prot_H-elongata_contig51230.12381.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51230.12381.1
Unique Nameprot_H-elongata_contig51230.12381.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length371
Homology
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: D7FK73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK73_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 4.070e-71
Identity = 176/270 (65.19%), Postives = 206/270 (76.30%), Query Frame = 0
Query:  100 LDGDIKLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIATAKLSATNARKAQTIERTRVTAREEEGGTDMRRRCNKMSKDFKDPSQLTGRIARRNQHFTEMWQEAR 369
            +D + +L +YECK++L GH+RSATC+SYGRLEL++GHEDGT++VWW STG IM+K KVHSGP+RQLQFDATK      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LRTWVWA++G +Q         DKYA++GPGDNL RLAKQ+N TVADI KWNGVRD RQLG+G+RLIV KGNP+EPT AE    K +A   R+++TIE+ R    E  G     RR         D S L GRIARR+  F+EMWQEAR
Sbjct: 1346 VDNEDELERYECKQRLAGHYRSATCVSYGRLELVSGHEDGTVVVWWASTGLIMMKSKVHSGPIRQLQFDATKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTWVWAARGPRQ---------DKYAVLGPGDNLSRLAKQNNTTVADIAKWNGVRDARQLGVGVRLIVAKGNPNEPTAAEKEAEKANAIKDRRSKTIEKARKKIAESTGVAGAYRRPRGALAPLDDSSSLIGRIARRDASFSEMWQEAR 1606          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A8J2T1R6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1R6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.100e-24
Identity = 159/332 (47.89%), Postives = 206/332 (62.05%), Query Frame = 0
Query:    3 WDVEERKR-------LLVLHGHEATVCSVVADEDKIVSGGADKGILIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASSLKKV-----ESTGYLDGDIKLGQYECKRKLT---GHHRSA----TCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIATAKLSATNARKAQ 315
            W++ E +R       L++L GHEA+V ++  D  K+VSGGAD  +++        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +   +V     ++   LD   +    + ++KL    G    A    T   +G LELI G  DG ++VWW   G I+ K K H GPV  LQFDA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TLR W+WA +       ++ ++ DK+ +   GD L  +A+Q+ +++ ++++WN + D R++  G RLIVQ GNPDEPT  E A AK  A+  R+ Q
Sbjct: 1407 WNLTEDERRGAMGRPLMLLEGHEASVTAIQVDTLKVVSGGADCKVILWSRATGIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLPDEADPSQVMGNDKKTKVALDALKRNRDIKTRKKLASGDGFELEAGPGLTVAKFGALELIGGLADGHVVVWWLQDGKILQKVKAHQGPVHDLQFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDNTLRQWLWAQES------DRGKVSDKFHVYDAGDTLVSIARQYGVSLPEVIRWNAIEDVRKVFPGTRLIVQPGNPDEPTGPEKALAKRQASKRRRNQ 1732          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A835YLC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLC2_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.480e-21
Identity = 70/225 (31.11%), Postives = 103/225 (45.78%), Query Frame = 0
Query:   93 KVESTGYLDGDIKLGQ-----YECKRKL-------TGHHRSA---TCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKG--AKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAE 300
            +V   G  DGDI++       YEC R++          HR+A   TC++YG LEL++GH DG ++VWW +TG +ML+             D T      +                                          TLR W + S+G  AKQ R+          ++  GDNL ++AK++ IT+  +++WNG+RD RQ+GIG RL+V KG+P   T AE
Sbjct: 1256 RVVIVGGADGDIRMWSEKKDGYECMRQMRATAKGGAAAHRTAVCVTCVAYGALELVSGHADGAVVVWWVATGMVMLRVXXXXXXXXXXXTDLTTGEPIMSLRGHTAAVASADG-----------------------------TLRYWSFVSEGGGAKQDRMH---------VMERGDNLAKVAKKYAITLQQLLRWNGIRDARQVGIGARLVVTKGDPTAMTAAE 1442          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A6U2P7Y6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2P7Y6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.340e-19
Identity = 59/214 (27.57%), Postives = 93/214 (43.46%), Query Frame = 0
Query:  100 LDGDIKLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------LRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIATAKLS 307
            L  D  L   +CK++L       T    G LE+I+GH DGT+++WW  TG I+ K   H+G VR L FD+T+ VSC +                                          +      L+ W W +   K          D+  +   GD L +L+K++ + + D++KWN + D  +L +G +L+V+K +P   T AE +  K S
