prot_H-elongata_contig50252.12254.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50252.12254.1
Unique Nameprot_H-elongata_contig50252.12254.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig50252.12254.1 vs. uniprot
Match: A0A6H5JMX7_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX7_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 4.440e-12
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0 
Query:    2 DVGEHILGSKSIA----DIEPTDYSELTETAYEQDGDDTSFSFSRNTTPQTPDEEKLVIPNVVGTPIYVIWAKGMDNTFGYHGNST 83
            +V E  L ++S      D +  D  EL++  + QDGDDT+FSF+RNTTP +    K  +P   G+ I++IWA G DN FGYHG S+
Sbjct:   96 EVSEQFLDAQSEVVLDRDEDDRDTDELSDIEFSQDGDDTTFSFTRNTTPDS--SLKQTLPEEPGSQIHLIWALGNDNAFGYHGQSS 179
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50252.12254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JMX7_9PHAE4.440e-1244.19DOMON domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50252contigH-elongata_contig50252:1614..2587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50252.12254.1mRNA_H-elongata_contig50252.12254.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50252 1614..2587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50252.12254.1 ID=prot_H-elongata_contig50252.12254.1|Name=mRNA_H-elongata_contig50252.12254.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
NDVGEHILGSKSIADIEPTDYSELTETAYEQDGDDTSFSFSRNTTPQTPD
EEKLVIPNVVGTPIYVIWAKGMDNTFGYHGNST
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