mRNA_H-elongata_contig499.12211.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig499.12211.1
Unique NamemRNA_H-elongata_contig499.12211.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A6H5KA31_9PHAE (RNA_pol_sigma70 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA31_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 1.230e-97
Identity = 189/358 (52.79%), Postives = 249/358 (69.55%), Query Frame = 2 
Query:  848 VNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAANGHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGDSP--EGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDH-AGQLAGVEVLPQPAQEAVVAAATMIAVKESTNNARSRRGGSG 1912
            +N Y   LK+ +LL   EE+V+GR++QRG++ E  RDRLE   G+AP+ +EWA+ L L   ELL +L  A  AK  MISANLRLVVS+A+ YR +G+AFPDLIQEGT+GLVKA EKFNPE+GF+F TYA WWIK+SI+ GI  QSRVIRLP  V +FL S+++ + ++  +G +PTD E+G+ L  + +KIQ YR+AA  T S+SLD R     +V +    +L   + E  +P  E  +    ++ KV  LL TL  REQKVVRARYGLDG + +TL+EIGR+  +TRERVRQIESKA++KLRQPYRNYR+R+H  GQ+     L +PA EAV AA  +IA  E    A+ R+  SG
Sbjct:  240 LNVYFKTLKKIKLLKPDEEVVLGRQIQRGLQLERVRDRLETAHGAAPSCEEWASTLHLTKDELLRELAVADEAKEHMISANLRLVVSMARGYRGRGLAFPDLIQEGTMGLVKACEKFNPEMGFQFYTYAQWWIKKSILTGIANQSRVIRLPTQVHAFLSSIRKYTYELTVDGRVPTDEELGDKLGATVEKIQHYRQAALRTDSISLDTRASN--KVSDGAADDLGTQIGEKSTPNPEDATQAFYMKGKVTALLATLKDREQKVVRARYGLDGATSKTLEEIGRDLGLTRERVRQIESKALSKLRQPYRNYRVREHKVGQIFVDAGLREPASEAVAAARALIAEAEGLE-AKQRQPASG 594
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BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 5.550e-94
Identity = 168/319 (52.66%), Postives = 230/319 (72.10%), Query Frame = 2 
Query:  833 GKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMA-ANGHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGD-SPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRD 1783
            G G A+ FY+  + +  LL   EE+V+GR++Q+GV  E  RD L+  RG  P+ +EWA ALG+   EL+ +L  A +AK AM++ANLRLVVS+AKRYR++ ++F DLIQEGT GLVKA+EKF+PE GFKFSTYATWWIKQSI+ GI +QSR+IRLPVHV  FL+ V++++++M   NG LPTD+E+ E L+ SA +IQ+YR AA  T S+     I            E+   V   + +P+  + +  +++KV  LL TL  REQ+VV+AR+GL G  PRTL+E+GR+F +TRERVRQIE++A++KLRQPYRNYR+RD
Sbjct:   46 GGGDALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPSEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDDELAEHLEVSAVRIQYYRDAAQATLSMEAPRNIASKTSTSPGKKVEMGQGVSGPEKTPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRD 364
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BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 2.890e-93
Identity = 207/496 (41.73%), Postives = 293/496 (59.07%), Query Frame = 2 
Query:  413 MCSRTSPSVGFTSPGYSGTRMQGAGDSFYSSERRLASPT----DHASG-----ICGRLSYSLCASRTSIVT-------------LEKHTPSRPQSRRRARMSVKA------------PETVIGLKQARRTR---HCRGHAQRSGEPRARRSEGQLNGDGSLAEATLAADGARARLPRGKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMA-ANGHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGD-SPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRD 1783
            MC+   P+ GFT P     R+ GAGD+FYS+ERRLA+ +    D  SG     + GR + +   +R ++               ++   PSR  + R    +V A            P  + G+    R     +     ++   P   R +  + G G ++    A              A+ FY+  + +  LL   EE+V+GR++Q+GV  E  RD L+  RG  PT +EWA ALG+   EL+ +L  A +AK AM++ANLRLVVS+AKRYR++ ++F DLIQEGT GLVKA+EKF+PE GFKFSTYATWWIKQSI+ GI +QSR+IRLPVHV  FL+ V++++++M   NG LPTD E+ E L+ SA +IQ+YR AA  T S+     I            E+   V   + +P+  + +  +++KV  LL TL  REQ+VV+AR+GL G  PRTL+E+GR+F +TRERVRQIE++A++KLRQPYRNYR+RD
Sbjct:    1 MCASAPPAEGFTPP-VCLARVCGAGDAFYSAERRLAAGSGAGRDGGSGGRRGTMRGREAAAAPVARGALPAPPTRRRSTAARWMIQHPAPSRSAATRMMSAAVAAEPVEELDTLRPPPPQLPGMPFDMRDDSEFYLEMERKKEAGPTYTR-DSDMVGLGKVSTKKSAKRDGXXXXXXXXXDALAFYLRTVAKVDLLKPHEEIVLGRQIQKGVSYENTRDHLQLMRGYEPTEEEWAVALGMDREELVKELSRASKAKMAMLAANLRLVVSVAKRYRFQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKATLEMTDKNGKLPTDEELAEHLEVSAVRIQYYRDAAQATLSMEAPRTIASKTSTSPGKKVEMGQGVSGPEKTPDKQAQSDVMKQKVTELLMTLSIREQEVVKARFGLGGALPRTLEEVGRDFRLTRERVRQIEARALHKLRQPYRNYRVRD 494
[Close]
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.470e-78
Identity = 157/339 (46.31%), Postives = 226/339 (66.67%), Query Frame = 2 
Query:  788 EATLAADGARARLPRGKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSL--SLDARIRGNLR-VGENPNAELSDVVVEGDS-PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHA 1789
            +A+ + +G  A  P G  GA+++Y++ +    LL   EE+ +GR +Q G+  E A++ L  +    P+  EWAA +G+    L   +  + RAK  MISANLRL VSIAKRY+++G+A  DL+QEG+ GL+KA+E+F+P+ GFKFSTYATWWIKQSI+  I +QSR IRLPVHV   L+S++R++ +++   G  PTD E+   LQ   QKI+FYR+AA +  S+  SL+   +G+   +G   +  L D + + +  PE  +  S L+  +  LL TL  REQ+VVR R+GLD    RTL+EIG+ F +TRERVRQIES+A+ KLRQPYRN++LR +A
Sbjct:   39 DASASMNGGSAVSPVGA-GALSWYLSRMSAIDLLKPEEEVTLGRHIQLGLEWEAAKEELAVRLERQPSRAEWAAHMGVDEDTLKLIMIRSSRAKTTMISANLRLAVSIAKRYKHRGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLELGRTPTDEELSLRLQVPTQKIEFYREAARSVLSMEQSLNNARKGSAASLGGKSDMTLEDSLRDPEPLPEDRTQQSMLKENMSQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAYA 376
[Close]
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA)

HSP 1 Score: 264 bits (675), Expect = 6.060e-77
Identity = 155/332 (46.69%), Postives = 210/332 (63.25%), Query Frame = 2 
Query:  824 LPRGKGGA---VNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGDS------PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHA 1789
            +P G  G    +      +    LL   EE+ + R+++ G+  E AR+ L  +    P+  EWAA +G+    L   +  + RAK  MISANLRL VSIAKRYR +G+A PDLIQEG+ GL+KA+E+F+PE GFKFSTYATWWIKQSI+  I +QSR IRLPVHV  FL+SV+R++ +++   G  PTD E+   LQ +AQKI FYR AA +  S+            G +   + SD+ +E         PE  +  + L+  ++ LL TL  REQ+VVR R+GLD    RTL+EIG+ F +TRERVRQIES+A+ KLRQPYRN++LR +A
Sbjct:    6 MPTGSSGQPSQLQHLFKRMTSIDLLKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSARAKSTMISANLRLAVSIAKRYRRRGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLELGRHPTDEELAMRLQVTAQKIVFYRDAAQSVLSMEQSRNFASRKGSGASQGGK-SDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGLDDGRARTLEEIGQVFCVTRERVRQIESRALQKLRQPYRNHKLRAYA 336
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BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S2WX55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX55_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.330e-74
Identity = 143/322 (44.41%), Postives = 221/322 (68.63%), Query Frame = 2 
Query:  848 VNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLR----VGENPNAELSDVVVE-GDSPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQ 1795
            + ++  ++ Q+ LL A EE+++ R+VQ  +  E  RD L+ Q G  PT +EWA+++G+   EL   L   + AK+AMIS+NLRLV+SIAKRY+ +G+A  DLIQEG+LGLV+A EKF+PE GFKFSTY+TWWIKQ+I+  I +QSR IRLPVH+   L+++++ + ++  + G  PT+ E+ E +    +K++F ++ +    ++S+DA+ R   +     G+    +L D + + G  P  ++  + L+  +  L+ TL  REQ V+R R+GLD   P+TL+EIG  F +TRERVRQIE++A++KLRQPYRN++LR++AGQ
Sbjct:  160 LGWFFKSIGQHSLLRAEEEVLLARKVQAMIGWEDVRDGLKDQLGRPPTLEEWASSVGMQPDELRRKLLRGQSAKKAMISSNLRLVISIAKRYQKRGLALTDLIQEGSLGLVRAVEKFDPEKGFKFSTYSTWWIKQAILRAIADQSRTIRLPVHIHDLLNTMKKQTRELHVSLGRNPTNEELAERMNLPIEKLRFLQECSRP--AVSMDAQRRAMTKKSSSAGKGGEVQLGDSIKDDGPCPTQVTEANMLKEDIEKLVCTLSPREQDVIRMRFGLDADKPKTLEEIGNVFSVTRERVRQIEARALHKLRQPYRNHKLREYAGQ 479
[Close]
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S2KJI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJI8_9STRA)

HSP 1 Score: 250 bits (639), Expect = 6.370e-71
Identity = 144/327 (44.04%), Postives = 210/327 (64.22%), Query Frame = 2 
Query:  845 AVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARI-------RGNLRVGENPNAELSDVVVE-GDSPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQL 1798
            +++ Y+  +  + LL   EE+++ R +Q  ++ E  R+ LE++    PT+ EWA A+ L  P L   +R ++RAK A+I +NLRLVVSIAKRY  +G+ F DL QEGTLGL +A+EKF+PE GF+FSTYATWWIKQ I+  I +QSR IRLPVHV   L+ V+R + +++   G  PTD EI E  + + QK+ F RKA   T S+     +        G   +G+N    + D++ + G +P  L+    L+  V  +L TL  REQ V+R R+GLD    +TL+EIGR F +TRER+RQIE++A++KLRQPYRN+ ++ +  +L
Sbjct:   89 SISHYLKTMGNHDLLRREEEVILARHIQILIKWEEVREELESKLIRPPTYAEWAVAVNLDVPGLKRQIRRSQRAKAALIESNLRLVVSIAKRYVNRGMNFQDLCQEGTLGLTRATEKFDPERGFRFSTYATWWIKQGIMRAIADQSREIRLPVHVHDQLNGVRRVTKELSELLGRDPTDEEIAEKAKITVQKLTFLRKAQQGTISIETPMNMGAGKGSSSGGGSMGQNDKT-MGDLLRDSGPAPVDLASNEMLKDDVSRMLCTLSPREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIEARALHKLRQPYRNHSVKCYVEEL 414
[Close]
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A6V1X7N2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1X7N2_HETAK)

HSP 1 Score: 246 bits (627), Expect = 1.640e-69
Identity = 146/324 (45.06%), Postives = 202/324 (62.35%), Query Frame = 2 
Query:  857 YINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLAT-PELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAANGHL--PTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEG-DSPEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQLAGVEVL 1816
            Y+ +L+   +L A EE+++ R+++RG+  E A   LE   G  PT +EW   +GL +  ++  +L+ A ++K A+I+ANLRLVVS AK Y+Y+GV+F DL+QEGT GL KA+EKF+P  GF+FSTYATWWIKQ I+  + +QSRV+RLPVHV   L  ++R+        HL  PT  E+ E    + QKI FY        S+     I       E     +SD+  +  + PE  +    LR+ +  L+ TL  REQ VVR RYGLD    RTL+EIG  F +TRERVRQIE++A++KLRQPYRN+RL+   GQL  V+ L
Sbjct:   65 YVKDLRTVDMLTAQEEILLTRQIKRGMEIEKALVTLEKTLGRKPTEEEWVNFVGLKSIDDIRKNLKRASKSKSAIINANLRLVVSTAKAYQYRGVSFQDLVQEGTCGLHKATEKFDPRKGFRFSTYATWWIKQGIMRAVTDQSRVVRLPVHVHDALFHIRRAKANFWTE-HLREPTLAELAEATGLTPQKIVFYDTVKDKVSSIDKTVGIGTKTNSMEKSQIAISDMCKDSRNKPEETAQVESLRQDISRLINTLSPREQDVVRMRYGLDDGEIRTLEEIGSIFSVTRERVRQIEARALHKLRQPYRNHRLK---GQLDSVDAL 384
[Close]
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S1B782_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B782_9STRA)

HSP 1 Score: 248 bits (633), Expect = 4.370e-69
Identity = 141/321 (43.93%), Postives = 207/321 (64.49%), Query Frame = 2 
Query:  857 YINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKRY--RYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRG---NLRVGENPNAELSDVVVEGDS-PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQL 1798
            Y+ ++  + LL A EE+++ R VQ  ++ E  R+RLE +    PT+ EWAAA+G+ T +L   +R ++RAK AMI +NLRLV+SIAKRY  R   ++  DL QEG+LGLVKA EKF+PE GF+FSTYATWWIKQS++  I +QSR IRLPVH+   L++V++   ++    G  PT  EI E    +  K+QF  K++  T S   + R+ G              LSD + + +  PE  +  S ++  +  LL TL  REQ V+R R+GLD    +TL+EIG+ F +TRER+RQIE++A++KLRQPYRN++++ +  ++
Sbjct:  177 YLKSMGNHDLLTAQEEVLLARHVQLLLKWEEVRERLEIELARPPTYAEWAAAVGVDTKKLKRQIRRSQRAKAAMIESNLRLVISIAKRYTSRTNTLSVQDLCQEGSLGLVKAVEKFDPERGFRFSTYATWWIKQSVMRAIADQSRTIRLPVHIHDQLNTVRKHKRELTGKLGRQPTTEEIAEAAGITVDKLQFLWKSSRETMSFEQEIRVGGAGXXXXXXXXXTVILSDSITDKEHMPEEKAALSLMKDDIDRLLGTLSVREQDVIRMRFGLDDGKAKTLEEIGKRFRVTRERIRQIEARALHKLRQPYRNHQIKQYVNEM 497
[Close]
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Match: A0A7S4VUL7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUL7_9STRA)

HSP 1 Score: 244 bits (624), Expect = 7.990e-68
Identity = 138/338 (40.83%), Postives = 213/338 (63.02%), Query Frame = 2 
Query:  845 AVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEAQRGSAPTHDEWAAAL--GLATPELLADLRAAKRAKRAMISANLRLVVSIAKRYRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGIGEQSRVIRLPVHVQSFLDSVQRSSMKMAAN-GHLPTDNEIGEDLQTSAQKIQFYRKAAATTCSLSLDARIRGNLRVGENPNAE----------------LSDVVVEGDS-PEGLSHTSDLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVRQIESKAMNKLRQPYRNYRLRDHAGQL 1798
            ++  Y+  +  ++LL+  EE+++GRE+Q  V+ E  R+ LEAQ    PT+ EWAA++   ++ PE+   +R + RAK A+  +NLRLV+SIAKRY+ +G++  DL QEGTLGL +A EKF+PE GF+FSTYATWWIKQ+++  I +Q+R IRLPVH+   L+ ++++   +    G  PT  EI E +   A K++F ++AA    S+S++  +R +   G   +                  L D + + D  P  ++ T  L+  V  L+ TL+ REQ V+R R+GLD    +TL+EIGR F +TRER+RQIE++A++KLRQPYRN+ ++ +   L
Sbjct:  164 SIKSYMKVMANHELLNKNEEIILGREIQILVKWEEQRELLEAQLLRPPTYAEWAASIRSDMSVPEMKRQIRRSLRAKAALTESNLRLVISIAKRYQNRGLSMQDLCQEGTLGLTRACEKFDPERGFRFSTYATWWIKQAVMRAIADQARTIRLPVHIHDQLNQIRKAERDLHNELGREPTKEEISEKIGFKADKVEFLKRAAMG--SISMEMELRSSKTKGSGASTXXXXXXXXXXXXERGFTLEDTLKDPDQKPADIAATQMLKDDVSRLICTLNTREQAVIRMRFGLDDGKAKTLEEIGRRFSVTRERIRQIEARALHKLRQPYRNHSVKSYVKDL 499
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig499.12211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA31_9PHAE1.230e-9752.79RNA_pol_sigma70 domain-containing protein n=2 Tax=... [more]
D8LNI6_ECTSI5.550e-9452.66Chloroplast RNA-polymerase sigma factor n=1 Tax=Ec... [more]
A0A6H5K3H4_9PHAE2.890e-9341.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZES3_9STRA1.470e-7846.31RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A835ZBY3_9STRA6.060e-7746.69RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2WX55_9STRA2.330e-7444.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2KJI8_9STRA6.370e-7144.04Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6V1X7N2_HETAK1.640e-6945.06Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S1B782_9STRA4.370e-6943.93Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4VUL7_9STRA7.990e-6840.83Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig499contigH-elongata_contig499:13277..21031 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.1
Seed ortholog evalue2e-90
Seed eggNOG ortholog2880.D8LNI4
EggNOG free text desc.sigma factor activity
EggNOG OGs2QVXR@2759,COG0568@1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA polymerase sigma factor, region 2
Ec32 orthologEc-24_002960.1
Exons6
Model size2799
Cds size1755
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig499.12211.1prot_H-elongata_contig499.12211.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig499 13647..20357 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930822.0591655-UTR-H-elongata_contig499:13276..136461622930822.0591655-UTR-H-elongata_contig499:13276..13646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 13277..13646 +
1691679585.158615-UTR-H-elongata_contig499:13276..136461691679585.158615-UTR-H-elongata_contig499:13276..13646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 13277..13646 +
1622930822.1729577-UTR-H-elongata_contig499:20357..210311622930822.1729577-UTR-H-elongata_contig499:20357..21031Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 20358..21031 +
1691679585.2416456-UTR-H-elongata_contig499:20357..210311691679585.2416456-UTR-H-elongata_contig499:20357..21031Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig499 20358..21031 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930822.0774076-CDS-H-elongata_contig499:13646..137401622930822.0774076-CDS-H-elongata_contig499:13646..13740Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 13647..13740 +
1691679585.1754122-CDS-H-elongata_contig499:13646..137401691679585.1754122-CDS-H-elongata_contig499:13646..13740Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 13647..13740 +
1622930822.0915883-CDS-H-elongata_contig499:14388..152031622930822.0915883-CDS-H-elongata_contig499:14388..15203Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 14389..15203 +
1691679585.188243-CDS-H-elongata_contig499:14388..152031691679585.188243-CDS-H-elongata_contig499:14388..15203Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 14389..15203 +
1622930822.1045053-CDS-H-elongata_contig499:16588..167321622930822.1045053-CDS-H-elongata_contig499:16588..16732Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 16589..16732 +
1691679585.1971474-CDS-H-elongata_contig499:16588..167321691679585.1971474-CDS-H-elongata_contig499:16588..16732Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 16589..16732 +
1622930822.1206877-CDS-H-elongata_contig499:17514..176771622930822.1206877-CDS-H-elongata_contig499:17514..17677Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 17515..17677 +
1691679585.205766-CDS-H-elongata_contig499:17514..176771691679585.205766-CDS-H-elongata_contig499:17514..17677Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 17515..17677 +
1622930822.138486-CDS-H-elongata_contig499:19293..193341622930822.138486-CDS-H-elongata_contig499:19293..19334Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 19294..19334 +
1691679585.2184327-CDS-H-elongata_contig499:19293..193341691679585.2184327-CDS-H-elongata_contig499:19293..19334Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 19294..19334 +
1622930822.1565337-CDS-H-elongata_contig499:19859..203571622930822.1565337-CDS-H-elongata_contig499:19859..20357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 19860..20357 +
1691679585.2277641-CDS-H-elongata_contig499:19859..203571691679585.2277641-CDS-H-elongata_contig499:19859..20357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig499 19860..20357 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig499.12211.1

>prot_H-elongata_contig499.12211.1 ID=prot_H-elongata_contig499.12211.1|Name=mRNA_H-elongata_contig499.12211.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=585bp
MVTNRPLIWWVFGVMCSRTSPSVGFTSPGYSGTRMQGAGDSFYSSERRLA
SPTDHASGICGRLSYSLCASRTSIVTLEKHTPSRPQSRRRARMSVKAPET
VIGLKQARRTRHCRGHAQRSGEPRARRSEGQLNGDGSLAEATLAADGARA
RLPRGKGGAVNFYINNLKQYQLLDAGEELVMGREVQRGVRCELARDRLEA
QRGSAPTHDEWAAALGLATPELLADLRAAKRAKRAMISANLRLVVSIAKR
YRYKGVAFPDLIQEGTLGLVKASEKFNPELGFKFSTYATWWIKQSIVIGI
GEQSRVIRLPVHVQSFLDSVQRSSMKMAANGHLPTDNEIGEDLQTSAQKI
QFYRKAAATTCSLSLDARIRGNLRVGENPNAELSDVVVEGDSPEGLSHTS
DLRRKVMTLLETLDYREQKVVRARYGLDGLSPRTLKEIGREFDITRERVR
QIESKAMNKLRQPYRNYRLRDHAGQLAGVEVLPQPAQEAVVAAATMIAVK
ESTNNARSRRGGSGGIDGVVPYSYPRLGAVSEEKPAQAAEKHSLEIESKR
RLLDKAWNQESEAMLHQLECELARCEQESLILAL*
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mRNA from alignment at H-elongata_contig499:13277..21031+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig499.12211.1 ID=mRNA_H-elongata_contig499.12211.1|Name=mRNA_H-elongata_contig499.12211.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7755bp|location=Sequence derived from alignment at H-elongata_contig499:13277..21031+ (Himanthalia elongata Himel1 dioecious)
AACCTGTCCAGACCTCGGGCCCGACTCCTCCCCGTCGGGCAGGGAGAGTT
AAGTGCTAACTGCGTCCAACCCATCTTATTGATTTCCCCGGATCAAGCAG
CTTCACGTAAGGGAAATAATCCTTTTCTTAAAGCAAATCGCCCCAACCCA
AGCCTAGGACAGTTTTTGGATAAACGATCTTGAGGTCCTCAGCGTCCGGA
CGGGAAAGAGAGGAGGGCGAAAGGAGTACCCCAGCAAGGAAAACGAAGTG
TGGGAACGGGAGGAGTTGGTGGAGCCACAGTACACCGATACTGGAAACGG
AGTGCATACGACATCACCCCTGTTGCATAACGGGAGCTTGCTCCGTGGGG
GCAGGCGAAAGTTCGCAGCTATGGTCACCAACCGACCGCTCATTTGGTGG
GTCTTCGGAGTCATGTGCTCGCGGACTTCTCCATCTGTGGGCTTCACCTC
ACCTGGATACTCAGGTAAGCGTAAGTACATCTCCTCCGACGCCAGCTCTC
TCTACCTTATTTCCATCTTCGCCTCCAAGTCCTTCTACTTGTCATCAATA
TGTTTCGCTTCTATCCGCTTCTACCTACATGCTACCTGATATCGTCTACG
GCCTAGGGAAGATGACAAAAGAAGAGGCCCTCAAAAACCAAGAGGTTTTG
AAACTGCAAGGATAGTCTTATTGTAGTAGAAATACTACTCAAACCCTCCG
AACATCCACGCCTTCTTAGCACCGTGAGGGGTGCAGTCCAGGGGACTACC
TATCATCAGGTTCGAATTTGTACATTGCTACCTTTGAGCACAAAATCGTC
ACATGTGATAAATCATGTTCCACTCTAGTACTTTCATCGGGTCATGTCGG
GTATCCCATCATTAGCTCAACAATACGTAAAAATATTTATTACTAGAATA
TGATACTGTACTGGCAGACAGACCGCCCTCCACGCAACCAAGTTGAACAT
TCAGTTGCACTTCTGCCTCAACTTACGTATAGCTGTGGGATCCTTTCTGC
CTAAAATCCTGAACTAATTAAAACCCTCCAAACTTCCACACCCTCCCTAC
ATCGGCTTTGGTGAAAATATGGATGGGACAATATTTGGGGGGACGTGGCT
GCCCTACTCCAGGAACCCGGATGCAGGGAGCGGGGGACTCTTTCTACTCT
TCAGAGCGGCGATTAGCATCGCCCACCGACCACGCCTCAGGCATCTGCGG
GCGCTTGTCTTACTCGCTCTGCGCATCGAGGACATCGATAGTAACCCTTG
AAAAACACACACCAAGCCGACCCCAATCACGCCGCAGAGCTAGGATGTCC
GTGAAAGCCCCTGAGACAGTAATCGGACTGAAGCAGGCTCGGCGGACGAG
GCACTGCAGGGGTCATGCCCAACGCAGCGGAGAGCCGAGGGCTCGACGCA
GTGAGGGTCAGCTGAACGGCGACGGGTCGCTGGCGGAGGCGACGCTGGCA
GCAGACGGGGCGAGGGCAAGGCTACCACGCGGCAAGGGGGGTGCCGTAAA
CTTCTACATCAACAACCTCAAGCAGTACCAGCTGCTGGACGCTGGAGAGG
AGCTGGTCATGGGCCGGGAGGTCCAGAGGGGGGTACGCTGCGAGCTCGCG
CGGGATCGGCTCGAGGCGCAGCGAGGGTCGGCGCCGACACACGACGAGTG
GGCGGCAGCTCTCGGCCTCGCAACCCCGGAGCTTCTGGCTGACTTGAGGG
CGGCAAAAAGAGCGAAGAGGGCGATGATCTCGGCGAACCTAAGGCTGGTG
GTGAGCATCGCAAAACGCTACCGATACAAAGGGGTGGCGTTCCCCGACCT
GATTCAGGAGGGAACCTTAGGCTTGGTGAAGGCGTCGGAGAAGTTTAACC
CCGAGCTGGGGTTCAAGTTCTCCACATATGCCACATGGTGGATCAAGCAG
AGCATCGTGATCGGCATCGGCGAGCAGGTGTGTGTCACGATGGACAACAG
CTTTTGTCAGATGTTGCATTGGTCTGGGAAAAATAACAGAGAACAAGAGT
ATCTCCATAATCTACTTGAACCTTGCTGGACAGCAGTCCCATATTTTGAA
GGTTGGTATTTGCTCGCAGCAGCATTGTCCTTCGTTTTGTCACATGCTGC
GTGCTCTGGCTCCTTGCACGGAACATTCGTTACAAGCCCTTTGTCCCATC
CGCTGACGCCTACGCTATCAGAGTCCATCTGTGCGACAAGAGTGATGTGT
TTTATCAAGCCGTGTCCCGTCGAGTGAGGTCCTTCCTACTATTCATGATA
GGGTACAGGGTTACTATTCATGATAGGGTACAGGGTTACTATCTTACCTA
CGTGGAACTTCTAAGCCACACGGTTAACCACGATGTATGTAATCGGGTTT
GGGTTGGAGGGGTTGGATGTCCGTCATGACGGCGTGTGCCTCAGCCAAGC
AACGGCACTTCTCTGTTTTGTTTATGTAAAGTTGTTGACCAGTCTCATGT
TGTTCACGGCCCTTTGCTTCACATAATTTCTGAAACACACAAGAAAAACA
CTAACGTAAACTGTCTATGTTCTCTTCTTTGGTCATCGCGACCGGTACTT
TTGTATTAATATACACTATATATAATATAGCCCTATACAGGTAACAGCTG
TTTTCCACAACTTTAGTTTGGATAACGGCTTTTTCGATGACCAATGTAAC
CTTATACACTATATATATATGATAGAGCCCTTTACAGGTAACCCCAACGT
AGCCCCTGTGAAACGGACTTATATACCTAAATATCTAACCATTTCATGAG
CAACCACCTTCCCCCTGCTGATCAAAAAAAAAAAAAAAATGTTTATAAAT
AATAATAATCACTTTTTCTATACAATAGAGCCCTAATTACNNNNNNNNNN
TTCAGCCCCTGATATAGTTATTAGTAACACTAACATTAACATCATTATCA
TTACCATTGTTCCTGCTCATTCCTGCTTCCCGATAGTTGGTCCCCTGGAT
TGTACTTATGGTGACAAGAAGGTGCGGATGTTCGGCGAGTTAGAATGAGC
CTAAAGTCTTTTAAATCATAATAATATAGTCGACTGATCCTCAGAACTCC
GAGGGTATTTGATGATGTTCGTGTTGTATCCGTCGCGTCTATCCTGCACA
AATAAGACCACCTTGTACTGTAAAATATACGAACCGTACACCAGTACTTC
GCCACAAACAAAAAACAAAACAGTATCTGTGGATTGACTCTGCCGAGTAG
ATTACCCGACAGCCAACCCAGACCGCTCGATGAAGTAAACACCGACATAA
CGTGCCCCCGGCCCCTTCGTTCGCCCCGACCTGTCGCCCCTCCAAACCAT
GTCATAACCCAGAGTCGGGTGATCCGGCTGCCCGTGCACGTGCAAAGTTT
CCTGGACTCCGTCCAAAGGAGTTCCATGAAAATGGCCGCGAACGGACACC
TCCCGACAGACAACGAGATCGGGGAGGACCTCCAAACCTCGGCGCAGAAG
ATACAGGTAATTATCGTAGTTTCGAAGTAGTTTGGGCACGCAACCGCCGA
AGCTGAAAGGGGACCGACTACATCCTGAATGCTTATACGGAACCCCCCCC
CAAAAAAAAACAGCAACATATACGAGAGAACCCTACTCTACTCTACTCTT
TCTTTTTTATGTTTTGCCTATAGCGTCGATCTCTGCTCGTATCATACGTG
TTGTCTTTTTCCGTCTAGTGATACCCTGCTACCCTGTAAGCAGCAAACGG
TCTTTCAACCACGGAATATATTGGATCTCCGGTGATGATGGCTCCGGGTG
CGTACCCTCCCTTTCATATTACAGGGCACACGGCATAAGTGATTGGTCAG
CGGTTGCTAGACCCGTGCCGTGGTCACGCGACATACTTTATTTTTGGTTC
TTGTACTCTCTCTCTATATATATGTACCAGGAACTATACAAAAAACGTTT
TGCACGAAGCACTCCCGCTTGCGTGTTCCCCTGTTTGTAAAAGAGCGATT
TCGTTTACCTCTCGACCGCCAAGCACGGTACCGCTCTCTTAACGTTGAGA
TTGCGTGCTTTCTATCGTTACCGCGTTATCTACAGTACAGATGTTGTAGT
ACCACTCTATCATGCAGTACATTTATACATATAGTAGTATATATAATAAT
AACCAAAGTATAACAAAATTATGTAGGAATAGACCTAGCCAGCCTTGTAG
CAAGAACCGTGTCGATTTCCACCGTACCCGGCCCCGCCCTCGCAAGCCCT
CTCTCACGCATCACTGCGATGACCGGATGTGCGCGCAGTTTTACCGAAAG
GCGGCAGCAACGACCTGTAGCCTCAGCCTTGACGCAAGGATCCGGGGCAA
TCTTCGCGTCGGGGAAAATCCCAATGCCGAGCTGAGCGACGTGGTCGTGG
AGGGAGACAGCCCGGAAGGCCTTTCGCACACGTCGGATTTGAGGAGAAAA
GGTACTATTTCTGAATACATACTCTCACTTATCATGTCGTAAGTAAGTTT
CTCTCCAGCTGACAGAGAATAGCACACACCGGGGATGGACTTGCTCCCGT
CCCCCCAGCTCCCGCTTTATTAGTCATTGCAAAAAGTAAAGAGGTTGTAA
ATGTAGTTTTTGCATATATACCTGAAGACCATGCCCCGACTGATTGTAAC
TGGGTACCCCGCCTACAGTACTCTCTCGCTCATTGGCTGCAACTACGAGG
ATTTATATTTTATAAAAATATCTCTAAATAATCTTGTACTGGCGACCTTA
CCTTGCTTAGACTCTCCACCAATAATAATGTTTATTTACACCACGTGGAA
TGCCCTTGGATACATAGTTTTAGTGTTAGTGTTGGACTCCTAAAATATAA
AATGTGTACCTCACGCGTTAAAGTTCGGATGACCTACTGGCTGATTGTGG
TAATAGTCTATGACCCTCTTAACTCTTTTTTATTTCTTCTCTTCAGTTAA
AAATAATCTAAAGACACTACTAATAATGTCACCTACCCTTCAGATTAGGC
AACAATATGCTTACAGAAAAAAAGGAAAAAAAACTTCTGTTGACGTCCGT
ACCGTGCTGTTTCGGTTGACATACTGGTAAACCGTGGTCTTTGACCCTTT
TAACTTTTTTCTCCCTCCCGATTTAACTGAGACATATGTGCAATGCTGTG
CTTAACCCTTCCTAACCACCACACACAATTCACCCCCTAGTCTCCGGTTT
GGCGTCCCCATATATAATGACTAATCACGTGTTACGATTTTGTGCTCAAA
TGTAGTAATGTCCACATTAGAACCTGACTATAGTTGGTCCCATGGACTAC
ACCTCTCATGATGCTAAGAAGGCGTGGATATTCGGAGGGTTGGAATGAGT
TTATATGTTTTTTAATAATAAATATAGGGGGTGATATTTTTTCAAATGGG
CTTCATTTGTTGTTGCTGCGTGAGAAATTTCCAGTAAAATTGAATAGACA
CGGCTACCCCCAGGGGCGGAGGAAGGTGTTGAGAGCTTTCCCCTGTCATC
CAGCGTACGGTTGATTATTTCCTTTTTGTCTTAGAAAGAGCGTGTCTACG
AACAGGCTTCAGCAGCTCGCGTGTACGCGCCTTACTCGTTTTTTTCTGTC
TAGCATTGTTAAGATCTCTGTGACGACGGGCGTATGACGTTTTGAGTTTT
GGCCTATCCGGGAGTTAGAGAGGTTGGAAGGGAGGTGTTGTCGACTACCC
CTTTTGCCAAATGTCTGAATATTTCCTGTGAAACTTCCAATCATTTCAAG
AAACCATCTCATTCCCTCTCTCGTGCGAGATATGTTCAAAAGAATCATCT
CTTTCGCTCTCTCGATCTCGATGTATATTGCTCTCCTGGCTTCAATTCTT
CCGCGACGCGCTTTCATTTGGCGATTTTTTGCTATAATCCTCCCCGCGCC
TCGGTCCACCCACTGTCTTGTCGTATCTAATCGATGACTGTACGTTGGCT
TCAAAGAGATGGCGCTTTTTCTTGAACGTCCTTTGCTGAGCCATTTTCTC
TCGATCGGTGCCGCCCTGTCTGTGCCTTGCCATGCGCCGTTCGTTGGTTT
ATTCCGTGTCCCTGCAGTCATGACGCTGCTAGAGACGCTTGACTATAGGG
AACAGAAGGTGCGATTCGCGACGGCCTCTTATTTTCCTCACGTCGTGCTC
ATCCCCATGGTGCCGTAGATTACAGTGGTTGCGTGTATAACACACCCAGG
GGATCCCCCTCCCTCCTCCCCTCCAGCTGTCTTGACCAAGAGGCGGCAAC
AGCGCCACAAGATTATTTTTTGCGAATCGAAAGTTTAGAGCGAGATGTTT
TCCAAATCCACCGCGTTTGCTGTCGCTGTGTCCCGGTTTGGGGAGAAAAC
CGAGCGAGACCACCCATCCCCTATCCCGAGGCGGGCCGTCATATACCCAT
TTCACTCATGGCAAAGAGGGGCAGGGATGGGGGAAAGGAGGACAATTGAT
GCTGTTCCAACCGGTTTTCGCCTCACTCATCATACATGAGTAGCTTGGCG
CATATCCAACCTCCTGGTGTAGCGAGGTTTGATGGTCATAATTTTAAACC
GCGAAAACTAAACTACTTGTACATCCTTGGCATTCACTCACCCCCAAATT
CACACGGCGCGGGTAATCGCCTTGATGCTGCAGGTGGTGCGGGCGCGTTA
CGGACTGGACGGACTGAGCCCGAGAACTCTGAAGGAGATCGGGCGCGAGT
TCGACATCACCCGCGAGAGAGTGCGCCAGATCGAATCCAAGGCGATGAAC
AAGCTGCGGCAGCCGTATAGAAACTATCGCCTACGCGACCACGCGGGCCA
GCTGGCGGGGGTCGAGGTGTTGCCACAGCCCGCGCAGGAGGCGGTTGTCG
CTGCCGCGACAATGATCGCCGTGAAAGAGTCTACGAACAATGCGAGGTCG
CGCAGAGGTGGTAGCGGCGGCATTGACGGTGTTGTTCCTTATTCGTATCC
AAGACTTGGGGCGGTGTCGGAAGAGAAGCCCGCGCAGGCCGCTGAGAAAC
ATTCGCTGGAGATCGAGTCCAAGCGACGACTGCTCGACAAGGCGTGGAAT
CAGGAGTCGGAGGCCATGCTCCACCAGCTAGAGTGCGAGCTGGCTCGCTG
CGAGCAGGAGTCGCTGATCTTGGCTCTGTAGAGGTGTTGGTGTTTGTCGG
GTGTGCTGAGAGAACCGCGGTCGACGAAGGGCGGCGACGGTGCGTCGACC
CCTGACGGCGTAAATACAGTGCTGGTTGGAATTTTGTAAGATTAAAAAAA
AGTTCTGAACAAGTAAGGTAGAAGAGCCTGCATCAGTCCCCCATTGTGCA
TCTAAACCGACAAGTGGGATGATTCGTGTAAGCGGTATGTGCGGCGCAGA
AAGGCCGTTTCCGTTAAGTAGTGGCTTGCGTTGGGCACCGGTGTGAATCG
GCCCCCCGTGTTCGTCCCAGAGTTGCCTTTGTTCTCGAAGCGTGCATTTT
TTTAAGGTGAAGGTTGGGTCACATCCTTAAAAACTCTCCTCACCACAACA
TCGTGTCATTTTGGAGGAGGGTTTCAAAGGAGGCGTTCTCGGCGCAAGGT
GTGTGGATTGCCGGCCATTCTGATGGCACTTGGGACCTGACGGAGACGCA
ACTTTGAGCAGGCTATCCGTTTCTCAGGTTCGATTACTCACTCGCCTTCG
CCGTTCTTCGTGTTACACACCAACAGCGGTGATGTTATGAACTTTCTATT
AATGGCTTATTTACTGAGTGTAGATGATACCGCTTTTTTTGTTTTTGGTC
GCACTTTTAGCAGAAGGAAGAGCCGGATATGGTTGCCTTCTGCTCGTGGT
CAGCT
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Coding sequence (CDS) from alignment at H-elongata_contig499:13277..21031+

>mRNA_H-elongata_contig499.12211.1 ID=mRNA_H-elongata_contig499.12211.1|Name=mRNA_H-elongata_contig499.12211.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3510bp|location=Sequence derived from alignment at H-elongata_contig499:13277..21031+ (Himanthalia elongata Himel1 dioecious)
ATGGTCACCAACCGACCGCTCATTTGGTGGGTCTTCGGAGTCATGTGCTC
GCGGACTTCTCCATCTGTGGGCTTCACCTCACCTGGATACTCAGATGGTC
ACCAACCGACCGCTCATTTGGTGGGTCTTCGGAGTCATGTGCTCGCGGAC
TTCTCCATCTGTGGGCTTCACCTCACCTGGATACTCAGGAACCCGGATGC
AGGGAGCGGGGGACTCTTTCTACTCTTCAGAGCGGCGATTAGCATCGCCC
ACCGACCACGCCTCAGGCATCTGCGGGCGCTTGTCTTACTCGCTCTGCGC
ATCGAGGACATCGATAGTAACCCTTGAAAAACACACACCAAGCCGACCCC
AATCACGCCGCAGAGCTAGGATGTCCGTGAAAGCCCCTGAGACAGTAATC
GGACTGAAGCAGGCTCGGCGGACGAGGCACTGCAGGGGTCATGCCCAACG
CAGCGGAGAGCCGAGGGCTCGACGCAGTGAGGGTCAGCTGAACGGCGACG
GGTCGCTGGCGGAGGCGACGCTGGCAGCAGACGGGGCGAGGGCAAGGCTA
CCACGCGGCAAGGGGGGTGCCGTAAACTTCTACATCAACAACCTCAAGCA
GTACCAGCTGCTGGACGCTGGAGAGGAGCTGGTCATGGGCCGGGAGGTCC
AGAGGGGGGTACGCTGCGAGCTCGCGCGGGATCGGCTCGAGGCGCAGCGA
GGGTCGGCGCCGACACACGACGAGTGGGCGGCAGCTCTCGGCCTCGCAAC
CCCGGAGCTTCTGGCTGACTTGAGGGCGGCAAAAAGAGCGAAGAGGGCGA
TGATCTCGGCGAACCTAAGGCTGGTGGTGAGCATCGCAAAACGCTACCGA
TACAAAGGGGTGGCGTTCCCCGACCTGATTCAGGAGGGAACCTTAGGCTT
GGTGAAGGCGTCGGAGAAGTTTAACCCCGAGCTGGGGTTCAAGTTCTCCA
CATATGCCACATGGTGGATCAAGCAGAGCATCGTGATCGGCATCGGCGAG
CAGGAACCCGGATGCAGGGAGCGGGGGACTCTTTCTACTCTTCAGAGCGG
CGATTAGCATCGCCCACCGACCACGCCTCAGGCATCTGCGGGCGCTTGTC
TTACTCGCTCTGCGCATCGAGGACATCGATAGTAACCCTTGAAAAACACA
CACCAAGCCGACCCCAATCACGCCGCAGAGCTAGGATGTCCGTGAAAGCC
CCTGAGACAGTAATCGGACTGAAGCAGGCTCGGCGGACGAGGCACTGCAG
GGGTCATGCCCAACGCAGCGGAGAGCCGAGGGCTCGACGCAGTGAGGGTC
AGCTGAACGGCGACGGGTCGCTGGCGGAGGCGACGCTGGCAGCAGACGGG
GCGAGGGCAAGGCTACCACGCGGCAAGGGGGGTGCCGTAAACTTCTACAT
CAACAACCTCAAGCAGTACCAGCTGCTGGACGCTGGAGAGGAGCTGGTCA
TGGGCCGGGAGGTCCAGAGGGGGGTACGCTGCGAGCTCGCGCGGGATCGG
CTCGAGGCGCAGCGAGGGTCGGCGCCGACACACGACGAGTGGGCGGCAGC
TCTCGGCCTCGCAACCCCGGAGCTTCTGGCTGACTTGAGGGCGGCAAAAA
GAGCGAAGAGGGCGATGATCTCGGCGAACCTAAGGCTGGTGGTGAGCATC
GCAAAACGCTACCGATACAAAGGGGTGGCGTTCCCCGACCTGATTCAGGA
GGGAACCTTAGGCTTGGTGAAGGCGTCGGAGAAGTTTAACCCCGAGCTGG
GGTTCAAGTTCTCCACATATGCCACATGGTGGATCAAGCAGAGCATCGTG
ATCGGCATCGGCGAGCAGAGTCGGGTGATCCGGCTGCCCGTGCACGTGCA
AAGTTTCCTGGACTCCGTCCAAAGGAGTTCCATGAAAATGGCCGCGAACG
GACACCTCCCGACAGACAACGAGATCGGGGAGGACCTCCAAACCTCGGCG
CAGAAGATACAGAGTCGGGTGATCCGGCTGCCCGTGCACGTGCAAAGTTT
CCTGGACTCCGTCCAAAGGAGTTCCATGAAAATGGCCGCGAACGGACACC
TCCCGACAGACAACGAGATCGGGGAGGACCTCCAAACCTCGGCGCAGAAG
ATACAGTTTTACCGAAAGGCGGCAGCAACGACCTGTAGCCTCAGCCTTGA
CGCAAGGATCCGGGGCAATCTTCGCGTCGGGGAAAATCCCAATGCCGAGC
TGAGCGACGTGGTCGTGGAGGGAGACAGCCCGGAAGGCCTTTCGCACACG
TCGGATTTGAGGAGAAAAGTTTTACCGAAAGGCGGCAGCAACGACCTGTA
GCCTCAGCCTTGACGCAAGGATCCGGGGCAATCTTCGCGTCGGGGAAAAT
CCCAATGCCGAGCTGAGCGACGTGGTCGTGGAGGGAGACAGCCCGGAAGG
CCTTTCGCACACGTCGGATTTGAGGAGAAAAGTCATGACGCTGCTAGAGA
CGCTTGACTATAGGGAACAGAAGTCATGACGCTGCTAGAGACGCTTGACT
ATAGGGAACAGAAGGTGGTGCGGGCGCGTTACGGACTGGACGGACTGAGC
CCGAGAACTCTGAAGGAGATCGGGCGCGAGTTCGACATCACCCGCGAGAG
AGTGCGCCAGATCGAATCCAAGGCGATGAACAAGCTGCGGCAGCCGTATA
GAAACTATCGCCTACGCGACCACGCGGGCCAGCTGGCGGGGGTCGAGGTG
TTGCCACAGCCCGCGCAGGAGGCGGTTGTCGCTGCCGCGACAATGATCGC
CGTGAAAGAGTCTACGAACAATGCGAGGTCGCGCAGAGGTGGTAGCGGCG
GCATTGACGGTGTTGTTCCTTATTCGTATCCAAGACTTGGGGCGGTGTCG
GAAGAGAAGCCCGCGCAGGCCGCTGAGAAACATTCGCTGGAGATCGAGTC
CAAGCGACGACTGCTCGACAAGGCGTGGAATCAGGAGTCGGAGGCCATGC
TCCACCAGCTAGAGTGCGAGCTGGCTCGCTGCGAGCAGGAGTCGCTGATC
TTGGCTCTGTAGGTGGTGCGGGCGCGTTACGGACTGGACGGACTGAGCCC
GAGAACTCTGAAGGAGATCGGGCGCGAGTTCGACATCACCCGCGAGAGAG
TGCGCCAGATCGAATCCAAGGCGATGAACAAGCTGCGGCAGCCGTATAGA
AACTATCGCCTACGCGACCACGCGGGCCAGCTGGCGGGGGTCGAGGTGTT
GCCACAGCCCGCGCAGGAGGCGGTTGTCGCTGCCGCGACAATGATCGCCG
TGAAAGAGTCTACGAACAATGCGAGGTCGCGCAGAGGTGGTAGCGGCGGC
ATTGACGGTGTTGTTCCTTATTCGTATCCAAGACTTGGGGCGGTGTCGGA
AGAGAAGCCCGCGCAGGCCGCTGAGAAACATTCGCTGGAGATCGAGTCCA
AGCGACGACTGCTCGACAAGGCGTGGAATCAGGAGTCGGAGGCCATGCTC
CACCAGCTAGAGTGCGAGCTGGCTCGCTGCGAGCAGGAGTCGCTGATCTT
GGCTCTGTAG
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