Sbjct:  283 LHDDPLLTSVKCKKRLFHVDSKVTVARKGNLEIISGHGDGTIVIWWMKTGDILHKYNAHAGAVRALHFDSTRVVSCGSEMDIQIADSITGQLIQSLRSGEKNMKSTVHILGITFDSKQMLSVSADGKLKFWPWQTMEMKHK--------DRIHLFNKGDTLVKLSKEYGVAINDLMKWNDISDITKLFVGKKLVVKKADPTVLTDAERSALKKS 488          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A7S1U8T5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8T5_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.560e-18
Identity = 93/189 (49.21%), Postives = 120/189 (63.49%), Query Frame = 0
Query:  112 KRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAE 300
            + +L GH+   +C+ YGRLEL++G  DG + +WW  TG I+ K K                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++R W W SK   +A        DKY I   GD L  L+K + +++ DIV WNG+++ + L +G RL+VQKG+P +PT+AE
Sbjct: 1319 RSRLRGHYCPISCVRYGRLELVSGARDGHIFIWWLKTGAILRKCKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGSMRHWKWGSKFGARA--------DKYHIYDQGDTLVSLSKTYGVSLEDIVVWNGIKNAQDLYVGQRLLVQKGDPSKPTEAE 1499          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A482STY0_9ARCH (LysM domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STY0_9ARCH)

HSP 1 Score: 89.0 bits (219), Expect = 1.880e-15
Identity = 88/198 (44.44%), Postives = 121/198 (61.11%), Query Frame = 0
Query:  105 KLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIA 302
            K+   E  ++L GH    TC+ YG  E+++G + G + +WW  TGTI+    VH                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +R W W  + A Q         DK+ ++  G+ L  + K++ IT+  ++KWNG+ D +++  G++LIV+KG+P++PT AE A
Sbjct:  794 KVFHVESAQRLQGHTAPVTCVKYGNAEVVSGDQQGNIYIWWLKTGTILRTCTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNAIRYWQWGKRSAPQ---------DKHHVLEDGETLVAVGKKYEITLDQLLKWNGITDLKKVHTGMKLIVKKGDPNKPTDAERA 982          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A7S3JSW7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSW7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.580e-15
Identity = 90/190 (47.37%), Postives = 129/190 (67.89%), Query Frame = 0
Query:  123 TCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVW---------ASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDP-RQLGIGIRLIVQKGNPDEPTKAEIA 302
            T + YG LE+I G   G ++VWW +TG ++ + KVH+GPV+ +QFDA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++R W W         ++K AK+  +   E    Y  +   + L  LA++++++ +D+V+WN +++P + L  G++L+V K +P++ T+AE A
Sbjct:  168 TAIKYGSLEVIGGTASGEVVVWWLATGDVLTRSKVHNGPVKDIQFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSIRQWPWTRQNNENNESTKLAKKRTLLSGEALFDYHALKADETLADLAQKYHVSASDLVQWNAIKNPSKDLKPGMQLVVFKRDPNQLTEAEAA 357          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A7S4SCU9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SCU9_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.540e-12
Identity = 85/199 (42.71%), Postives = 114/199 (57.29%), Query Frame = 0
Query:  109 YECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIATAKLS 307
            ++ K +L       T + +G+LE+I+G   G + +WW  T   M + + H GPV               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LR W+W SK +           DK      G+ L  L++++++ + DI KWNG+ D +++  G +LIV+KGN D PT AE+A  K S
Sbjct:  835 FKYKHRLRCPKCKITAIQFGQLEIISGDNHGWVSIWWIKTSENMRRCQAHHGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSVDGILRQWMWGSKSSCGRG-------DKIHTFQVGETLPNLSQKYDVAIPDIFKWNGIADAKKMYQGQKLIVRKGNADLPTAAELAAQKKS 1026          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: B8C8Z1_THAPS (Fibronectin type-III domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8Z1_THAPS)

HSP 1 Score: 69.3 bits (168), Expect = 4.770e-9
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 0
Query:  109 YECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCS 176
            Y C ++L   + + T L YG LE+ITG   G + +WW  TG ++   KVH   V  LQ DATKAVSCS
Sbjct: 1004 YTCHQRLVLGNGNVTALQYGELEVITGDSLGNISIWWIETGKLLQSCKVHDSRVTALQVDATKAVSCS 1071          
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: K0S1W5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S1W5_THAOC)

HSP 1 Score: 56.6 bits (135), Expect = 5.480e-5
Identity = 41/161 (25.47%), Postives = 65/161 (40.37%), Query Frame = 0
Query:   16 GHEATVCSVVADEDKIVSGGADKGILIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASSLKKVESTGYLDGDIK--LGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVS 174
            GHEA V S+  D+ +++SGGADK ILI                                             ++S   +     + GD    + Q +CK +L+     AT L Y +LEL+ G   G +   W  +G I+   +VH G +  L+  +T A++
Sbjct:  969 GHEAAVTSISGDDKRVISGGADKLILIWNAVSGNLLYRVPGHSRGIHHIRVGPDWFV---------------SASFGNIFVWDVVSGDGLGVVNQVDCKSRLSLDSGDATALHYNKLELVCGDSIGKVSTMWIESGEIVQSSQVHEGKITCLEVSSTWAIT 1114          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FK73_ECTSI4.070e-7165.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2T1R6_9STRA2.100e-2447.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835YLC2_9STRA3.480e-2131.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U2P7Y6_9STRA4.340e-1927.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1U8T5_9STRA7.560e-1849.21Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A482STY0_9ARCH1.880e-1544.44LysM domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S3JSW7_9STRA3.580e-1547.37Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4SCU9_9STRA3.540e-1242.71Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8C8Z1_THAPS4.770e-947.06Fibronectin type-III domain-containing protein n=1... [more]
K0S1W5_THAOC5.480e-525.47Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 148..185
e-value: 1.5
score: 16.0
coord: 188..225
e-value: 2.1E-5
score: 34.0
coord: 108..145
e-value: 0.35
score: 19.9
coord: 47..84
e-value: 4.7E-4
score: 29.5
coord: 7..44
e-value: 9.5E-4
score: 28.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 110..144
e-value: 0.005
score: 17.7
coord: 189..224
e-value: 3.5E-4
score: 21.3
coord: 48..83
e-value: 2.9E-4
score: 21.6
coord: 10..44
e-value: 0.019
score: 15.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 54..93
score: 11.31
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 14..53
score: 11.478
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 195..224
score: 11.478
IPR018392LysM domainSMARTSM00257LysM_2coord: 245..289
e-value: 2.0E-5
score: 34.0
IPR018392LysM domainPFAMPF01476LysMcoord: 248..288
e-value: 6.6E-7
score: 29.3
IPR018392LysM domainPROSITEPS51782LYSMcoord: 244..288
score: 12.811
IPR036779LysM domain superfamilyGENE3D3.10.350.10coord: 245..295
e-value: 2.6E-9
score: 38.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..244
e-value: 6.9E-48
score: 164.8
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 109..230
coord: 1..226
NoneNo IPR availableSUPERFAMILY54106LysM domaincoord: 245..288
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..234
score: 35.277
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51230contigH-elongata_contig51230:121..3028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51230.12381.1mRNA_H-elongata_contig51230.12381.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51230 121..3028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51230.12381.1 ID=prot_H-elongata_contig51230.12381.1|Name=mRNA_H-elongata_contig51230.12381.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp
KVWDVEERKRLLVLHGHEATVCSVVADEDKIVSGGADKGILIWDPTDGRL
LRVLRGHTKSVVSLYSGPSFILSGCADGEVRVWGATKASSLKKVESTGYL
DGDIKLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGT
IMLKRKVHSGPVRQLQFDATKAVSCSTDGVIAVTDLTTGDCTMSLRGHKG
TILAVAFDKSKIISASDDGTLRTWVWASKGAKQARIEKNELWDKYAIVGP
GDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAE
IATAKLSATNARKAQTIERTRVTAREEEGGTDMRRRCNKMSKDFKDPSQL
TGRIARRNQHFTEMWQEARR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR018392LysM_dom
IPR036779LysM_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf