prot_H-elongata_contig50656.12314.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50656.12314.1
Unique Nameprot_H-elongata_contig50656.12314.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: D8LFG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG5_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 7.000e-39
Identity = 67/100 (67.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAA 100
            MSGGEDGTARVMHVQNKRV+GT+                  H     GSVEAVGFCATHPWVAT GTDG +KVWD++SGTCRH C+HP AVTRLEWHPAA
Sbjct:  288 MSGGEDGTARVMHVQNKRVVGTM-----------------VHCDAGAGSVEAVGFCATHPWVATGGTDGGMKVWDTVSGTCRHTCLHPAAVTRLEWHPAA 370          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A8K1FMQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMQ3_PYTOL)

HSP 1 Score: 93.2 bits (230), Expect = 3.390e-20
Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    3 GGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            G +DGTAR+M VQ KRV+G  +  H   E+  G ++   H + +  SVE  GFC T  W AT    GAL++WD  +  CRH C HP  VT+L WHP  P+
Sbjct:  258 GSQDGTARLMQVQTKRVIGIFS--HDVNEALSGTVNSEVHATEN--SVECGGFCNTMNWAATGCLGGALRIWDLSTYQCRHVCQHPAGVTKLLWHPTQPI 353          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: K3WRZ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRZ8_GLOUD)

HSP 1 Score: 92.4 bits (228), Expect = 6.700e-20
Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DG+A+++ +Q KRVL T +  H + E+T G + ++     +  SVE  GFC T  W AT    G +++WD  +  CRH C HP  V +L WHP  P+
Sbjct:  258 ISGSQDGSAKLIQIQAKRVLATFS--HDRNEATAGTVQEQLQDQATENSVECAGFCNTMQWAATGCLGGFVRIWDLSTYQCRHVCQHPAGVIKLMWHPTLPI 357          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: H3GXG4_PHYRM (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=H3GXG4_PHYRM)

HSP 1 Score: 91.7 bits (226), Expect = 1.200e-19
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIE-STCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTAR++ VQ KRVL TL+  H  I+ S  G ++     + +  SVE  GFC T  W AT    G L++WD  +  CRHAC HP  V +L WHP  PV
Sbjct:  251 LSGSQDGTARLIQVQTKRVLATLS--HDNIDPSVAGTVNDT--ATATENSVECGGFCNTMNWAATGCLGGYLRIWDLATNQCRHACRHPAGVIKLLWHPTQPV 349          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A2D4BFN1_PYTIN (Angio-associated migratory cell protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFN1_PYTIN)

HSP 1 Score: 90.9 bits (224), Expect = 2.330e-19
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    3 GGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            G +DG+AR++ VQ KRVL  L+  H   E+  G I+    T  +  SVE  GFC+T  W ATA   G+L++WD  +  CRH C HP  VT+L WHP  P+
Sbjct:  257 GSQDGSARLVQVQAKRVLAVLS--HDISEARVGTINSE--TEATANSVECGGFCSTMNWAATACLGGSLRIWDLSTYQCRHVCSHPAGVTKLLWHPTQPI 352          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A3M6VL09_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL09_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.880e-19
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIE-STCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTAR+M VQ KR+L   +  H  I+ S  G ++   ++S +  SVE  GFC T  W AT    G L++WD  +  CRH C HP  V +L WHPA P+
Sbjct:  299 ISGSQDGTARLMQVQTKRILAAFS--HEGIDPSVAGTVND--NSSATENSVECGGFCNTMNWAATGCLGGYLRIWDLATNQCRHVCRHPAGVIKLLWHPAQPI 397          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A5D6XV78_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV78_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.250e-18
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTS-RGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTA+++ +Q KRVL T +  H + E+T G + +   T  S   SVE  GF  T  W AT    G++++WD  +  CRH C HP  V +L WHP  P+
Sbjct:  264 ISGSQDGTAKLLQIQTKRVLATFS--HDRNEATAGTVYEEQKTDNSTENSVECAGFSNTMQWAATGCLGGSVRIWDLSNYHCRHICRHPAGVIKLIWHPTVPI 364          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A421F6J9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F6J9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.370e-18
Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAAPV 102
            +SG +DGTAR++ VQ KRVL TL+  H       G +++    +T+  SVE  GFC T  W AT    G L++WD  +  CRH C HP  V +L WHP  P+
Sbjct:  229 ISGSQDGTARLLQVQTKRVLATLS--HDADPILAGTVNET--ATTTENSVECGGFCNTMNWAATGCLGGFLRIWDLATYQCRHICRHPAGVIKLLWHPTQPI 326          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A835YY67_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY67_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.600e-18
Identity = 52/129 (40.31%), Postives = 58/129 (44.96%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGT------LNAAHRKIESTCGVIDKRPHTSTSRG----SVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAV------------------TRLEWHPAAP 101
            +SG EDGTAR++H Q KRVL T      + AA                          SVEAVGFCA  PW AT G DG LK+WD  SG CRH C HP  +                  TRL WHP  P
Sbjct:  283 LSGSEDGTARLVHAQTKRVLATFVHSANVAAAXXXXXXXXXXXXXXXXXDAMEAEASFSVEAVGFCAVRPWCATGGADGNLKIWDLQSGLCRHTCRHPAGIXXXXXXXXXXXXXXXXXXTRLRWHPRLP 411          
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Match: A0A0P1B3B7_PLAHL (Angio-associated migratory cell protein (Contains WD40 repeats) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3B7_PLAHL)

HSP 1 Score: 86.3 bits (212), Expect = 1.100e-17
Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 0
Query:    1 MSGGEDGTARVMHVQNKRVLGTLNAAHRKIEST-CGVIDKRPHTSTSRGSVEAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHP 98
            +SG +DGTAR++ VQ KRVL TL+  H  ++ST  G +++   T ++  SVE  GFC T  W AT    G L++WD  +  CRH C HP  V +L WHP
Sbjct:  253 LSGSQDGTARLIQVQTKRVLATLS--HDGVDSTIAGSVNEV--TVSTNNSVECGGFCNTMNWAATGCLGGFLRIWDLTTYHCRHVCRHPAGVIKLLWHP 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50656.12314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LFG5_ECTSI7.000e-3967.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1FMQ3_PYTOL3.390e-2045.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WRZ8_GLOUD6.700e-2039.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GXG4_PHYRM1.200e-1945.63Uncharacterized protein n=25 Tax=Phytophthora TaxI... [more]
A0A2D4BFN1_PYTIN2.330e-1945.00Angio-associated migratory cell protein n=1 Tax=Py... [more]
A0A3M6VL09_9STRA2.880e-1943.69Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A5D6XV78_9STRA1.250e-1840.78Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A421F6J9_9STRA1.370e-1843.14Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A835YY67_9STRA1.600e-1840.31WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A0P1B3B7_PLAHL1.100e-1745.45Angio-associated migratory cell protein (Contains ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..102
e-value: 4.4E-17
score: 63.9
NoneNo IPR availablePANTHERPTHR19857FAMILY NOT NAMEDcoord: 1..99
NoneNo IPR availablePANTHERPTHR19857:SF8MITOCHONDRIAL DIVISION PROTEIN 1-RELATEDcoord: 1..99
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 62..76
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 43..84
score: 9.439
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 43..84
score: 9.309
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50656contigH-elongata_contig50656:409..1141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50656.12314.1mRNA_H-elongata_contig50656.12314.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50656 400..1141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50656.12314.1 ID=prot_H-elongata_contig50656.12314.1|Name=mRNA_H-elongata_contig50656.12314.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MSGGEDGTARVMHVQNKRVLGTLNAAHRKIESTCGVIDKRPHTSTSRGSV
EAVGFCATHPWVATAGTDGALKVWDSISGTCRHACVHPGAVTRLEWHPAA
PV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf