prot_H-elongata_contig50593.12310.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50593.12310.1
Unique Nameprot_H-elongata_contig50593.12310.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
BLAST of mRNA_H-elongata_contig50593.12310.1 vs. uniprot
Match: D7FVP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP9_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.340e-64
Identity = 97/118 (82.20%), Postives = 111/118 (94.07%), Query Frame = 0
Query:   75 GSVMKSVGSATGRSVRAVVHALQPKSVGLGEILDTWKIEQVIGKPPGRVTRCAATVEFRRDGTVATSFEGRETVSDFTFRSYSWPRACTIEFRARAFQGPWDEEPVWKIYKVRTKKRL 192
            G VMKSVG ATG+S++A+VHALQPKSVGLGEILDTWKIEQV+GKPPGRVT+CAATVEFRRDGTVATSF+GRETVSDFTFR+++WPRACTIEF A+AFQGPWDEEPVWK+YK    ++L
Sbjct:  248 GGVMKSVGKATGKSMKAMVHALQPKSVGLGEILDTWKIEQVVGKPPGRVTKCAATVEFRRDGTVATSFDGRETVSDFTFRAHAWPRACTIEFEAKAFQGPWDEEPVWKVYKGSFSRKL 365          
BLAST of mRNA_H-elongata_contig50593.12310.1 vs. uniprot
Match: A0A7S2S4V2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4V2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.240e-13
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0
Query:   90 RAVVHALQPKSVGLGEILDTWKIEQVIGKPPGRVTRCAATVEFRRDGTVATSFEGRETVSDFTFRSYSWPRACTIEFRARAFQGPWDEEPVWKIYKVRTKKRL 192
            +A  +   PK V   +I+  W+++Q           CAA VE    G V  +++  E  + + F   SWPR+CTI+F ARAFQGP DE+PV  +Y    ++++
Sbjct:  154 KAAYYLASPKHVSRQDIVGVWRLDQT-----ALSASCAANVELTMRGDVLVTYQAEEFRTPYYFSERSWPRSCTIQFEARAFQGPRDEQPVNMLYVASFRRKI 251          
BLAST of mRNA_H-elongata_contig50593.12310.1 vs. uniprot
Match: A0A7S1D3U6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3U6_CYCTE)

HSP 1 Score: 70.9 bits (172), Expect = 3.810e-12
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0
Query:  126 CAATVEFRRDGTVATSFEGRETVSDFTFRSYSWPRACTIEFRARAFQGPWDEEPVWKIYKVRTKKRL 192
            CAA +E    G V   +E +  VS F FR  +WP++C IEF ARAFQGP DEEPV   YK   +++L
Sbjct:   14 CAANIELTPRGEVLVRYEDKVFVSTFLFRERNWPQSCWIEFEARAFQGPDDEEPVLMRYKGYFRRKL 80          
BLAST of mRNA_H-elongata_contig50593.12310.1 vs. uniprot
Match: A0A7R9ZAC9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAC9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 5.490e-7
Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  143 EGRETVSDFTFRSYSWPRACTIEFRARAFQGPWDEEPVWKIYKVRTKKRL 192
            E +E  + +TFR  +WPR+C +EF ARAFQGP D+EPV   Y+   ++++
Sbjct:   17 ETKEFRTPYTFRERAWPRSCYVEFEARAFQGPDDDEPVVMFYRGYFRRKI 66          
BLAST of mRNA_H-elongata_contig50593.12310.1 vs. uniprot
Match: A0A7S4MEB1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEB1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.920e-7
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  145 RETVSDFTFRSYSWPRACTIEFRARAFQGPWDEEPVWKIYKVRTKKRL 192
            RE  + + FR  SWPR+CT+EF ARAFQGP D+EPV   Y+   ++++
Sbjct:  329 REFRTPYKFRERSWPRSCTVEFEARAFQGPDDDEPVTMYYRGYFRRKI 376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50593.12310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVP9_ECTSI1.340e-6482.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S4V2_9STRA1.240e-1334.95Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1D3U6_CYCTE3.810e-1249.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9ZAC9_9STRA5.490e-746.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4MEB1_9STRA7.920e-750.00Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50593contigH-elongata_contig50593:1211..2928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50593.12310.1mRNA_H-elongata_contig50593.12310.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50593 1211..2928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50593.12310.1 ID=prot_H-elongata_contig50593.12310.1|Name=mRNA_H-elongata_contig50593.12310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
IDDGDDDGDRDNGRCRYGSGNDRSRRGDRNLQRRDRHQGAAQDGGAHLAR
RRADDRRQSSSRRGILPVDRERNGGSVMKSVGSATGRSVRAVVHALQPKS
VGLGEILDTWKIEQVIGKPPGRVTRCAATVEFRRDGTVATSFEGRETVSD
FTFRSYSWPRACTIEFRARAFQGPWDEEPVWKIYKVRTKKRLHTNTYS*
back to top