prot_H-elongata_contig50656.12314.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig50656.12314.1
Unique Name	prot_H-elongata_contig50656.12314.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	102

Homology

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: D8LFG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG5_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 7.000e-39
Identity = 67/100 (67.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAA 100
            MSGGEDGTARVMHVQNKRV+GT+                  H     GSVEAVGFCATHPWVAT GTDG +KVWD++SGTCRH C+HP AVTRLEWHPAA
Sbjct:  288 MSGGEDGTARVMHVQNKRVVGTM-----------------VHCDAGAGSVEAVGFCATHPWVATGGTDGGMKVWDTVSGTCRHTCLHPAAVTRLEWHPAA 370

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A8K1FMQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMQ3_PYTOL)

HSP 1 Score: 93.2 bits (230), Expect = 3.390e-20
Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 0

Query:    3 GGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            G +DGTAR+M VQ KRV+G  +  H   E+  G ++   H + +  SVE  GFC T  W AT    GAL++WD  +  CRH C HP  VT+L WHP  P+
Sbjct:  258 GSQDGTARLMQVQTKRVIGIFS--HDVNEALSGTVNSEVHATEN--SVECGGFCNTMNWAATGCLGGALRIWDLSTYQCRHVCQHPAGVTKLLWHPTQPI 353

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: K3WRZ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRZ8_GLOUD)

HSP 1 Score: 92.4 bits (228), Expect = 6.700e-20
Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DG+A+++ +Q KRVL T +  H + E+T G + ++     +  SVE  GFC T  W AT    G +++WD  +  CRH C HP  V +L WHP  P+
Sbjct:  258 ISGSQDGSAKLIQIQAKRVLATFS--HDRNEATAGTVQEQLQDQATENSVECAGFCNTMQWAATGCLGGFVRIWDLSTYQCRHVCQHPAGVIKLMWHPTLPI 357

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: H3GXG4_PHYRM (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=H3GXG4_PHYRM)

HSP 1 Score: 91.7 bits (226), Expect = 1.200e-19
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIE-STCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTAR++ VQ KRVL TL+  H  I+ S  G ++     + +  SVE  GFC T  W AT    G L++WD  +  CRHAC HP  V +L WHP  PV
Sbjct:  251 LSGSQDGTARLIQVQTKRVLATLS--HDNIDPSVAGTVNDT--ATATENSVECGGFCNTMNWAATGCLGGYLRIWDLATNQCRHACRHPAGVIKLLWHPTQPV 349

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A2D4BFN1_PYTIN (Angio-associated migratory cell protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFN1_PYTIN)

HSP 1 Score: 90.9 bits (224), Expect = 2.330e-19
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query:    3 GGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            G +DG+AR++ VQ KRVL  L+  H   E+  G I+    T  +  SVE  GFC+T  W ATA   G+L++WD  +  CRH C HP  VT+L WHP  P+
Sbjct:  257 GSQDGSARLVQVQAKRVLAVLS--HDISEARVGTINSE--TEATANSVECGGFCSTMNWAATACLGGSLRIWDLSTYQCRHVCSHPAGVTKLLWHPTQPI 352

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A3M6VL09_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL09_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.880e-19
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIE-STCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTAR+M VQ KR+L   +  H  I+ S  G ++   ++S +  SVE  GFC T  W AT    G L++WD  +  CRH C HP  V +L WHPA P+
Sbjct:  299 ISGSQDGTARLMQVQTKRILAAFS--HEGIDPSVAGTVND--NSSATENSVECGGFCNTMNWAATGCLGGYLRIWDLATNQCRHVCRHPAGVIKLLWHPAQPI 397

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A5D6XV78_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV78_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.250e-18
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTS-RGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTA+++ +Q KRVL T +  H + E+T G + +   T  S   SVE  GF  T  W AT    G++++WD  +  CRH C HP  V +L WHP  P+
Sbjct:  264 ISGSQDGTAKLLQIQTKRVLATFS--HDRNEATAGTVYEEQKTDNSTENSVECAGFSNTMQWAATGCLGGSVRIWDLSNYHCRHICRHPAGVIKLIWHPTVPI 364

