prot_H-elongata_contig4937.12123.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4937.12123.1
Unique Nameprot_H-elongata_contig4937.12123.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length546
Homology
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BLAST of mRNA_H-elongata_contig4937.12123.1 vs. uniprot
Match: A0A6H5KR77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR77_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 6.890e-6
Identity = 83/293 (28.33%), Postives = 115/293 (39.25%), Query Frame = 0 
Query:  303 SPLSSSEGLIT-PSLAGIPLPPVTSARQRVNFIGKLPPVSG---DDLVIANQDEADKAAALDGKPANTNLPK-----RATISLYSGQLASETCPVVASPFDSGLLSLLSTTSTQRCTDD-----IGCEDSERGTPGEMTR-------GEFTSGTLLRRRLRLSNEDMSEMEV----------------------RTTPPESPKQHQGQEEENATRRLELEVGDER-------LSEGVHGGCSDIGERFPRSDLEHEIDEGTISTG-SSIGEHIQFEQESDLDDSRGLGDDVLW 544
            SPL+S  GL +  SLAG+P PP+  ARQR+  +G LPPV G     LV+    +A  A   + K       +      AT         S       SP  SG    +S  +T   T +     +G         G+  R       G F++   ++++                                     +PP SPKQHQGQEEE+A R L   +G +R       ++     G  D+G  F  SD   E+ E  I    SS+GE I FEQES    +   GDD  +
Sbjct:  532 SPLASPRGLASLSSLAGLPPPPMGGARQRLGLLGALPPVGGRGLPSLVLPGGLKASSAPGQERKDVERKADEGGDGESATGGTMEAGCLSSRTSTPPSPSSSGKKISVSAAATSSATKEGSVSSVGAPTHAPAGEGDDDRDGENDGSGRFSTAGAVKKQXXXXXXXXXXXXALLGLGXXXXXXXXXXXXXXXXXTLSPPGSPKQHQGQEEEDAGRALLEGLGGKRGGGTATNVTLAAPVGGLDVGGYFGGSD--EEVSEAEIDGEVSSVGEDISFEQES----AESGGDDDFF 818
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4937.12123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KR77_9PHAE6.890e-628.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4937contigH-elongata_contig4937:6906..8543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4937.12123.1mRNA_H-elongata_contig4937.12123.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4937 6755..9670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4937.12123.1 ID=prot_H-elongata_contig4937.12123.1|Name=mRNA_H-elongata_contig4937.12123.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=546bp
MEEEAGRKGDTKRGIDVFEANDPAHETHGQSEAPTKKHMEEQLDTYELKN
HVESPGAIATSSSVSSLKHENSLNVEGRDKSQVQDNIPDHDISVGFSGEH
GEDYKKAWAIGANYARSFATKENDAKQTLDAPDEGGTREAAMHDSQAVVT
VGSATRDALDDNGDVVRNTTPVNRTVIPVTEAEGKSRSNVSNTVEGQDKN
EGEGQETIEEEGQEKIEGEGQEKNGEEGQDKNEEEGQFDAEVVAPRTERC
RDQGDDDATPILPPQPPPSIGLGDGLDALGDGDGEYSPTMPSSFAWSRGS
TQSPLSSSEGLITPSLAGIPLPPVTSARQRVNFIGKLPPVSGDDLVIANQ
DEADKAAALDGKPANTNLPKRATISLYSGQLASETCPVVASPFDSGLLSL
LSTTSTQRCTDDIGCEDSERGTPGEMTRGEFTSGTLLRRRLRLSNEDMSE
MEVRTTPPESPKQHQGQEEENATRRLELEVGDERLSEGVHGGCSDIGERF
PRSDLEHEIDEGTISTGSSIGEHIQFEQESDLDDSRGLGDDVLWP*
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