prot_H-elongata_contig499.12211.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig499.12211.1
Unique Nameprot_H-elongata_contig499.12211.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length585
Homology
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A6H5KA31_9PHAE (RNA_pol_sigma70 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA31_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 2.190e-101
Identity = 189/358 (52.79%), Postives = 249/358 (69.55%), Query Frame = 0
Query:  160 VNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAANGHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGDSP--EGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDH-AGQLAGVEVLPQPAQEAVVAAATMIAVKESTNNARSRRGGSG 514
            +N Y   LK+ +LL   EE+V+GR++QRG++ E  RDRLE   G+AP+ +EWA+ L L   ELL +L  A  AK  MISANLRLVVS+A+ YR +G+AFPDLIQEGT+GLVKA EKFNPE+GF+F TYA WWIK+SI+ GI  QSRVIRLP  V +FL S+++ + ++  +G +PTD E+G+ L  + +KIQ YR+AA  T S+SLD R     +V +    +L   + E  +P  E  +    ++ KV  LL TL  REQKVVRARYGLDG + +TL+EIGR+  +TRERVRQIESKA++KLRQPYRNYR+R+H  GQ+     L +PA EAV AA  +IA  E    A+ R+  SG
Sbjct:  240 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVDGRVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASN--KVSDGAADDLGTQIGEKSTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAEGLE-AKQRQPASG 594          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.330e-97
Identity = 168/319 (52.66%), Postives = 230/319 (72.10%), Query Frame = 0
Query:  155 GKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMA-ANGHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGD-SPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRD 471
            G G A+ FY+  + +  LL   EE+V+GR++Q+GV  E  RD L+  RG  P+ +EWA ALG+   EL+ +L  A +AK AM++ANLRLVVS+AKRYR++ ++F DLIQEGT GLVKA+EKF+PE GFKFSTYATWWIKQSI+ GI +QSR+IRLPVHV  FL+ V++++++M   NG LPTD+E+ E L+ SA +IQ+YR AA  T S+     I            E+   V   + +P+  + +  +++KV  LL TL  REQ+VV+AR+GL G  PRTL+E+GR+F +TRERVRQIE++A++KLRQPYRNYR+RD
Sbjct:   46 GGGDALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPSEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDDELAEHLEVSAVRIQYYRDAAQATLSMEAPRNIASKTSTSPGKKVEMGQGVSGPEKTPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRD 364          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 6.820e-97
Identity = 207/496 (41.73%), Postives = 293/496 (59.07%), Query Frame = 0
Query:   15 MCSRTSPSVGFTSPGYSGTRMQGAGDSFYSSERRLASPT----DHASG-----ICGRLSYSLCASRTSIVT-------------LEKHTPSRPQSRRRARMSVKA------------PETVIGLKQARRTR---HCRGHAQRSGEPRARRSEGQLNGDGSLAEATLAADGARARLPRGKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMA-ANGHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGD-SPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRD 471
            MC+   P+ GFT P     R+ GAGD+FYS+ERRLA+ +    D  SG     + GR + +   +R ++               ++   PSR  + R    +V A            P  + G+    R     +     ++   P   R +  + G G ++    A              A+ FY+  + +  LL   EE+V+GR++Q+GV  E  RD L+  RG  PT +EWA ALG+   EL+ +L  A +AK AM++ANLRLVVS+AKRYR++ ++F DLIQEGT GLVKA+EKF+PE GFKFSTYATWWIKQSI+ GI +QSR+IRLPVHV  FL+ V++++++M   NG LPTD E+ E L+ SA +IQ+YR AA  T S+     I            E+   V   + +P+  + +  +++KV  LL TL  REQ+VV+AR+GL G  PRTL+E+GR+F +TRERVRQIE++A++KLRQPYRNYR+RD
Sbjct:    1 MCASAPPAEGFTPP-VCLARVCGAGDAFYSAERRLAAGSGAGRDGGSGGRRGTMRGREAAAAPVARGALPAPPTRRRSTAARWMIQHPAPSRSAATRMMSAAVAAEPVEELDTLRPPPPQLPGMPFDMRDDSEFYLEMERKKEAGPTYTR-DSDMVGLGKVSTKKSAKRDGXXXXXXXXXDALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPTEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDEELAEHLEVSAVRIQYYRDAAQATLSMEAPRTIASKTSTSPGKKVEMGQGVSGPEKTPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRD 494          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.320e-81
Identity = 157/339 (46.31%), Postives = 226/339 (66.67%), Query Frame = 0
Query:  140 EATLAADGARARLPRGKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSL--SLDARIRGNLR-VGENPNAELSDVVVEGDS-PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHA 473
            +A+ + +G  A  P G  GA+++Y++ +    LL   EE+ +GR +Q G+  E A++ L  +    P+  EWAA +G+    L   +  + RAK  MISANLRL VSIAKRY+++G+A  DL+QEG+ GL+KA+E+F+P+ GFKFSTYATWWIKQSI+  I +QSR IRLPVHV   L+S++R++ +++   G  PTD E+   LQ   QKI+FYR+AA +  S+  SL+   +G+   +G   +  L D + + +  PE  +  S L+  +  LL TL  REQ+VVR R+GLD    RTL+EIG+ F +TRERVRQIES+A+ KLRQPYRN++LR +A
Sbjct:   39 DASASMNGGSAVSPVGA-GALSWYLSRMSAIDLLKPEEEVTLGRHIQLGLEWEAAKEELAVRLERQPSRAEWAAHMGVDEDTLKLIMIRSSRAKTTMISANLRLAVSIAKRYKHRGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLELGRTPTDEELSLRLQVPTQKIEFYREAARSVLSMEQSLNNARKGSAASLGGKSDMTLEDSLRDPEPLPEDRTQQSMLKENMSQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAYA 376          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA)

HSP 1 Score: 264 bits (675), Expect = 6.580e-80
Identity = 155/332 (46.69%), Postives = 210/332 (63.25%), Query Frame = 0
Query:  152 LPRGKGGA---VNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGDS------PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHA 473
            +P G  G    +      +    LL   EE+ + R+++ G+  E AR+ L  +    P+  EWAA +G+    L   +  + RAK  MISANLRL VSIAKRYR +G+A PDLIQEG+ GL+KA+E+F+PE GFKFSTYATWWIKQSI+  I +QSR IRLPVHV  FL+SV+R++ +++   G  PTD E+   LQ +AQKI FYR AA +  S+            G +   + SD+ +E         PE  +  + L+  ++ LL TL  REQ+VVR R+GLD    RTL+EIG+ F +TRERVRQIES+A+ KLRQPYRN++LR +A
Sbjct:    6 MPTGSSGQPSQLQHLFKRMTSIDLLKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAKRYRRRGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLELGRHPTDEELAMRLQVTAQKIVFYRDAAQSVLSMEQSRNFASRKGSGASQGGK-SDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAYA 336          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.680e-77
Identity = 143/322 (44.41%), Postives = 221/322 (68.63%), Query Frame = 0
Query:  160 VNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLR----VGENPNAELSDVVVE-GDSPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQ 475
            + ++  ++ Q+ LL A EE+++ R+VQ  +  E  RD L+ Q G  PT +EWA+++G+   EL   L   + AK+AMIS+NLRLV+SIAKRY+ +G+A  DLIQEG+LGLV+A EKF+PE GFKFSTY+TWWIKQ+I+  I +QSR IRLPVH+   L+++++ + ++  + G  PT+ E+ E +    +K++F ++ +    ++S+DA+ R   +     G+    +L D + + G  P  ++  + L+  +  L+ TL  REQ V+R R+GLD   P+TL+EIG  F +TRERVRQIE++A++KLRQPYRN++LR++AGQ
Sbjct:  160 LGWFFKSIGQHSLLRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQKRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHDLLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRP--AVSMDAQRRAMTKKSSSAGKGGEVQLGDSIKDDGPCPTQVTEANMLKEDIEKLVCTLSPREQDVIRMRFGLDADKPKTLEEIGNVFSVTRERVRQIEARALHKLRQPYRNHKLREYAGQ 479          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S2KJI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJI8_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.090e-73
Identity = 144/327 (44.04%), Postives = 210/327 (64.22%), Query Frame = 0
Query:  159 AVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARI-------RGNLRVGENPNAELSDVVVE-GDSPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQL 476
            +++ Y+  +  + LL   EE+++ R +Q  ++ E  R+ LE++    PT+ EWA A+ L  P L   +R ++RAK A+I +NLRLVVSIAKRY  +G+ F DL QEGTLGL +A+EKF+PE GF+FSTYATWWIKQ I+  I +QSR IRLPVHV   L+ V+R + +++   G  PTD EI E  + + QK+ F RKA   T S+     +        G   +G+N    + D++ + G +P  L+    L+  V  +L TL  REQ V+R R+GLD    +TL+EIGR F +TRER+RQIE++A++KLRQPYRN+ ++ +  +L
Sbjct:   89 SISHYLKTMGNHDLLRREEEVILARHIQILIKWEEVREELESKLIRPPTYAEWAVAVNLDVPGLKRQIRRSQRAKAALIESNLRLVVSIAKRYVNRGMNFQDLCQEGTLGLTRATEKFDPERGFRFSTYATWWIKQGIMRAIADQSREIRLPVHVHDQLNGVRRVTKELSELLGRDPTDEEIAEKAKITVQKLTFLRKAQQGTISIETPMNMGAGKGSSSGGGSMGQNDKT-MGDLLRDSGPAPVDLASNEMLKDDVSRMLCTLSPREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIEARALHKLRQPYRNHSVKCYVEEL 414          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A6V1X7N2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1X7N2_HETAK)

HSP 1 Score: 246 bits (627), Expect = 3.310e-72
Identity = 146/324 (45.06%), Postives = 202/324 (62.35%), Query Frame = 0
Query:  163 YINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLAT-PELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAANGHL--PTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEG-DSPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQLAGVEVL 482
            Y+ +L+   +L A EE+++ R+++RG+  E A   LE   G  PT +EW   +GL +  ++  +L+ A ++K A+I+ANLRLVVS AK Y+Y+GV+F DL+QEGT GL KA+EKF+P  GF+FSTYATWWIKQ I+  + +QSRV+RLPVHV   L  ++R+        HL  PT  E+ E    + QKI FY        S+     I       E     +SD+  +  + PE  +    LR+ +  L+ TL  REQ VVR RYGLD    RTL+EIG  F +TRERVRQIE++A++KLRQPYRN+RL+   GQL  V+ L
Sbjct:   65 YVKDLRTVDMLTAQEEILLTRQIKRGMEIEKALVTLEKTLGRKPTEEEWVNFVGLKSIDDIRKNLKRASKSKSAIINANLRLVVSTAKAYQYRGVSFQDLVQEGTCGLHKATEKFDPRKGFRFSTYATWWIKQGIMRAVTDQSRVVRLPVHVHDALFHIRRAKANFWTE-HLREPTLAELAEATGLTPQKIVFYDTVKDKVSSIDKTVGIGTKTNSMEKSQIAISDMCKDSRNKPEETAQVESLRQDISRLINTLSPREQDVVRMRYGLDDGEIRTLEEIGSIFSVTRERVRQIEARALHKLRQPYRNHRLK---GQLDSVDAL 384          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA)

HSP 1 Score: 248 bits (633), Expect = 8.090e-72
Identity = 141/321 (43.93%), Postives = 207/321 (64.49%), Query Frame = 0
Query:  163 YINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRY--RYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRG---NLRVGENPNAELSDVVVEGDS-PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQL 476
            Y+ ++  + LL A EE+++ R VQ  ++ E  R+RLE +    PT+ EWAAA+G+ T +L   +R ++RAK AMI +NLRLV+SIAKRY  R   ++  DL QEG+LGLVKA EKF+PE GF+FSTYATWWIKQS++  I +QSR IRLPVH+   L++V++   ++    G  PT  EI E    +  K+QF  K++  T S   + R+ G              LSD + + +  PE  +  S ++  +  LL TL  REQ V+R R+GLD    +TL+EIG+ F +TRER+RQIE++A++KLRQPYRN++++ +  ++
Sbjct:  177 YLKSMGNHDLLTAQEEVLLARHVQLLLKWEEVRERLEIELARPPTYAEWAAAVGVDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNTLSVQDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQSRTIRLPVHIHDQLNTVRKHKRELTGKLGRQPTTEEIAEAAGITVDKLQFLWKSSRETMSFEQEIRVGGAGXXXXXXXXXTVILSDSITDKEHMPEEKAALSLMKDDIDRLLGTLSVREQDVIRMRFGLDDGKAKTLEEIGKRFRVTRERIRQIEARALHKLRQPYRNHQIKQYVNEM 497          
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S4VUL7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUL7_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.670e-70
Identity = 138/338 (40.83%), Postives = 213/338 (63.02%), Query Frame = 0
Query:  159 AVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAAL--GLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAE----------------LSDVVVEGDS-PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQL 476
            ++  Y+  +  ++LL+  EE+++GRE+Q  V+ E  R+ LEAQ    PT+ EWAA++   ++ PE+   +R + RAK A+  +NLRLV+SIAKRY+ +G++  DL QEGTLGL +A EKF+PE GF+FSTYATWWIKQ+++  I +Q+R IRLPVH+   L+ ++++   +    G  PT  EI E +   A K++F ++AA    S+S++  +R +   G   +                  L D + + D  P  ++ T  L+  V  L+ TL+ REQ V+R R+GLD    +TL+EIGR F +TRER+RQIE++A++KLRQPYRN+ ++ +   L