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A421F6J9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F6J9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.370e-18
Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTAR++ VQ KRVL TL+  H       G +++    +T+  SVE  GFC T  W AT    G L++WD  +  CRH C HP  V +L WHP  P+
Sbjct:  229 ISGSQDGTARLLQVQTKRVLATLS--HDADPILAGTVNET--ATTTENSVECGGFCNTMNWAATGCLGGFLRIWDLATYQCRHICRHPAGVIKLLWHPTQPI 326

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A835YY67_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY67_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.600e-18
Identity = 52/129 (40.31%), Postives = 58/129 (44.96%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGT------LNAAHRKIESTCGVIDKRPHTSTSRG----SVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAV------------------TRLEWHPAAP 101
            +SG EDGTAR++H Q KRVL T      + AA                          SVEAVGFCA  PW AT G DG LK+WD  SG CRH C HP  +                  TRL WHP  P
Sbjct:  283 LSGSEDGTARLVHAQTKRVLATFVHSANVAAAXXXXXXXXXXXXXXXXXDAMEAEASFSVEAVGFCAVRPWCATGGADGNLKIWDLQSGLCRHTCRHPAGIXXXXXXXXXXXXXXXXXXTRLRWHPRLP 411

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BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A0P1B3B7_PLAHL (Angio-associated migratory cell protein (Contains WD40 repeats) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3B7_PLAHL)

HSP 1 Score: 86.3 bits (212), Expect = 1.100e-17
Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 0

Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIEST-CGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHP 98
            +SG +DGTAR++ VQ KRVL TL+  H  ++ST  G +++   T ++  SVE  GFC T  W AT    G L++WD  +  CRH C HP  V +L WHP
Sbjct:  253 LSGSQDGTARLIQVQTKRVLATLS--HDGVDSTIAGSVNEV--TVSTNNSVECGGFCNTMNWAATGCLGGFLRIWDLTTYHCRHVCRHPAGVIKLLWHP 347

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot

BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22


Match Name	E-value	Identity	Description
D8LFG5_ECTSI	7.000e-39	67.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A8K1FMQ3_PYTOL	3.390e-20	45.00	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WRZ8_GLOUD	6.700e-20	39.22	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
H3GXG4_PHYRM	1.200e-19	45.63	Uncharacterized protein n=25 Tax=Phytophthora TaxI...	[more]
A0A2D4BFN1_PYTIN	2.330e-19	45.00	Angio-associated migratory cell protein n=1 Tax=Py...	[more]
A0A3M6VL09_9STRA	2.880e-19	43.69	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]
A0A5D6XV78_9STRA	1.250e-18	40.78	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A421F6J9_9STRA	1.370e-18	43.14	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
A0A835YY67_9STRA	1.600e-18	40.31	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
A0A0P1B3B7_PLAHL	1.100e-17	45.45	Angio-associated migratory cell protein (Contains ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..102 e-value: 4.4E-17 score: 63.9
None	No IPR available	PANTHER	PTHR19857	FAMILY NOT NAMED	coord: 1..99
None	No IPR available	PANTHER	PTHR19857:SF8	MITOCHONDRIAL DIVISION PROTEIN 1-RELATED	coord: 1..99
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 62..76
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 43..84 score: 9.439
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 43..84 score: 9.309
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig50656	contig	H-elongata_contig50656:409..1141 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig50656.12314.1	mRNA_H-elongata_contig50656.12314.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig50656 400..1141 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig50656.12314.1 ID=prot_H-elongata_contig50656.12314.1|Name=mRNA_H-elongata_contig50656.12314.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSV
EAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAA
PV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR019775	WD40_repeat_CS
IPR001680	WD40_repeat
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf