prot_H-elongata_contig5032.12265.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5032.12265.1
Unique Nameprot_H-elongata_contig5032.12265.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
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BLAST of mRNA_H-elongata_contig5032.12265.1 vs. uniprot
Match: R7U1D0_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7U1D0_CAPTE)

HSP 1 Score: 63.2 bits (152), Expect = 1.160e-9
Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 0 
Query:    1 EEHYRRALTIFEKELDPHHPRVTRLLSDLAGFPFHPSSRFGFERQGQNDDAEELYKQAINIRERVQGPDHLDVAIDLINLAALLKSQ 87
            E H   A+   E+     HPRV   L+D+AG   +P ++ G++R    D AE+LY++A++IRE+  G DHL VA  L +L  LLK +
Sbjct: 1081 ETHLSHAMLSLERWYGKSHPRVADALNDMAGLLCNPRNKSGYDR----DQAEQLYRRALSIREKTFGNDHLLVATTLFHLGKLLKDK 1163
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5032.12265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7U1D0_CAPTE1.160e-940.23Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..87
e-value: 9.6E-20
score: 72.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..86
NoneNo IPR availablePFAMPF13424TPR_12coord: 44..85
e-value: 5.9E-10
score: 39.3
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..87
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 2..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5032contigH-elongata_contig5032:1066..1586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5032.12265.1mRNA_H-elongata_contig5032.12265.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5032 1066..1586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5032.12265.1 ID=prot_H-elongata_contig5032.12265.1|Name=mRNA_H-elongata_contig5032.12265.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
EEHYRRALTIFEKELDPHHPRVTRLLSDLAGFPFHPSSRFGFERQGQNDD
AEELYKQAINIRERVQGPDHLDVAIDLINLAALLKSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf