prot_H-elongata_contig4937.12122.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4937.12122.1
Unique Nameprot_H-elongata_contig4937.12122.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
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BLAST of mRNA_H-elongata_contig4937.12122.1 vs. uniprot
Match: D7FU29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU29_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.960e-15
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 0 
Query:    2 LGVLEVYVEQLSPSTCDVDGVVHALQEAHPRHLGSDVVSMTQLKRLVARLLQNGKPHLPGQY 63
            + ++EV +EQLSP T DV GVV ALQ+ HP HLG D+VS+ QL+RLV RLL  G+ HLPG+Y
Sbjct:   31 IAIVEVQIEQLSPKTFDVSGVVDALQKKHPCHLGPDMVSVNQLERLVWRLLSEGRAHLPGEY 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4937.12122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU29_ECTSI4.960e-1561.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4937contigH-elongata_contig4937:5966..6707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4937.12122.1mRNA_H-elongata_contig4937.12122.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4937 5966..6707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4937.12122.1 ID=prot_H-elongata_contig4937.12122.1|Name=mRNA_H-elongata_contig4937.12122.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
ELGVLEVYVEQLSPSTCDVDGVVHALQEAHPRHLGSDVVSMTQLKRLVAR
LLQNGKPHLPGQYSTSAREKKREAPLEEVRKISADEPLLAKPFILGAEIS
GKNHIGASKLIPAPAPGVYSDFSCRESSSVDGA
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