prot_H-elongata_contig51646.12438.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig51646.12438.1
Unique Name	prot_H-elongata_contig51646.12438.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	83

Homology

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 3.410e-45
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHRK 82
            +LPK  AK++P SRLLTEDEWR LGVQQSRGWQHYAVH PEPHILLFRRPLGTNPVTG+VDPELEREAKEKYA ELS G RK
Sbjct:   21 ILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 130 bits (328), Expect = 7.550e-38
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSG 79
            +LPK +A+ +P  RLLTE EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+PVTGKV+ ELEREAKEKYA  ++  
Sbjct:   22 ILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNGA 100

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.510e-36
Identity = 58/82 (70.73%), Postives = 68/82 (82.93%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHRK 82
            +LPK +AK +P +RLL E EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+PVTGKVD ELER+AK+ Y   L+   RK
Sbjct:   41 ILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLAVNQRK 122

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 4.550e-36
Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELS 77
            +LPK++AK +P SR+LTE EWR LGVQQSRGW HYA+HRPEPHILLF+RPLGT+PV+GKVDP LE+EAK+ Y  EL+
Sbjct:   22 ILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELA 98

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.090e-36
Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYALELSSGHR 81
            +LPK+ A+ +P +R LTE EWR++GVQQSRGW+HYA H+PEPHILLFRRPLGT+PV+G+VDPELEREA+EKY  EL+   R
Sbjct:   23 ILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELAVNQR 103

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2VEK7_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEK7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.210e-36
Identity = 54/72 (75.00%), Postives = 65/72 (90.28%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK +AK +P SRLLTE EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G+VDPELER A+++Y
Sbjct:   40 ILPKELAKTLPKSRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELERAARDEY 111

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.460e-35
Identity = 53/72 (73.61%), Postives = 66/72 (91.67%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK++AK +P +RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGT+P +G+VDPELEREA+E+Y
Sbjct:   24 ILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEY 95

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.520e-35
Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKYA--LELSSG 79
            +LPK +AK +P +RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGT+PVTGK+DP LEREAK+ Y   LEL+  
Sbjct:   40 ILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLELNQA 120

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BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO)

HSP 1 Score: 124 bits (312), Expect = 2.010e-35
Identity = 54/72 (75.00%), Postives = 65/72 (90.28%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK +AK +P SRLLTE EWRS+GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G+VDPEL + A+E+Y
Sbjct:   24 ILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEY 95

[Close]

BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Match: A0A7S3P5A6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5A6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.670e-35
Identity = 53/72 (73.61%), Postives = 65/72 (90.28%), Query Frame = 0

Query:    1 MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRPLGTNPVTGKVDPELEREAKEKY 72
            +LPK +AK +P SRLLTE EWRS+GVQQSRGWQHYA+HRPEPHILLFRRPLGT+P +G++DPEL R A+++Y
Sbjct:   55 ILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRIDPELARAARDEY 126

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot

BLAST of mRNA_H-elongata_contig51646.12438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2I6_9PHAE	3.410e-45	85.37	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
W7T145_9STRA	7.550e-38	73.42	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2BWV6_9STRA	1.510e-36	70.73	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
D7G7T5_ECTSI	4.550e-36	72.73	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S3MEH0_9STRA	5.090e-36	69.14	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S2VEK7_9STRA	8.210e-36	75.00	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A6S9ANL1_9STRA	1.460e-35	73.61	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2BBH9_9STRA	1.520e-35	70.37	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A1Z5K5B7_FISSO	2.010e-35	75.00	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S3P5A6_9STRA	3.670e-35	73.61	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 20..34 score: 77.44 coord: 35..49 score: 78.97
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 1..52 e-value: 1.4E-25 score: 101.0
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 1..50 e-value: 9.0E-24 score: 83.5
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00945	CKS_2	coord: 38..48
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 1..64 e-value: 1.3E-25 score: 91.3
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 1..54
None	No IPR available	PANTHER	PTHR23415:SF30	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT	coord: 1..52
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 1..52

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig51646	contig	H-elongata_contig51646:3401..3870 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig51646.12438.1	mRNA_H-elongata_contig51646.12438.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig51646 3401..3897 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig51646.12438.1 ID=prot_H-elongata_contig51646.12438.1|Name=mRNA_H-elongata_contig51646.12438.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MLPKNMAKVIPTSRLLTEDEWRSLGVQQSRGWQHYAVHRPEPHILLFRRP
LGTNPVTGKVDPELEREAKEKYALELSSGHRK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000789	Cyclin-dep_kinase_reg-sub
IPR036858	Cyclin-dep_kinase_reg-sub_sf