Sbjct:  164 SIKSYMKVMANHELLNKNEEIILGREIQILVKWEEQRELLEAQLLRPPTYAEWAASIRSDMSVPEMKRQIRRSLRAKAALTESNLRLVISIAKRYQNRGLSMQDLCQEGTLGLTRACEKFDPERGFRFSTYATWWIKQAVMRAIADQARTIRLPVHIHDQLNQIRKAERDLHNELGREPTKEEISEKIGFKADKVEFLKRAAMG--SISMEMELRSSKTKGSGASTXXXXXXXXXXXXERGFTLEDTLKDPDQKPADIAATQMLKDDVSRLICTLNTREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIEARALHKLRQPYRNHSVKSYVKDL 499          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA31_9PHAE2.190e-10152.79RNA_pol_sigma70 domain-containing protein n=2 Tax=... [more]
D8LNI6_ECTSI1.330e-9752.66Chloroplast RNA-polymerase sigma factor n=1 Tax=Ec... [more]
A0A6H5K3H4_9PHAE6.820e-9741.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZES3_9STRA1.320e-8146.31RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A835ZBY3_9STRA6.580e-8046.69RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2WX55_9STRA2.680e-7744.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2KJI8_9STRA1.090e-7344.04Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6V1X7N2_HETAK3.310e-7245.06Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S1B782_9STRA8.090e-7243.93Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4VUL7_9STRA1.670e-7040.83Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 558..578
NoneNo IPR availableGENE3D1.10.601.10coord: 212..308
e-value: 1.5E-39
score: 138.5
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGBcoord: 127..472
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 127..472
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.46
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 434..449
score: 55.93
coord: 260..273
score: 64.15
coord: 284..292
score: 89.82
coord: 449..460
score: 60.75
coord: 413..425
score: 42.78
IPR000943RNA polymerase sigma-70PROSITEPS00716SIGMA70_2coord: 434..460
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 236..296
e-value: 1.0E-15
score: 57.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 391..474
e-value: 1.1E-26
score: 94.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 309..390
e-value: 5.5E-6
score: 28.8
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 232..462
e-value: 2.0E-31
score: 106.8
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 409..462
e-value: 1.8E-17
score: 62.6
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 158..305
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 374..470

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig499contigH-elongata_contig499:13647..20357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig499.12211.1mRNA_H-elongata_contig499.12211.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig499 13277..21031 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig499.12211.1 ID=prot_H-elongata_contig499.12211.1|Name=mRNA_H-elongata_contig499.12211.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=585bp
MVTNRPLIWWVFGVMCSRTSPSVGFTSPGYSGTRMQGAGDSFYSSERRLA
SPTDHASGICGRLSYSLCASRTSIVTLEKHTPSRPQSRRRARMSVKAPET
VIGLKQARRTRHCRGHAQRSGEPRARRSEGQLNGDGSLAEATLAADGARA
RLPRGKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEA
QRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKR
YRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGI
GEQSRVIRLPVHVQSFLDSVQRSSMKMAANGHLPTDNEIGEDLQTSAQKI
QFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGDSPEGLSHTS
DLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVR
QIESKAMNKLRQPYRNYRLRDHAGQLAGVEVLPQPAQEAVVAAATMIAVK
ESTNNARSRRGGSGGIDGVVPYSYPRLGAVSEEKPAQAAEKHSLEIESKR
RLLDKAWNQESEAMLHQLECELARCEQESLILAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR007627RNA_pol_sigma70_r2
IPR036388WH-like_DNA-bd_sf
IPR014284RNA_pol_sigma-70_dom
IPR007630RNA_pol_sigma70_r4
IPR013325RNA_pol_sigma_r2
IPR013324RNA_pol_sigma_r3/r4-like