prot_H-elongata_contig51463.12409.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig51463.12409.1
Unique Name	prot_H-elongata_contig51463.12409.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	101

Homology

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: D8LDI0_ECTSI (Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI0_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.520e-60
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNG HLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE
Sbjct:  486 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGSHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 586

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.640e-60
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNG HLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE
Sbjct:  458 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGSHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 558

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: W7U4M8_9STRA (Swi snf matrix actin dependent regulator of subfamily member 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4M8_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.480e-48
Identity = 74/101 (73.27%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            MT MQR WY+ +L RD   LN LGG D++RLLNILMQLRKVCNHPYLF+GAEPGPP+++GPH+WE+ GKM+LL KLLP+L+ QGSRVL+FCQMTR LDILE
Sbjct:  165 MTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILE 265

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: A0A7S1ZB35_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB35_TRICV)

HSP 1 Score: 160 bits (405), Expect = 2.400e-48
Identity = 72/101 (71.29%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            +T MQ++WYK +L +D   LN LGGP K+RLLNILMQLRKVCNHPYLFDGAEPGPP+ +GPHLW+N+ KM LL KLLPKL+ +GSR+L+F QMTR+LDILE
Sbjct:   20 LTAMQQEWYKKVLTKDAHELNALGGPSKVRLLNILMQLRKVCNHPYLFDGAEPGPPYTDGPHLWDNSAKMALLNKLLPKLKAKGSRILIFTQMTRVLDILE 120

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: A0A7S1C7G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7G7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.030e-47
Identity = 77/101 (76.24%), Postives = 90/101 (89.11%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            M+PMQR+WYK +L++D   LN LGG D++RLLN+LMQLRKVCNHPYLFDGAEPGPP+ NGPHL ENAGKM LL +LLPKL+ QGSRVL+FCQMTR+LDILE
Sbjct:  336 MSPMQREWYKRVLSKDAHALNALGGTDRVRLLNVLMQLRKVCNHPYLFDGAEPGPPYTNGPHLHENAGKMSLLDRLLPKLKAQGSRVLIFCQMTRMLDILE 436

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: A0A7S3Q0P3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0P3_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.070e-46
Identity = 76/101 (75.25%), Postives = 91/101 (90.10%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            +TPMQ++WYK LLN+D   LN+LGGPD++RLLNILMQLRK+CNHPYLF+GAE GPP+ +GPHLWEN+GKM LL KLLPKL+ QGSRVL+F QMTR+LDILE
Sbjct:  360 LTPMQQEWYKRLLNKDAHKLNSLGGPDQVRLLNILMQLRKICNHPYLFEGAEQGPPYFDGPHLWENSGKMSLLNKLLPKLKAQGSRVLIFSQMTRILDILE 460

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: A0A7S2SFZ0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFZ0_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.070e-46
Identity = 76/101 (75.25%), Postives = 90/101 (89.11%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            ++  QR+WY  +L++D  +LN LGGPD+++LLN+LMQLRKVCNHPYLF+GAEPGPP+ NGPHLWENAGKMVLL KLLPKLR QGSRVL+F QMTRLLDILE
Sbjct:  444 LSAKQREWYTKILSKDAHSLNALGGPDRVKLLNVLMQLRKVCNHPYLFEGAEPGPPYTNGPHLWENAGKMVLLDKLLPKLRAQGSRVLIFSQMTRLLDILE 544

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: I2CQP0_NANGC (Atpase-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CQP0_NANGC)

HSP 1 Score: 165 bits (417), Expect = 1.750e-45
Identity = 74/101 (73.27%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            MT MQR WY+ +L RD   LN LGG D++RLLNILMQLRKVCNHPYLF+GAEPGPP+++GPH+WE+ GKM+LL KLLP+L+ QGSRVL+FCQMTR LDILE
Sbjct:   46 MTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILE 146

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: A0A813CIX4_9DINO (Smarca5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CIX4_9DINO)

HSP 1 Score: 165 bits (418), Expect = 2.350e-45
Identity = 75/101 (74.26%), Postives = 91/101 (90.10%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            MT +Q++WYK +L++DV  LN +GGP+++RLLNILMQLRKVCNHPYLF+GAEPGPP+ NGPHLWE++GKMVLL KLLPKL+ QGSRVL+F QMTR LDILE
Sbjct:  380 MTALQKEWYKRILSKDVITLNAIGGPERVRLLNILMQLRKVCNHPYLFEGAEPGPPYTNGPHLWESSGKMVLLHKLLPKLKQQGSRVLIFSQMTRQLDILE 480

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BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Match: A0A4D9D9D5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9D5_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.300e-45
Identity = 74/101 (73.27%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    1 MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILE 101
            MT MQR WY+ +L RD   LN LGG D++RLLNILMQLRKVCNHPYLF+GAEPGPP+++GPH+WE+ GKM+LL KLLP+L+ QGSRVL+FCQMTR LDILE
Sbjct:  552 MTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILE 652

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot

BLAST of mRNA_H-elongata_contig51463.12409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDI0_ECTSI	1.520e-60	99.01	Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A6H5KHP7_9PHAE	1.640e-60	99.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
W7U4M8_9STRA	1.480e-48	73.27	Swi snf matrix actin dependent regulator of subfam...	[more]
A0A7S1ZB35_TRICV	2.400e-48	71.29	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S1C7G7_9STRA	1.030e-47	76.24	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A7S3Q0P3_9STRA	5.070e-46	75.25	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S2SFZ0_9STRA	5.070e-46	75.25	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
I2CQP0_NANGC	1.750e-45	73.27	Atpase-like protein n=2 Tax=Nannochloropsis gadita...	[more]
A0A813CIX4_9DINO	2.350e-45	74.26	Smarca5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID...	[more]
A0A4D9D9D5_9STRA	3.300e-45	73.27	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..101 e-value: 4.0E-35 score: 123.3
None	No IPR available	PANTHER	PTHR10799	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED	coord: 1..101
None	No IPR available	PANTHER	PTHR10799:SF879	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 5	coord: 1..101
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig51463	contig	H-elongata_contig51463:382..2268 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig51463.12409.1	mRNA_H-elongata_contig51463.12409.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig51463 382..2286 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig51463.12409.1 ID=prot_H-elongata_contig51463.12409.1|Name=mRNA_H-elongata_contig51463.12409.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDG
AEPGPPFVNGPHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDIL
E

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase