prot_H-elongata_contig50148.12242.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50148.12242.1
Unique Nameprot_H-elongata_contig50148.12242.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
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BLAST of mRNA_H-elongata_contig50148.12242.1 vs. uniprot
Match: D8LFW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-10
Identity = 35/60 (58.33%), Postives = 38/60 (63.33%), Query Frame = 0 
Query:    1 FRAPFCFPAHPGELRLLLRGRLPEYLRRVEEGSGGAEFGGSWLDNAGVLPPMLEGIADEV 60
            F  PF  P H  ELRLLLRGRLPEYL  VE   GG    G WL NA VLP  LE +A+E+
Sbjct:  496 FGPPFV-PTHREELRLLLRGRLPEYLGHVERWLGGEGKFGDWLGNAHVLPVALESLAEEI 554
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50148.12242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFW8_ECTSI1.080e-1058.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50148contigH-elongata_contig50148:279..458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50148.12242.1mRNA_H-elongata_contig50148.12242.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50148 279..458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50148.12242.1 ID=prot_H-elongata_contig50148.12242.1|Name=mRNA_H-elongata_contig50148.12242.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
FRAPFCFPAHPGELRLLLRGRLPEYLRRVEEGSGGAEFGGSWLDNAGVLP
PMLEGIADEV
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