prot_H-elongata_contig51140.12373.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51140.12373.1
Unique Nameprot_H-elongata_contig51140.12373.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length248
Homology
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: D7FZL6_ECTSI (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL6_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 3.350e-147
Identity = 226/237 (95.36%), Postives = 232/237 (97.89%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADEMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKHSAAQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQV 237
            RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEK+ATNSRKKAD+MSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTN+KLEHVYHATCIKAFNFCR   TYERTTELRRLCDTLRQHISNLQKHSAAQTT+RLRGWEGW +D IELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQ+
Sbjct:   41 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKKATNSRKKADQMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCR---TYERTTELRRLCDTLRQHISNLQKHSAAQTTNRLRGWEGWTSDGIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQI 274          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A836CG33_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG33_9STRA)

HSP 1 Score: 377 bits (969), Expect = 7.960e-121
Identity = 185/237 (78.06%), Postives = 210/237 (88.61%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADEMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKHSAAQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQV 237
            RRYK WQ AYET+M+K++DLCV+LQ+HR+AKDGLHQYRNMAQQQAPGSLEVII +L+D +E RATN++ KA+ +S  E  ++GDLEAEA+PESIMLSTMTEEG KER DRE+VVPWLKFLWE YRAVLDILKTN+KLEHVYH TCIKAFNFCR   TY RTTE RRLCDTLRQHISNLQ+H+ A   +RLRGWEGW ++ IELHLQTRFAQLEVAA LELWTEGFRTVEDIYNIMQ+
Sbjct:   39 RRYKQWQKAYETLMIKFLDLCVELQRHREAKDGLHQYRNMAQQQAPGSLEVIITHLLDMSEGRATNAKMKANAISAEEVTQIGDLEAEASPESIMLSTMTEEGGKERTDREVVVPWLKFLWEAYRAVLDILKTNTKLEHVYHNTCIKAFNFCR---TYARTTEFRRLCDTLRQHISNLQRHTGAAAATRLRGWEGWTSEGIELHLQTRFAQLEVAANLELWTEGFRTVEDIYNIMQI 272          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A6V1NAU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAU3_HETAK)

HSP 1 Score: 318 bits (815), Expect = 2.230e-105
Identity = 158/239 (66.11%), Postives = 193/239 (80.75%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADEMSL-VEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKHSAAQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVS 238
            RRYKTWQ  YET+M+ YMDLCV LQ+H  AKDGLHQYRNM+QQQAPGSLE++IN+LVD AE RA  ++  A   +   E A+V DLEAE++PE+I+LSTMTEEGE+ER +R +VVPWLKFLWETYRAVLDIL++NSKLEHVYH TC KAF FC +     R  E RRLC+T+RQH+ +LQKH A  T  RLRGW+G+  +S+ELHLQTRFAQL+ A  LE+WTE FRT+EDIY+IMQ++
Sbjct:   39 RRYKTWQKVYETMMVAYMDLCVDLQEHLFAKDGLHQYRNMSQQQAPGSLELVINHLVDAAEARAAQAQATAXXAAAQTECAQVADLEAESSPEAILLSTMTEEGEQERRERAVVVPWLKFLWETYRAVLDILRSNSKLEHVYHGTCRKAFAFCGK---NRRMLEFRRLCETMRQHVGHLQKHVAQHTAQRLRGWDGFTPESVELHLQTRFAQLKAATALEVWTEAFRTIEDIYSIMQIN 274          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: F0XXZ4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXZ4_AURAN)

HSP 1 Score: 316 bits (809), Expect = 5.280e-101
Identity = 156/239 (65.27%), Postives = 194/239 (81.17%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADEMSLVEAAK-VGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKHSAAQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVS 238
            ++ +TW   +E+IM +Y+D+CV+LQ HR AKDGLHQYRN++QQQAP SLEV+I YLV  AE RA  +   A + +L  AAK V DL+ E TPESIM+STMT+EG+ ER++RE +VPWLKFLWETYR+VLDIL+TNSKLE VYH T +KAF FCR+   +ER TELRRLC+TLRQH+SNLQ+ +A   TSRLRGWEGW  + +E+HL TRFAQLEVA+ LELWTEGFRTVEDI+ IM++S
