44Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A2P2J7I6_RHIMU4.330e-2552.70Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A6P4APA3_ZIZJJ5.800e-2553.25Mitochondrial inner membrane protease subunit 2 n=... [more]
Q7XS59_ORYSJ7.030e-2551.95Mitochondrial inner membrane protease subunit 2 n=... [more]
W9SRW4_9ROSA7.410e-2551.28Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A8K0HBZ9_9ROSA1.480e-2451.95Uncharacterized protein n=2 Tax=Rhamnella rubriner... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 25..44
score: 46.07
coord: 1..13
score: 49.45
NoneNo IPR availableGENE3D2.10.109.10coord: 1..81
e-value: 2.1E-10
score: 42.4
NoneNo IPR availablePANTHERPTHR46041FAMILY NOT NAMEDcoord: 1..73
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52007contigH-elongata_contig52007:1719..2591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52007.12484.1mRNA_H-elongata_contig52007.12484.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52007 1181..2645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52007.12484.1 ID=prot_H-elongata_contig52007.12484.1|Name=mRNA_H-elongata_contig52007.12484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MVKRLIAVGGDYVRPLGSRHEILRVPQGSCWVEGDNPRFSGDSNQFGPIP
LALIEAKITHVLWPPRRIGPLDQNLPEMHRRSNPGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR036286LexA/Signal_pep-like_sf