prot_H-elongata_contig499.12210.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig499.12210.1
Unique Nameprot_H-elongata_contig499.12210.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length315
Homology
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: D8LNI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI5_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 1.340e-115
Identity = 191/307 (62.21%), Postives = 224/307 (72.96%), Query Frame = 0
Query:   16 ALGLANISRIDALIVPGAL--FPAPFHAPLST---HVSRIASWRGGAVERDAGRSPTMNVQLGLVRVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVAR---KKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRTAEVRRAVEDRVHRAAPSA 314
            A+GLA      AL+ P  L    A  HA  +    HV +IASWRGGAVE   G  P MNVQLGLVRVAGYGIIAGS+CLKTPQIARVW A+SL GLAPAS+YADVFLFATSV+YHVLK+NPIRAYGESV++L QT++MV L+WRFG ++       GG     V +   K +PAGGG +GRT IV GS  A  L + YLP  +WGLL++ STP ILAVQLPQI+KN  QKHTGELAVLTV LA +GSSIR  TT+ADLGGDPWLLFNY+LG  +N  +L QI  YR+ TA V R VE + H+AA +A
Sbjct:   11 AVGLAAAPTGCALVPPTPLPRTTAGGHAAATARGKHVRQIASWRGGAVESSEGGPPLMNVQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKKNPIRAYGESVVVLFQTLVMVGLLWRFGAEEEVAVSDGGGDEEALVTKSTKKVKPAGGGPVGRTAIVAGSVAASVLCVLYLPERLWGLLVIVSTPTILAVQLPQIWKNWRQKHTGELAVLTVLLAFVGSSIRIATTIADLGGDPWLLFNYVLGATSNATILAQIYLYRALTATVGRDVEAKAHKAAHAA 317          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A6H5K508_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K508_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 6.410e-101
Identity = 163/253 (64.43%), Postives = 193/253 (76.28%), Query Frame = 0
Query:   68 MNVQLGLVRVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDD---VGIGKASGGKSGGEVAR---KKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRTAEVRRAVEDRVHRAAPSA 314
            MN QLGLVRVAGYGIIAGS+CLKTPQIARVW A+SL GLAPAS+YADVFLFATSV+YHVLKRNPIRAYGESV++L QT++MV L+WRFG ++   V  G          V +   K +PAGGG LGRT I +GS  A  L + YLP  +WGLL+V STP ILAVQLPQI+KN  QKHTGELA+LTV LA  GSS+R  TT+ADLGGDPWLLFNY+LG  +N  +L QI  YR+ TA+VRR V+ +  +A  +A
Sbjct:    1 MNAQLGLVRVAGYGIIAGSLCLKTPQIARVWHAKSLVGLAPASIYADVFLFATSVIYHVLKRNPIRAYGESVVVLFQTLVMVGLLWRFGTEEEVAVSDGXXXXXXXXALVTKSIKKVKPAGGGPLGRTAIAVGSVAASVLCVLYLPERLWGLLVVVSTPTILAVQLPQIWKNWRQKHTGELAMLTVLLAFGGSSVRIATTIADLGGDPWLLFNYILGATSNATILAQIYLYRALTAKVRRDVKAKADKATHAA 253          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A836CGJ2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.940e-36
Identity = 92/223 (41.26%), Postives = 124/223 (55.61%), Query Frame = 0
Query:   76 RVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALTM-QYLPPSMWG-LLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRT 296
            ++AG GII GS+ +K PQI R+  ARS+ GL+  + Y +V L +  V+YH  K  P  AYGE+  +LVQ +I+VALMWR+    +                K R           +   +AT VAL +  Y  P  W  LL++SSTP IL V +PQI  N  Q HTG+++ +TV L L GS+IR  TTL ++G D  LL NY LG V NG+L+ Q    R  T
Sbjct:   51 KLAGLGIIVGSMGMKLPQIMRILEARSVLGLSLTANYFEVPLVSNGVIYHFKKGYPFSAYGENAFLLVQNLIVVALMWRYSAPPM----------------KHR----------AMAAMTATFVALCVGTYSLPDRWQPLLVLSSTPLILLVTIPQILVNARQGHTGQMSAITVALKLGGSAIRLATTLIEIGVDRALLLNYGLGTVLNGVLMAQWYLMRDAT 247          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A485KEC0_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KEC0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 9.750e-33
Identity = 85/223 (38.12%), Postives = 124/223 (55.61%), Query Frame = 0
Query:   76 RVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALT--MQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRT 296
            +V GY II GS  LK PQI ++  A ++AGL P+S Y +V  F  SV+Y+V++  PI  +GES+ IL+Q +I+VA++W +                      K PA       +T +LG AT VAL   M +LP     +L  SS P  +  ++PQI+ N  Q HTG+LA +T+FL   GS+ R +TTL + G D  +L  +L+ ++ NG L+ QI  Y   T
Sbjct:   42 KVLGYLIILGSFILKVPQILKIVAAGNVAGLNPSSFYLEVITFQASVVYNVIRGYPISTWGESLTILIQNIILVAMLWVY---------------------SKAPA-------STQLLGVATFVALGAGMLHLPSEFDWVLPASSIPLSVMARIPQIFSNFKQGHTGQLAFITLFLNFGGSAARLFTTLQETG-DQVVLLGFLISMLLNGTLIAQILIYWKAT 235          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: L1ID68_GUITC (Mannose-P-dolichol utilization defect 1 protein homolog n=3 Tax=Guillardia theta TaxID=55529 RepID=L1ID68_GUITC)

HSP 1 Score: 127 bits (320), Expect = 1.280e-31
Identity = 83/259 (32.05%), Postives = 137/259 (52.90%), Query Frame = 0
Query:   41 APLSTHVSRIASWRGGAVERDAGRSPTMNVQLGLVRVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRTAEV 299
            A +S+HV +  +    A E        + +Q+ + +  GYGI+ GS+ L+ PQ+ R+  +RS+ GL+  + Y++V + ++SV+YH L   P+  YGE++++L+Q +I+VAL+W +    V + +                    L    + V+  A  ++L  + LP   W  LI  + P I    +PQI  N  Q HTG+L++LT FL L+G  +R +TT+  +G DP LL  Y  G   N  L+ Q   YR  TA++
Sbjct:    5 ATISSHVQQQVALLASASE--------VQLQVMVSKFLGYGILVGSLFLQVPQLLRILLSRSVVGLSATARYSEVPINSSSVIYHFLLGYPLACYGENIVVLIQNLIVVALIWAWRTPRVPVREM-------------------LFCTLSFVVLCAAQLSLPKELLP---W--LIYVNIPFIFGSTVPQILANARQGHTGQLSILTCFLKLVGCCVRIFTTITQIGLDPGLLLGYFAGASMNLTLVLQGFYYRDATAQL 231          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A7S2BZY0_9STRA (Solute carrier family 66 member 3 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZY0_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.030e-28
Identity = 72/226 (31.86%), Postives = 123/226 (54.42%), Query Frame = 0
Query:   74 LVRVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRTAEV 299
            + ++ GYGI+A +  LK PQI +V +A++  GL+  +LY DVFL+  + MY++   NP+ A+GE +I++VQ + +V L+WR+ +    +   +G                        VL  A  VA+++  LPP    LL   + P ++  ++ QI KN+   HTG L+  ++ + +    +R +TT+  +G D  +L  Y L V +NG+LL QI  Y + T++V
Sbjct:    3 IAKILGYGILASNTTLKVPQIRKVVQAKATTGLSAMALYLDVFLYLNAAMYNITMGNPLSAWGELLIVIVQNVALVLLLWRYSLPAPSLAAKAG-----------------------AVLMLAAHVAISLN-LPPGYRYLLPTLNLPCMIITRIAQIRKNMANGHTGLLSTTSLVMNISTVLVRVFTTVVLVGWDWNILRAYGLSVTSNGVLLGQIAYYGANTSKV 204          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A6T7RA07_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A6T7RA07_9CRYP)

HSP 1 Score: 120 bits (302), Expect = 2.420e-28
Identity = 72/228 (31.58%), Postives = 121/228 (53.07%), Query Frame = 0
Query:   68 MNVQLGLVRVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSR 295
            + +Q+ + +  GYGI+ GS+ L+ PQ+ R+  +RS+ G++  + Y++V + ++SV+YH L   P+  YGE++++L+Q +I+VAL+W +    V + +                            L S   + +    LP  +   LI  + P I    +PQI  N  Q HTG+L++LT FL L+G  +R +TT+  +G DP LL  Y+ G   N   LT +R+ R R
Sbjct:   71 VKLQVLVSKFLGYGILVGSLFLQVPQLLRILLSRSVVGISATARYSEVPINSSSVIYHFLLGYPLACYGENIVVLIQNLIVVALIWAWRTPRVPVREM------------------------VFCLVSFALLCVCQLSLPKELLPWLIYVNIPFIFGSTVPQIVANARQGHTGQLSILTCFLKLVGCCVRIFTTITQIGLDPGLLLGYIAGATMN---LTLVRSERVR 271          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A2D4BSI9_PYTIN (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSI9_PYTIN)

HSP 1 Score: 116 bits (291), Expect = 1.960e-27
Identity = 71/221 (32.13%), Postives = 112/221 (50.68%), Query Frame = 0
Query:   76 RVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRT 296
            ++ GY II GS  LK PQI ++  A+ + GL PAS Y +V L+A+  +Y++LK  PI  +GE+++ILVQ +I+V L+W +    + I                         R  +V+  A   A  +   P   W      + P  +  ++PQ+  N  Q HTG+LA +T+ L   G+  R +TTL + G DP  L  + + +V NG+L+ Q+  Y   T
Sbjct:   37 KLLGYAIITGSFVLKLPQILKILSAKDVTGLTPASFYLEVLLYASGTIYNLLKGYPISTWGENIVILVQNLILVLLLWAYATPRIPIST-----------------------RLVLVVVLAVLSAGMLMTPPEFQWP-----AVPVTIVARIPQVVANFKQGHTGQLAFVTLALNFGGTVARLFTTLQETG-DPVQLAGFGVAIVLNGLLVLQVLLYWGAT 228          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A8K1CVN7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVN7_PYTOL)

HSP 1 Score: 115 bits (288), Expect = 6.460e-27
Identity = 69/221 (31.22%), Postives = 113/221 (51.13%), Query Frame = 0
Query:   76 RVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRT 296
            ++ GY II GS  LK PQI ++  A+ + GL P S Y +V L+ +  +Y+VLK  P+  +GE+++ILVQ +I+V L+W +    + I                         R  +V+ +  AV   M   PP +  +L+ +  P  +  ++PQ+  N  Q HTG+LA +T+ L   G+  R +TTL + G D   L    + +V NG+L+ Q+  +   T
Sbjct:   41 KLLGYAIITGSFVLKLPQILKIIGAKDVTGLTPTSFYMEVLLYVSGTVYNVLKGYPVSTWGENLVILVQNIILVLLLWAYSTPKIPIST-----------------------RLALVV-TFVAVTTGMLLTPPELQWVLVSAGIPVTIVARIPQVISNFKQGHTGQLAFVTLVLNFGGTIARLFTTLQETG-DQVQLIGLGVAIVLNGLLVLQVLLFWGAT 236          
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Match: A0A024FT87_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FT87_9STRA)

HSP 1 Score: 116 bits (290), Expect = 7.810e-27
Identity = 73/227 (32.16%), Postives = 122/227 (53.74%), Query Frame = 0
Query:   70 VQLGLVRVAGYGIIAGSVCLKTPQIARVWRARSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVALMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVALTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLALLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRT 296
            ++L + ++ G+ II GS+ LK PQI ++  A+ + GL PAS Y +V L+ +  +Y++L+  P+  +GE+++ILVQ +++V L++ F V  + I K S                       +++LG    +A  M +LP     +L  ++ P  +  + PQ+Y N    HTG+LA LT+ L   GS  R +TTL + G D   L  Y + +  NGIL+ Q+  Y + T
Sbjct:   77 LKLLISKLLGFAIIGGSLILKLPQIVKILAAQDVTGLTPASFYLEVILYLSGTIYNILREYPVSTWGENLVILVQNLLLVLLIFTFHVPRISITKRS---------------------VLSMLLGG---LAFCMYHLPSQYQWILPSAAIPITIFARAPQVYTNYKHGHTGQLAFLTLLLNFGGSLARLFTTLQETG-DLLQLTGYGVAICLNGILVFQVILYWNAT 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig499.12210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNI5_ECTSI1.340e-11562.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K508_9PHAE6.410e-10164.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CGJ2_9STRA4.940e-3641.26Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A485KEC0_9STRA9.750e-3338.12Mannose-P-dolichol utilization defect 1 protein ho... [more]
L1ID68_GUITC1.280e-3132.05Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A7S2BZY0_9STRA1.030e-2831.86Solute carrier family 66 member 3 n=1 Tax=Florenci... [more]
A0A6T7RA07_9CRYP2.420e-2831.58Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A2D4BSI9_PYTIN1.960e-2732.13Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A8K1CVN7_PYTOL6.460e-2731.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024FT87_9STRA7.810e-2732.16Mannose-P-dolichol utilization defect 1 protein ho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 75..131
e-value: 2.6E-7
score: 30.3
coord: 214..264
e-value: 2.7E-9
score: 36.7
IPR016817Mannose-P-dolichol utilization defect 1 proteinPANTHERPTHR12226MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATEDcoord: 68..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 206..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 293..314
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.687
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 210..227
NoneNo IPR availableTMHMMTMhelixcoord: 269..286
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 240..259
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 184..206
NoneNo IPR availableTMHMMTMhelixcoord: 72..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig499contigH-elongata_contig499:9567..12966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig499.12210.1mRNA_H-elongata_contig499.12210.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig499 9334..13012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig499.12210.1 ID=prot_H-elongata_contig499.12210.1|Name=mRNA_H-elongata_contig499.12210.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=315bp
MASAMERVRWMLVVFALGLANISRIDALIVPGALFPAPFHAPLSTHVSRI
ASWRGGAVERDAGRSPTMNVQLGLVRVAGYGIIAGSVCLKTPQIARVWRA
RSLAGLAPASLYADVFLFATSVMYHVLKRNPIRAYGESVIILVQTMIMVA
LMWRFGVDDVGIGKASGGKSGGEVARKKRPAGGGLLGRTTIVLGSATAVA
LTMQYLPPSMWGLLIVSSTPAILAVQLPQIYKNLWQKHTGELAVLTVFLA
LLGSSIRTWTTLADLGGDPWLLFNYLLGVVTNGILLTQIRAYRSRTAEVR
RAVEDRVHRAAPSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt
IPR016817MannP-dilichol_defect-1