prot_H-elongata_contig50639.12312.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50639.12312.1
Unique Nameprot_H-elongata_contig50639.12312.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length147
Homology
BLAST of mRNA_H-elongata_contig50639.12312.1 vs. uniprot
Match: D7FNL1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL1_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 2.900e-46
Identity = 89/135 (65.93%), Postives = 107/135 (79.26%), Query Frame = 0
Query:   15 SRVQAMKKTYGEKSAKAAQAFKALDASLAEFFDAMSSRSGRRLTSQLVVGSALTERLAVGGRRLADENSTSA---NENTTLVDITQFQLNLWTGVGLALIAFLAVYATINMDVQPDSLLYAKFIADTSGGGLKTD 146
            S ++A+  +YG +S KA  A KALDA+L E F+AMS+ +GRRLTSQL+VG AL+++LAVGGRRL  +           TTLV+ITQFQLN+WTGVGLAL+ FLA+YAT NMDVQPDSLLYAKFI DTSGGGLKTD
Sbjct:  269 SSLKAINTSYGARSIKARLASKALDAALGEAFNAMSAGAGRRLTSQLIVGPALSQKLAVGGRRLQSDXXXXXXXXTNETTLVEITQFQLNMWTGVGLALMGFLAIYATFNMDVQPDSLLYAKFITDTSGGGLKTD 403          
BLAST of mRNA_H-elongata_contig50639.12312.1 vs. uniprot
Match: A0A836C772_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C772_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.010e-12
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   85 SANENTTLVDITQFQLNLWTGVGLALIAFLAVYATINMDVQPDSLLYAKFIADTS 139
            +A  N TLVDITQ+QLNLWTGV  AL+   A+Y   +MD+  DSLLYAKF ADTS
Sbjct:  268 NATANVTLVDITQYQLNLWTGVFFALLVVAAIYGVASMDIGRDSLLYAKFQADTS 322          
BLAST of mRNA_H-elongata_contig50639.12312.1 vs. uniprot
Match: A0A7S2R5A0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5A0_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.750e-9
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0
Query:   54 GRRLTSQLVVGSALTERLAVGGRRLADENSTSANENTTLVDITQFQLNLWTGVGLALIAFLAVYATINMDVQPDSLLYAKFIADTS 139
            G+ L  QL++G +         RRL D+      +  TL +I  FQ+NLWT V L L+   A+   +NMD+QPDSLLYAKF AD S
Sbjct:  275 GKSLGVQLLIGDSR--------RRLEDDP-----DYYTLPEIVTFQINLWTAVALVLVLLSALCCMVNMDIQPDSLLYAKFQADVS 347          
BLAST of mRNA_H-elongata_contig50639.12312.1 vs. uniprot
Match: A0A7S2D6B3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6B3_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.090e-9
Identity = 43/128 (33.59%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   24 YGEKSAKAAQAFKALDASLAEFFDAMSSRSGRRLTSQLVVGSALTERLAVGGRRLADE-----NSTSA-------NENTTLVDITQFQLNLWTGVGLALIAFLAVYATINMDVQPDSLLYAKFIADTS 139
            +G+ S KA  A   +DA+  E    +S+R   ++ + +++ +      +V  R L DE     ++T+A       N + ++  I ++ L LWTG+ + LI   A+   +NMD+QPDSLLYAKF AD S
Sbjct:  270 HGDDSPKANAAMSLVDAAAREVLAGISARYDDQVAAAVLMDN------SVAARPLHDEFHRFLSATNAPTMTPGYNSSVSIEQIVEYNLGLWTGIVMVLILLSAICCMVNMDIQPDSLLYAKFQADVS 391          
BLAST of mRNA_H-elongata_contig50639.12312.1 vs. uniprot
Match: A0A7S3JQS7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQS7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.380e-8
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   82 NSTSANENTT----LVDITQFQLNLWTGVGLALIAFLAVYATINMDVQPDSLLYAKFIADTSGGGL 143
            N    +++TT    + DI QFQLN+WTG+ L L+   A+ A +NM  + DSLLYA F A+ SGGGL
Sbjct:  271 NKRKLDDSTTTYYPISDIRQFQLNMWTGIALVLVLAAALAAMVNMKPEYDSLLYATFQANVSGGGL 336          
BLAST of mRNA_H-elongata_contig50639.12312.1 vs. uniprot
Match: A0A482SCQ2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCQ2_9ARCH)

HSP 1 Score: 49.3 bits (116), Expect = 4.900e-5
Identity = 20/48 (41.67%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   94 DITQFQLNLWTGVGLALIAFLAVYATINMDVQPDSLLYAKFIADTSGG 141
            +I+Q+Q+ LW G+ + L+   ++   +NMD++PDSLLYAKF +  + G
Sbjct:   39 EISQYQICLWVGLIMVLLVVFSICGIVNMDIEPDSLLYAKFQSTRTEG 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50639.12312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FNL1_ECTSI2.900e-4665.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C772_9STRA6.010e-1263.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5A0_9STRA3.750e-944.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D6B3_9STRA4.090e-933.59Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3JQS7_9STRA2.380e-848.48Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A482SCQ2_9ARCH4.900e-541.67Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..99
NoneNo IPR availableTMHMMTMhelixcoord: 100..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50639contigH-elongata_contig50639:2476..3531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50639.12312.1mRNA_H-elongata_contig50639.12312.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50639 1772..3664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50639.12312.1 ID=prot_H-elongata_contig50639.12312.1|Name=mRNA_H-elongata_contig50639.12312.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
MHHRKHALLYELLYSRVQAMKKTYGEKSAKAAQAFKALDASLAEFFDAMS
SRSGRRLTSQLVVGSALTERLAVGGRRLADENSTSANENTTLVDITQFQL
NLWTGVGLALIAFLAVYATINMDVQPDSLLYAKFIADTSGGGLKTD*
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