Sbjct:   33 KKSRTWVKVFESIMFRYIDICVELQMHRHAKDGLHQYRNISQQQAPQSLEVVIQYLVKAAETRAYEAAAAAKKANLAAAAKSVADLDCEQTPESIMMSTMTDEGDGERSEREALVPWLKFLWETYRSVLDILRTNSKLEKVYHGTSVKAFEFCRK---FERKTELRRLCETLRQHLSNLQRAAATNNTSRLRGWEGWTQEGVEMHLTTRFAQLEVASALELWTEGFRTVEDIHQIMRIS 268          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A7S3ZQV0_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQV0_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.500e-89
Identity = 147/238 (61.76%), Postives = 185/238 (77.73%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADEMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKHSAAQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVS 238
            ++ +TW    E+IMLKY+D+ V L+ HR AKDGLHQYRN++QQQAP SLE II +L+   E R   + K+A  M+L +   V DLE E TPE+IMLSTMT+EG+ +R++RE++VPWLKFLWETYR+VLDILKTNSKLE VYH T  +AF FC Q   +ER TE+RRLC+TLR H+SNLQ+ +A   T+RLRGWEGW  + IELHL TRFAQLE A+  ELWTEGFRTVEDI+ +M++S
Sbjct:   39 KKSRTWVKVLESIMLKYIDIAVDLKLHRHAKDGLHQYRNISQQQAPQSLEAIIQHLLKAGESRVAKAAKEARSMNLGKGKAVADLECEQTPEAIMLSTMTDEGDGDRSEREVLVPWLKFLWETYRSVLDILKTNSKLEKVYHQTAQRAFEFCVQ---HERKTEMRRLCETLRHHLSNLQRATAQGNTNRLRGWEGWTQEGIELHLATRFAQLEAASAQELWTEGFRTVEDIHQVMRIS 273          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A6H5KUY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY2_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 4.200e-86
Identity = 135/146 (92.47%), Postives = 139/146 (95.21%), Query Frame = 0
Query:   14 MLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADE------MSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCR 153
            MLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEV+INYLVDQAEK+ATNSRKKAD+      MSLVEA KVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTN+KLEHVYHATCIKAFNFCR
Sbjct:    1 MLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVVINYLVDQAEKKATNSRKKADQVPGKVQMSLVEATKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNTKLEHVYHATCIKAFNFCR 146          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A7S2R6Z3_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Z3_9STRA)

HSP 1 Score: 285 bits (728), Expect = 4.670e-86
Identity = 140/241 (58.09%), Postives = 185/241 (76.76%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADEMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKHSA---AQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVS 238
            R+ +TWQ +YET+MLKY+DLCV+L+   + KDGLHQYRNM+Q QAPGSLEV++ + +D AE R   +   A+  +L EA ++ D+E   TPES+MLSTMT++ +++R DR++++PWL FLWETYR+VLDILKTNSKLE VYH T  +AF FC +   Y+R  E RRLCD LR H+SNLQK+++   A    RL+ W+GW ++SIELHLQTRF QLE  A LELWTEGF+TVEDI+ IMQ++
Sbjct:   39 RKPRTWQKSYETVMLKYIDLCVELRDPIRGKDGLHQYRNMSQAQAPGSLEVVVTHFIDLAESRLAKAADTAEAAALREAERMTDIEQAGTPESVMLSTMTDDSDRKRTDRQILIPWLLFLWETYRSVLDILKTNSKLELVYHNTAARAFAFCEK---YKRRLEFRRLCDLLRLHLSNLQKYASGPNAANDKRLKVWDGWTDESIELHLQTRFRQLETTAKLELWTEGFKTVEDIHGIMQIN 276          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A7S3K207_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K207_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.190e-85
Identity = 139/241 (57.68%), Postives = 185/241 (76.76%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADEMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQK---HSAAQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVS 238
            ++ +T+    + IMLKY+DLC++LQ HR AKDGLHQYRN+ QQQAP SLE++I +L++ AE +   +   + +   +   ++ DL+ E TPESIMLSTMTEEG+ ER +RE++VPWLKF WETYR+VLDILKTNSKLE +YH T +KAF+FC++   +ER TELRRLCDTLRQH++NLQ+    +    +S+ RGWEGW  + +ELHL TRFAQLE A+ LELWTE FRTVEDI+ +M++S
Sbjct:   39 KKSRTYVPVLQDIMLKYLDLCIELQLHRHAKDGLHQYRNITQQQAPQSLEIVIKHLIEAAENKTNQAAASSKKYKAI--LEIADLDNEQTPESIMLSTMTEEGDAERTEREILVPWLKFSWETYRSVLDILKTNSKLEKIYHETSVKAFDFCKR---FERKTELRRLCDTLRQHLANLQRAAQQAPGTQSSKFRGWEGWTQEGVELHLTTRFAQLEAASKLELWTEAFRTVEDIHAVMKIS 274          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A448Z9Q6_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9Q6_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.240e-81
Identity = 141/253 (55.73%), Postives = 188/253 (74.31%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKADE---------MSLVEAAKVGDLEAEAT--PESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKH----SAAQTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVS 238
            RR++TW   YE IM+ Y++LC++L + R+AKDGLHQYRN+AQ QAPGSLE +I YL+++AE +   ++  AD          +S++E A   D E E+   P++I+LS+MT +  K + D  ++VP LKFLWE YRA+LDIL++NSKLEHVYHAT + AF FCR    Y+R TE RRLCD LR H+ NLQK+    ++A+  S++RGWEGW +DSIELHLQTRFAQLE A+ L+L+TEGFRTVEDIYNI+Q+S
Sbjct:   39 RRHRTWSPVYEQIMIAYLNLCLKLHRAREAKDGLHQYRNLAQSQAPGSLEKVIRYLLEKAEDQCNRAKAAADAAAASESSTPLSVLEDADAEDAEGESGIGPQAILLSSMTTDPAKSQRDSLLLVPSLKFLWEIYRAILDILRSNSKLEHVYHATSVSAFQFCR---AYQRRTEFRRLCDLLRMHLGNLQKYGDDSASAKPNSKVRGWEGWTSDSIELHLQTRFAQLESASYLKLYTEGFRTVEDIYNILQIS 288          
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Match: A0A7S4R7B1_9STRA (Eukaryotic translation initiation factor 3 subunit A n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7B1_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.780e-80
Identity = 138/254 (54.33%), Postives = 183/254 (72.05%), Query Frame = 0
Query:    1 RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLEVIINYLVDQAEKRATNSRKKAD-----EMSLVEAAKVGDLEAEATPESIMLSTMTEEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFNFCRQVLTYERTTELRRLCDTLRQHISNLQKHSAA---------QTTSRLRGWEGWNNDSIELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVSIS 240
            RR+KTW   YE IM+ Y++LC+ L + R+AKDGLHQYRN++Q QAPGSLE +I YL+D AEK+   ++ +AD       + VE  ++ DL+  +TP+SI+LSTM+ + EK + D  +++P LKFLWETYRAVLDIL++NSKLE +YH   + A  FCR+   Y R TE RRLCD LR H+ NLQK+ +          +  +++RGWEGW  +SIELHLQTRFAQLE A+ L L+TEGFRTVEDIYNI+Q+S S
Sbjct:   41 RRHKTWSPTYEQIMITYLNLCLSLNKSREAKDGLHQYRNLSQSQAPGSLENVIRYLIDAAEKKCKTAKAEADARGAASATAVEEDEIDDLDNASTPQSILLSTMSVDPEKTQRDSALLLPSLKFLWETYRAVLDILRSNSKLERLYHGAALGALKFCRE---YRRRTEFRRLCDMLRMHLGNLQKYGSGVVPGVEEGGKPNNKVRGWEGWTTESIELHLQTRFAQLETASVLHLYTEGFRTVEDIYNILQISHS 291          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51140.12373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL6_ECTSI3.350e-14795.36Eukaryotic translation initiation factor 3 subunit... [more]
A0A836CG33_9STRA7.960e-12178.06Eukaryotic translation initiation factor 3 subunit... [more]
A0A6V1NAU3_HETAK2.230e-10566.11Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0XXZ4_AURAN5.280e-10165.27PCI domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A7S3ZQV0_9STRA1.500e-8961.76Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KUY2_9PHAE4.200e-8692.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2R6Z3_9STRA4.670e-8658.09Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3K207_9STRA2.190e-8557.68Hypothetical protein n=3 Tax=Aureoumbra lagunensis... [more]
A0A448Z9Q6_9STRA1.240e-8155.73Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4R7B1_9STRA1.780e-8054.33Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.860.10coord: 196..243
e-value: 7.0E-17
score: 62.6
IPR027512Eukaryotic translation initiation factor 3 subunit APANTHERPTHR14005EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNITcoord: 1..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51140contigH-elongata_contig51140:125..3218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51140.12373.1mRNA_H-elongata_contig51140.12373.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51140 125..3218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51140.12373.1 ID=prot_H-elongata_contig51140.12373.1|Name=mRNA_H-elongata_contig51140.12373.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
RRYKTWQTAYETIMLKYMDLCVQLQQHRQAKDGLHQYRNMAQQQAPGSLE
VIINYLVDQAEKRATNSRKKADEMSLVEAAKVGDLEAEATPESIMLSTMT
EEGEKERADREMVVPWLKFLWETYRAVLDILKTNSKLEHVYHATCIKAFN
FCRQVLTYERTTELRRLCDTLRQHISNLQKHSAAQTTSRLRGWEGWNNDS
IELHLQTRFAQLEVAAGLELWTEGFRTVEDIYNIMQVSISISLWKKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027512EIF3A