prot_H-elongata_contig5002.12224.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A699RE47_TANCI (Putative RNA-directed DNA polymerase (Fragment) n=2 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699RE47_TANCI) HSP 1 Score: 69.7 bits (169), Expect = 1.260e-13 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0
Query: 3 IPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
+PKG + V RW K N G+V + K +VA+GC+Q+YGV+Y + FA + ++V++V+ VA+ NGW L
Sbjct: 19 LPKGKHAVGSRWVFKTKFNSDGSVDRYKACLVAQGCTQQYGVDYKETFAPVAKMTTVRVVLSVAINNGWPL 89
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A4Y1RRK6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RRK6_PRUDU) HSP 1 Score: 67.0 bits (162), Expect = 6.550e-13 Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 2 DIPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
D+PKG V +W K NE G V K K +VA+G +QE+G++Y +VFA + +++LVV +A +N W++
Sbjct: 18 DLPKGEKTVGVKWIYKTKLNEKGEVDKYKARLVAKGYTQEHGIDYAEVFAPVARLDTIRLVVSLAAQNSWQI 89
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A438HG45_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HG45_VITVI) HSP 1 Score: 67.4 bits (163), Expect = 2.210e-11 Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 2 DIPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGW 71
D+P G + +W K NE+G V K K +VA+GCSQ+YGV+Y++VFA + ++++V+ +A + W
Sbjct: 854 DLPSGGKTIGVKWIFKTKLNENGEVDKYKARLVAKGCSQQYGVDYVEVFAPVARLETIRIVISLAAQKDW 923
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A6D2LPC9_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2LPC9_9BRAS) HSP 1 Score: 65.1 bits (157), Expect = 3.440e-11 Identity = 29/70 (41.43%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 4 PKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
P+ NI+S +W KTN +G+ +K K +VARG SQEYGV+YL+ FA S ++++++ +A + W L
Sbjct: 20 PEKKNIISVKWIYRIKTNANGDPIKHKARLVARGFSQEYGVDYLETFAPVSRHDTIRVILALAAQKKWRL 89
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A0L9TUK8_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9TUK8_PHAAN) HSP 1 Score: 66.6 bits (161), Expect = 4.120e-11 Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 2 DIPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
D P G + +W K NEHGN+ K K +VA+G SQ+YGV+Y +VFA + +V++++ +A ++ WE+
Sbjct: 869 DAPTGITPIGVKWVFKTKLNEHGNIEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTVRVLLAIAAQHKWEV 940
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: Q9LH44_ARATH (Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9LH44_ARATH) HSP 1 Score: 66.6 bits (161), Expect = 4.130e-11 Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 4 PKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
PK N++S +W KT+ G +K K +VARG +QEYGV+YL+ FA S +++ ++ +A + GW+L
Sbjct: 876 PKDKNVISVKWIFRLKTDASGEAIKRKARLVARGFTQEYGVDYLETFAPVSRYDTIRTIMAIAAQQGWKL 945
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A2K3MGT9_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MGT9_TRIPR) HSP 1 Score: 66.2 bits (160), Expect = 5.300e-11 Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 2 DIPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
D+P GA + +W K NE+G V K K +VA+G SQ+YGV+Y +VFA + ++++V+ +A + GW +
Sbjct: 293 DLPTGAKTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWNV 364
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A151QP20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QP20_CAJCA) HSP 1 Score: 66.2 bits (160), Expect = 5.390e-11 Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 2 DIPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
D PKG + +W K NE GNV K K +VA+G SQ+YGV+Y +VFA + +V++++ +A ++ WE+
Sbjct: 18 DAPKGVTPIGVKWVYKTKLNERGNVEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTVRVLLALAAQHRWEV 89
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A2K3M4Z2_TRIPR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M4Z2_TRIPR) HSP 1 Score: 66.2 bits (160), Expect = 5.440e-11 Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 2 DIPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
D+P GA + +W K NE+G V K K +VA+G SQ+YGV+Y +VFA + ++++V+ +A + GW +
Sbjct: 41 DLPTGAKTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWSV 112
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Match: A0A2K3LTN2_TRIPR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LTN2_TRIPR) HSP 1 Score: 66.2 bits (160), Expect = 5.500e-11 Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 0
Query: 2 DIPKGANIVSGRWGRSWKTNEHGNVLKPKPLMVARGCSQEYGVEYLKVFAQKSLTSSVKLVVGVAVENGWEL 73
D+P GA + +W K NE+G V K K +VA+G SQ+YGV+Y +VFA + ++++V+ +A + GW +
Sbjct: 109 DLPTGAKTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWNV 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5002.12224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig5002.12224.1 ID=prot_H-elongata_contig5002.12224.1|Name=mRNA_H-elongata_contig5002.12224.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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