mRNA_H-elongata_contig51230.12381.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51230.12381.1
Unique NamemRNA_H-elongata_contig51230.12381.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: D7FK73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK73_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 4.070e-71
Identity = 176/270 (65.19%), Postives = 206/270 (76.30%), Query Frame = 1 
Query:  298 LDGDIKLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIATAKLSATNARKAQTIERTRVTAREEEGGTDMRRRCNKMSKDFKDPSQLTGRIARRNQHFTEMWQEAR 1107
            +D + +L +YECK++L GH+RSATC+SYGRLEL++GHEDGT++VWW STG IM+K KVHSGP+RQLQFDATK      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LRTWVWA++G +Q         DKYA++GPGDNL RLAKQ+N TVADI KWNGVRD RQLG+G+RLIV KGNP+EPT AE    K +A   R+++TIE+ R    E  G     RR         D S L GRIARR+  F+EMWQEAR
Sbjct: 1346 VDNEDELERYECKQRLAGHYRSATCVSYGRLELVSGHEDGTVVVWWASTGLIMMKSKVHSGPIRQLQFDATKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTWVWAARGPRQ---------DKYAVLGPGDNLSRLAKQNNTTVADIAKWNGVRDARQLGVGVRLIVAKGNPNEPTAAEKEAEKANAIKDRRSKTIEKARKKIAESTGVAGAYRRPRGALAPLDDSSSLIGRIARRDASFSEMWQEAR 1606
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BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A8J2T1R6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1R6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.100e-24
Identity = 159/332 (47.89%), Postives = 206/332 (62.05%), Query Frame = 1 
Query:    7 WDVEERKR-------LLVLHGHEATVCSVVADEDKIVSGGADKGILIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASSLKKV-----ESTGYLDGDIKLGQYECKRKLT---GHHRSA----TCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIATAKLSATNARKAQ 945
            W++ E +R       L++L GHEA+V ++  D  K+VSGGAD  +++        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +   +V     ++   LD   +    + ++KL    G    A    T   +G LELI G  DG ++VWW   G I+ K K H GPV  LQFDA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TLR W+WA +       ++ ++ DK+ +   GD L  +A+Q+ +++ ++++WN + D R++  G RLIVQ GNPDEPT  E A AK  A+  R+ Q
Sbjct: 1407 WNLTEDERRGAMGRPLMLLEGHEASVTAIQVDTLKVVSGGADCKVILWSRATGIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLPDEADPSQVMGNDKKTKVALDALKRNRDIKTRKKLASGDGFELEAGPGLTVAKFGALELIGGLADGHVVVWWLQDGKILQKVKAHQGPVHDLQFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDNTLRQWLWAQES------DRGKVSDKFHVYDAGDTLVSIARQYGVSLPEVIRWNAIEDVRKVFPGTRLIVQPGNPDEPTGPEKALAKRQASKRRRNQ 1732
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BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A835YLC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLC2_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.480e-21
Identity = 70/225 (31.11%), Postives = 103/225 (45.78%), Query Frame = 1 
Query:  277 KVESTGYLDGDIKLGQ-----YECKRKL-------TGHHRSA---TCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKG--AKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAE 900
            +V   G  DGDI++       YEC R++          HR+A   TC++YG LEL++GH DG ++VWW +TG +ML+             D T      +                                          TLR W + S+G  AKQ R+          ++  GDNL ++AK++ IT+  +++WNG+RD RQ+GIG RL+V KG+P   T AE
Sbjct: 1256 RVVIVGGADGDIRMWSEKKDGYECMRQMRATAKGGAAAHRTAVCVTCVAYGALELVSGHADGAVVVWWVATGMVMLRVXXXXXXXXXXXTDLTTGEPIMSLRGHTAAVASADG-----------------------------TLRYWSFVSEGGGAKQDRMH---------VMERGDNLAKVAKKYAITLQQLLRWNGIRDARQVGIGARLVVTKGDPTAMTAAE 1442
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BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A6U2P7Y6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2P7Y6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.340e-19
Identity = 59/214 (27.57%), Postives = 93/214 (43.46%), Query Frame = 1 
Query:  298 LDGDIKLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------LRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIATAKLS 921
            L  D  L   +CK++L       T    G LE+I+GH DGT+++WW  TG I+ K   H+G VR L FD+T+ VSC +                                          +      L+ W W +   K          D+  +   GD L +L+K++ + + D++KWN + D  +L +G +L+V+K +P   T AE +  K S
Sbjct:  283 LHDDPLLTSVKCKKRLFHVDSKVTVARKGNLEIISGHGDGTIVIWWMKTGDILHKYNAHAGAVRALHFDSTRVVSCGSEMDIQIADSITGQLIQSLRSGEKNMKSTVHILGITFDSKQMLSVSADGKLKFWPWQTMEMKHK--------DRIHLFNKGDTLVKLSKEYGVAINDLMKWNDISDITKLFVGKKLVVKKADPTVLTDAERSALKKS 488
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BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: A0A482STY0_9ARCH (LysM domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STY0_9ARCH)

HSP 1 Score: 89.0 bits (219), Expect = 1.880e-15
Identity = 88/198 (44.44%), Postives = 121/198 (61.11%), Query Frame = 1 
Query:  313 KLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVSCSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRTWVWASKGAKQARIEKNELWDKYAIVGPGDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAEIA 906
            K+   E  ++L GH    TC+ YG  E+++G + G + +WW  TGTI+    VH                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +R W W  + A Q         DK+ ++  G+ L  + K++ IT+  ++KWNG+ D +++  G++LIV+KG+P++PT AE A
Sbjct:  794 KVFHVESAQRLQGHTAPVTCVKYGNAEVVSGDQQGNIYIWWLKTGTILRTCTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNAIRYWQWGKRSAPQ---------DKHHVLEDGETLVAVGKKYEITLDQLLKWNGITDLKKVHTGMKLIVKKGDPNKPTDAERA 982
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BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Match: K0S1W5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S1W5_THAOC)

HSP 1 Score: 56.6 bits (135), Expect = 5.480e-5
Identity = 41/161 (25.47%), Postives = 65/161 (40.37%), Query Frame = 1 
Query:   46 GHEATVCSVVADEDKIVSGGADKGILIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASSLKKVESTGYLDGDIK--LGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGTIMLKRKVHSGPVRQLQFDATKAVS 522
            GHEA V S+  D+ +++SGGADK ILI                                             ++S   +     + GD    + Q +CK +L+     AT L Y +LEL+ G   G +   W  +G I+   +VH G +  L+  +T A++
Sbjct:  969 GHEAAVTSISGDDKRVISGGADKLILIWNAVSGNLLYRVPGHSRGIHHIRVGPDWFV---------------SASFGNIFVWDVVSGDGLGVVNQVDCKSRLSLDSGDATALHYNKLELVCGDSIGKVSTMWIESGEIVQSSQVHEGKITCLEVSSTWAIT 1114
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51230.12381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FK73_ECTSI4.070e-7165.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2T1R6_9STRA2.100e-2447.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835YLC2_9STRA3.480e-2131.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U2P7Y6_9STRA4.340e-1927.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A482STY0_9ARCH1.880e-1544.44LysM domain-containing protein n=1 Tax=archaeon Ta... [more]
K0S1W5_THAOC5.480e-525.47Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51230contigH-elongata_contig51230:121..3028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.8
Seed ortholog evalue3.2e-65
Seed eggNOG ortholog2880.D7FK73
KEGG koko:K10260,ko:K10265,ko:K10266
KEGG Pathwayko04120,map04120
KEGG ModuleM00387
EggNOG free text desc.SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
EggNOG OGsKOG0274@1,KOG0274@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFibronectin type III
Ec32 orthologEc-17_002980.1
Exons8
Model size1113
Cds size1113
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51230.12381.1prot_H-elongata_contig51230.12381.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51230 121..3028 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930838.6517096-CDS-H-elongata_contig51230:120..2341622930838.6517096-CDS-H-elongata_contig51230:120..234Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 121..234 +
1691679592.0477777-CDS-H-elongata_contig51230:120..2341691679592.0477777-CDS-H-elongata_contig51230:120..234Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 121..234 +
1622930838.672678-CDS-H-elongata_contig51230:774..8591622930838.672678-CDS-H-elongata_contig51230:774..859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 775..859 +
1691679592.0619621-CDS-H-elongata_contig51230:774..8591691679592.0619621-CDS-H-elongata_contig51230:774..859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 775..859 +
1622930838.6888165-CDS-H-elongata_contig51230:1224..14401622930838.6888165-CDS-H-elongata_contig51230:1224..1440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 1225..1440 +
1691679592.071817-CDS-H-elongata_contig51230:1224..14401691679592.071817-CDS-H-elongata_contig51230:1224..1440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 1225..1440 +
1622930838.7051547-CDS-H-elongata_contig51230:1604..17021622930838.7051547-CDS-H-elongata_contig51230:1604..1702Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 1605..1702 +
1691679592.0818157-CDS-H-elongata_contig51230:1604..17021691679592.0818157-CDS-H-elongata_contig51230:1604..1702Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 1605..1702 +
1622930838.7228124-CDS-H-elongata_contig51230:1967..21801622930838.7228124-CDS-H-elongata_contig51230:1967..2180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 1968..2180 +
1691679592.0945892-CDS-H-elongata_contig51230:1967..21801691679592.0945892-CDS-H-elongata_contig51230:1967..2180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 1968..2180 +
1622930838.7375796-CDS-H-elongata_contig51230:2358..25031622930838.7375796-CDS-H-elongata_contig51230:2358..2503Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 2359..2503 +
1691679592.1085374-CDS-H-elongata_contig51230:2358..25031691679592.1085374-CDS-H-elongata_contig51230:2358..2503Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 2359..2503 +
1622930838.7634127-CDS-H-elongata_contig51230:2646..27821622930838.7634127-CDS-H-elongata_contig51230:2646..2782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 2647..2782 +
1691679592.1224349-CDS-H-elongata_contig51230:2646..27821691679592.1224349-CDS-H-elongata_contig51230:2646..2782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 2647..2782 +
1622930838.8214853-CDS-H-elongata_contig51230:2922..30281622930838.8214853-CDS-H-elongata_contig51230:2922..3028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 2923..3028 +
1691679592.1315467-CDS-H-elongata_contig51230:2922..30281691679592.1315467-CDS-H-elongata_contig51230:2922..3028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51230 2923..3028 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51230.12381.1

>prot_H-elongata_contig51230.12381.1 ID=prot_H-elongata_contig51230.12381.1|Name=mRNA_H-elongata_contig51230.12381.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp
KVWDVEERKRLLVLHGHEATVCSVVADEDKIVSGGADKGILIWDPTDGRL
LRVLRGHTKSVVSLYSGPSFILSGCADGEVRVWGATKASSLKKVESTGYL
DGDIKLGQYECKRKLTGHHRSATCLSYGRLELITGHEDGTLIVWWTSTGT
IMLKRKVHSGPVRQLQFDATKAVSCSTDGVIAVTDLTTGDCTMSLRGHKG
TILAVAFDKSKIISASDDGTLRTWVWASKGAKQARIEKNELWDKYAIVGP
GDNLGRLAKQHNITVADIVKWNGVRDPRQLGIGIRLIVQKGNPDEPTKAE
IATAKLSATNARKAQTIERTRVTAREEEGGTDMRRRCNKMSKDFKDPSQL
TGRIARRNQHFTEMWQEARR*
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mRNA from alignment at H-elongata_contig51230:121..3028+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51230.12381.1 ID=mRNA_H-elongata_contig51230.12381.1|Name=mRNA_H-elongata_contig51230.12381.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2908bp|location=Sequence derived from alignment at H-elongata_contig51230:121..3028+ (Himanthalia elongata Himel1 dioecious)
AAGGTGTGGGACGTGGAGGAGAGGAAGCGCCTTCTTGTCCTACACGGACA
CGAAGCGACAGTTTGCAGCGTGGTTGCGGACGAGGACAAGATTGTTTCGG
GAGGGGCAGACAAGGTGAGACCCTGTGGTATGGACTGTACGCCTGATCTT
GCGGCCTAGTTTATTGGCACATCATGTTCCATAAGGAGGCGTTATGGAGA
CACTTCCTGAAGATTGCGGCATTTTTTCATGGGTGGGTGCGTTTTCGGAT
CCCGCTGAATGCTACAGTTCTAGAGCCTATATTACGGTATTATTTGAAAT
TACACCACGACTCTAAACGATTTATGCCAAGAGACTAGCCCAAGAAATCG
CACCGTATGGAAGAGTTCAGATGAACAGACGACGATTGTGATGCTTGAAA
AGCACCGGTTCCATGTTTTTTTATGCTGCAGAAAAACGCATTTTTTTTTA
ATATCGAAGCGCTATAAACTTTCTTAGGCAATAACTAGTTAGTTTGAAAC
CGACGATGTAAAGCCATCCGAATACAATAGCCCTGATCAATGGAGCAAGT
CTTTGTTACGAACATTACCTCTCTGATTACGTTGACATCCCGCCCGGTCA
AACTTCATTACAATGTAAGATGTCATCCCCCCCAAAACTCCGTTTTGAGC
ACAGGGAATCCTGATTTGGGATCCCACCGACGGTAGGCTTCTCAGGGTGC
TGCGTGGGCATACGAAAAGCGTCGTGTCTTTATATAGTGGTGAGCATCAG
AAACACGTACTGGATAAAGACCACGCATGGATATCTCAGTCAGGTCTCGT
CGAGGAGTATGAACAAAATATTTGGTTACGCATAAGGTGCACTGAAACCG
TCTTCTTGTATGGAAACAAATCACCACCACCATCTGATCATACCCCCCTA
ACACGCCTTTGTATTGATACGGGGACATAGTCCTTCGAAAAATGGATATG
CATATTCTTGCGTAGAGTACTCATTTGTCACAAGTAGAGCACGATGCATG
GAGTTCTACCCAGCTGCAGTGGTGCCTGCTTGGCAACTTGTGGCTACCTG
GATAATGGTGTTGACGAAAGCATTATCATCGTACCCATTTTGATCGTCGA
AAAGGTCCATCCTTCATTCTGAGTGGCTGTGCTGACGGCGAGGTTCGTGT
CTGGGGCGCGACAAAGGCTTCCAGTTTAAAGAAGGTCGAGAGCACCGGGT
ATCTAGACGGAGATATAAAGTTGGGGCAGTATGAGTGCAAGCGGAAACTG
ACAGGTCATCACCGCTCAGCAACGTGTTTGTCGTATGGCCGTCTGGAGCT
GATCACTGGTCACGAGGACGGTGAGTGCATGTTTGTTTCACCAATGCCCT
TTTGAGTTGGCCGCTAGTGCTTACGTCGGCGTCACCCTGTGAAAATAGCC
CGCTGCCTCGTTTATGGCGGAAATCTAGAAAATAAAGTACTAATGACGCT
TCGATATATGCCAATATTACATCAATGACGGTAGGTACTTTGATTGTGTG
GTGGACATCGACGGGAACGATCATGTTAAAGAGAAAGGTACACTCAGGGC
CTGTTCGACAGCTTCAGTTCGACGCGACCAAGGTGTGCTACTAGAGCCTA
CTGTATTAAACATGAATGGTTTCTATCGTCGGTGCCCCTGGAGCTCACGT
TTTCGCGTTAGCGAAATGATAGTTTGGCAAAAAGTTTTCGCGAAGTAATG
CGCGAGTTATTGAGTCCGCCCTCATCCTACTTGCACCAATCCATCGCAAT
GTTTATGACCAATAACGCTGACCGCCTTGACTCTGGGTGGCTAGCGATTC
CGAGTGGGCTTACCTCTCGTGCGCCTGCCTTTACCTAACCAATCAAGGCG
GTCTCCTGCAGTACAGATGGGGTAATTGCCGTCACAGATCTGACGACCGG
GGATTGCACTATGAGTCTCAGGGGTCACAAGGGCACAATCTTAGCCGTGG
CATTCGACAAGTCCAAGATAATTAGTGCCAGCGACGACGGTACGCTCAGG
ACCTGGGTATGGGCCTCTAAAGGCGCGAAACAGGCGAGAATTGAAAAAAA
TGAATTGTGGGTTCTCCCAAAGGACTGGGGACCGGCATGGTCACGAAATG
GTAATCCCATACGACGATATATCATTTTTGGCCTGGGTTCAAGGACAGAG
ACGAAGTTGGCGTCACTGTACCTTAATCTACCCAGAATCACGACATTGAT
TTCACTCGTACTCGGATCATGGGAACGACCCTCGACAGGATAAGTATGCT
ATTGTGGGCCCCGGCGACAATCTCGGTCGACTCGCCAAGCAGCACAATAT
TACCGTTGCGGACATCGTTAAGTGGAACGGGGTGAGAGATCCGCGGCAGC
TTGGGATTGGCATTCGGCTCATCGTACAGAAAGGTATTGGAAGGTCTATC
AGCCCACGTTGTCGACGGGATTACGAATTATAGCAAACTGTATCGACTTA
TATTTCGGGCTTTCCTGCTCAATTTCAATGTACAGAAATCGACAATGTGT
CTCCCGTCACTTTTCAACACCCGAAGGAAACCCGGACGAGCCCACTAAGG
CGGAAATAGCAACGGCAAAATTGAGCGCCACCAACGCGAGAAAAGCCCAG
ACTATTGAGCGGACCAGAGTCACGGCTCGAGAAGAGGAGGGCGGGACAGA
TATGCGACGTCGGTAAGCGAAGATGTCTACTCCTCGTCCACGAACCTCTT
AAGAGGATAATATATCTTAAATTTATGCCCATCGCACCTCGCTCAACTTG
CAGCACTCGCCTGCGTTACGACCGTATTGCTCGTGTTGCTCGTGATGCCC
AGATGCAACAAGATGTCAAAAGATTTCAAAGATCCTTCTCAACTTACTGG
GCGTATAGCCAGGAGAAATCAACACTTCACGGAAATGTGGCAGGAGGCTA
GACGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig51230:121..3028+

>mRNA_H-elongata_contig51230.12381.1 ID=mRNA_H-elongata_contig51230.12381.1|Name=mRNA_H-elongata_contig51230.12381.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2226bp|location=Sequence derived from alignment at H-elongata_contig51230:121..3028+ (Himanthalia elongata Himel1 dioecious)
AAGGTGTGGGACGTGGAGGAGAGGAAGCGCCTTCTTGTCCTACACGGACA
CGAAGCGACAGTTTGCAGCGTGGTTGCGGACGAGGACAAGATTGTTTCGG
GAGGGGCAGACAAGAAGGTGTGGGACGTGGAGGAGAGGAAGCGCCTTCTT
GTCCTACACGGACACGAAGCGACAGTTTGCAGCGTGGTTGCGGACGAGGA
CAAGATTGTTTCGGGAGGGGCAGACAAGGGAATCCTGATTTGGGATCCCA
CCGACGGTAGGCTTCTCAGGGTGCTGCGTGGGCATACGAAAAGCGTCGTG
TCTTTATATAGTGGGAATCCTGATTTGGGATCCCACCGACGGTAGGCTTC
TCAGGGTGCTGCGTGGGCATACGAAAAGCGTCGTGTCTTTATATAGTGGT
CCATCCTTCATTCTGAGTGGCTGTGCTGACGGCGAGGTTCGTGTCTGGGG
CGCGACAAAGGCTTCCAGTTTAAAGAAGGTCGAGAGCACCGGGTATCTAG
ACGGAGATATAAAGTTGGGGCAGTATGAGTGCAAGCGGAAACTGACAGGT
CATCACCGCTCAGCAACGTGTTTGTCGTATGGCCGTCTGGAGCTGATCAC
TGGTCACGAGGACGGTCCATCCTTCATTCTGAGTGGCTGTGCTGACGGCG
AGGTTCGTGTCTGGGGCGCGACAAAGGCTTCCAGTTTAAAGAAGGTCGAG
AGCACCGGGTATCTAGACGGAGATATAAAGTTGGGGCAGTATGAGTGCAA
GCGGAAACTGACAGGTCATCACCGCTCAGCAACGTGTTTGTCGTATGGCC
GTCTGGAGCTGATCACTGGTCACGAGGACGGTACTTTGATTGTGTGGTGG
ACATCGACGGGAACGATCATGTTAAAGAGAAAGGTACACTCAGGGCCTGT
TCGACAGCTTCAGTTCGACGCGACCAAGGTACTTTGATTGTGTGGTGGAC
ATCGACGGGAACGATCATGTTAAAGAGAAAGGTACACTCAGGGCCTGTTC
GACAGCTTCAGTTCGACGCGACCAAGGCGGTCTCCTGCAGTACAGATGGG
GTAATTGCCGTCACAGATCTGACGACCGGGGATTGCACTATGAGTCTCAG
GGGTCACAAGGGCACAATCTTAGCCGTGGCATTCGACAAGTCCAAGATAA
TTAGTGCCAGCGACGACGGTACGCTCAGGACCTGGGTATGGGCCTCTAAA
GGCGCGAAACAGGCGAGAATTGAAAAAAATGAATTGTGGGCGGTCTCCTG
CAGTACAGATGGGGTAATTGCCGTCACAGATCTGACGACCGGGGATTGCA
CTATGAGTCTCAGGGGTCACAAGGGCACAATCTTAGCCGTGGCATTCGAC
AAGTCCAAGATAATTAGTGCCAGCGACGACGGTACGCTCAGGACCTGGGT
ATGGGCCTCTAAAGGCGCGAAACAGGCGAGAATTGAAAAAAATGAATTGT
GGGATAAGTATGCTATTGTGGGCCCCGGCGACAATCTCGGTCGACTCGCC
AAGCAGCACAATATTACCGTTGCGGACATCGTTAAGTGGAACGGGGTGAG
AGATCCGCGGCAGCTTGGGATTGGCATTCGGCTCATCGTACAGAAAGGAT
AAGTATGCTATTGTGGGCCCCGGCGACAATCTCGGTCGACTCGCCAAGCA
GCACAATATTACCGTTGCGGACATCGTTAAGTGGAACGGGGTGAGAGATC
CGCGGCAGCTTGGGATTGGCATTCGGCTCATCGTACAGAAAGGAAACCCG
GACGAGCCCACTAAGGCGGAAATAGCAACGGCAAAATTGAGCGCCACCAA
CGCGAGAAAAGCCCAGACTATTGAGCGGACCAGAGTCACGGCTCGAGAAG
AGGAGGGCGGGACAGATATGCGACGTCGGAAACCCGGACGAGCCCACTAA
GGCGGAAATAGCAACGGCAAAATTGAGCGCCACCAACGCGAGAAAAGCCC
AGACTATTGAGCGGACCAGAGTCACGGCTCGAGAAGAGGAGGGCGGGACA
GATATGCGACGTCGATGCAACAAGATGTCAAAAGATTTCAAAGATCCTTC
TCAACTTACTGGGCGTATAGCCAGGAGAAATCAACACTTCACGGAAATGT
GGCAGGAGGCTAGACGGTGAATGCAACAAGATGTCAAAAGATTTCAAAGA
TCCTTCTCAACTTACTGGGCGTATAGCCAGGAGAAATCAACACTTCACGG
AAATGTGGCAGGAGGCTAGACGGTGA
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