prot_H-elongata_contig5021.12248.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5021.12248.1
Unique Nameprot_H-elongata_contig5021.12248.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length219
Homology
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Match: D8LS81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS81_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.470e-49
Identity = 90/147 (61.22%), Postives = 107/147 (72.79%), Query Frame = 0
Query:   81 DDTLPFVRSVDELRRFVRLEGSVVGHGRCMWADTFAHHVVSRRLGLTILFVDMERAKTAWPYRVLARAVKEGGGEVEERFVVLKREPNHFVLIKTLPVVVPDEAIDAQASPK--------------KGQACFRRSELPDVMRRLWQI 213
            ++ LP V +V+ELRRFVRLEGS VGHG CMWADT AHHVVSRRL +TILFVDMER K AWPYRVLAR V +     +ERFVVLKREP+HFVL++T+P   P+++  A  S                +GQACF RSELPDV+RRLWQ+
Sbjct:  342 NEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDGEDERFVVLKREPSHFVLLETVPS--PEDSDGAVGSDSGXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 486          
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Match: A0A6H5L3H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H2_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 7.680e-49
Identity = 91/147 (61.90%), Postives = 109/147 (74.15%), Query Frame = 0
Query:   81 DDTLPFVRSVDELRRFVRLEGSVVGHGRCMWADTFAHHVVSRRLGLTILFVDMERAKTAWPYRVLARAVKEGGGEVEERFVVLKREPNHFVLIKTLPVVVPDEAIDAQASPK--------------KGQACFRRSELPDVMRRLWQI 213
            ++ LP V +V+ELRRFVRLEGS VGHG CMWADT AHHVVSRRL +TILFVDMER K AWPYRVLAR V +   E +ERFVVLKREP+HFVL++T+P   P+++  A +S                +GQACF RSELPDV+RRLWQ+
Sbjct:  662 NEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAWPYRVLARTVTDSDDEEDERFVVLKREPSHFVLLETVPS--PEDSDGAVSSXXXXXXXXXXXXXKGGRGQACFSRSELPDVVRRLWQL 806          
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Match: A0A836CA53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA53_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.770e-19
Identity = 57/134 (42.54%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   80 GDDTLPFVRSVDELRRFVRLEGSVVGHGRCMWADTFAHHVVSRRLGLTILFVDMERAKTAWPYRVLARAVKEGGGEVEERFVVLKRE--PNHFVLIKTLPVVVPDEAIDAQASPKKGQACFRRSELPDVMRRLW 211
            G+   P V++V++L+ ++R EGS  G G CMWAD  A  VV++RL L ILFVDMERA+ AWPYR LA    E        +VVLKRE    HFV I                    G A F   +LP+ +R LW
Sbjct:  202 GEARGPAVQTVEQLQEYIRREGSACGAGDCMWADDAAFAVVAQRLRLGILFVDMERARCAWPYRQLAACEGEPA-----HYVVLKREGPAGHFVYI----------------GAASGAAAFALRDLPNAVRALW 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5021.12248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS81_ECTSI1.470e-4961.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3H2_9PHAE7.680e-4961.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CA53_9STRA1.770e-1942.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5021contigH-elongata_contig5021:5226..6191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5021.12248.1mRNA_H-elongata_contig5021.12248.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5021 5142..7191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5021.12248.1 ID=prot_H-elongata_contig5021.12248.1|Name=mRNA_H-elongata_contig5021.12248.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
MVTSVREAGRLGRRKRGGRGPAAIETTTNAANVAKLPTRKSSRVGTHAQV
SSRIEEGVKEGGLEEEEDQDEKDDNDEDSGDDTLPFVRSVDELRRFVRLE
GSVVGHGRCMWADTFAHHVVSRRLGLTILFVDMERAKTAWPYRVLARAVK
EGGGEVEERFVVLKREPNHFVLIKTLPVVVPDEAIDAQASPKKGQACFRR
SELPDVMRRLWQIEPISR*
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