prot_H-elongata_contig49216.12106.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49216.12106.1
Unique Nameprot_H-elongata_contig49216.12106.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length237
Homology
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: A0A6H5JDR1_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDR1_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 6.270e-69
Identity = 114/229 (49.78%), Postives = 143/229 (62.45%), Query Frame = 0
Query:    2 ITTCAALGCEEPASQRCSICKSVRYCSRECQRQHWTME-HKETCAGMASRRYSELTGLDPFQAHPSVGRSSVGIVTICDSQVQPDTILPHQLPPVA--GGNGWEPCPVPNILGVPIVMKRISPCQCEICAGGRSPVAPWPQPTMQVATRLAIEAHTGLAPRRWMGSGDNHLGIVAVARIDYHDFGVHDWAILDDYICGPVLDSWGMDPPERDVRLAAVCNTRAYADYVA 227
            + TCAA GC E  SQRCS CK+ +YCSRECQR+ W +  HK+ C  +A +R     G    +A    GRS+VGIV+I D QV    +   +LP     G  GWE CPV N+LGVP+ + ++ PC C IC  G S +   P+P  QVATRLAIE H GLAP +W G   NHLG VAVAR+D  DF V DW +LDDYIC  +   WGM+P ER   L  VC+++A+A Y A
Sbjct:    1 MNTCAAPGCMELTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARQR-----GATDSEAALQ-GRSTVGIVSIFDQQVSNSIMSLEELPTAGAPGAQGWELCPVVNMLGVPLAIMKVCPCACHICLRGNSQI---PEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVARMDLRDFTVEDWRVLDDYICNTIFGVWGMEPSERIQLLPRVCSSQAFARYTA 220          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: A0A3M7S325_BRAPC (Ectomycorrhiza-upregulated zf-MYND domain-containing n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7S325_BRAPC)

HSP 1 Score: 63.9 bits (154), Expect = 7.670e-9
Identity = 54/216 (25.00%), Postives = 93/216 (43.06%), Query Frame = 0
Query:   11 EEPASQRCSICKSVRYCSRECQRQHWTMEHKETCAGMASRRYSELTGLDPFQAHPSVGRSSVGIVTICDSQVQPDTILPHQLPPVAGGNGWEPCPVPNILGVPIVMKRISPCQCEICAGGRSPVAPWPQPTMQVATRLAIEAHTGLAPRRW-MGSGDNHLGIVAVARIDYHDFGVHDWAILDDYICGPVLDSWGMDPPERDVRLAAVCNTRAYADY 225
            +E A  RC  CKS+ YCS+ECQ+  W   HK  C   A +  S                    IV +   +V    +   ++ P    NGW PC +  ++G+P+++KR +P                 QP  ++     ++  +GLA   W MG      G++A A+++  DF V  +  L  YI   ++D +G +  + +       N +++ +Y
Sbjct:   17 QENARFRCGNCKSIWYCSKECQKTDWK-NHKPNCNYDAEKLIS--------------------IVVVNGDEVFDQKVPKFEVDPT---NGWIPCVITEMIGIPVMVKRWAPYT--------------KQPHRELGIFYMVDPVSGLAGTEWQMG-----CGVIAFAQMNKTDFPVQLFWDLYSYIY-TLMDYYGDENFDYEKFKKNQLNYKSFREY 188          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: A0A813J335_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J335_POLGL)

HSP 1 Score: 59.7 bits (143), Expect = 4.840e-7
Identity = 34/103 (33.01%), Postives = 52/103 (50.49%), Query Frame = 0
Query:  101 WEPCPVPNILGVPIVMKRISPCQC---EICAGGRSPVAPWPQPTMQVATRLAIEAHTGLAPRRWM-----GSGDNHLGIVAVARIDYHDFGVHDWAILDDYIC 195
            ++P P+P +LGVP++++R+ P      E+    ++  A       +V+  L  + +TG+ P  W      G     L  V VAR D   F   DWA+LDDYIC
Sbjct:   23 FQPAPIPRLLGVPLLVRRLVPTHSAAEEVEMLNKAVAASKAVEVEEVSPWLMADPNTGMPPVEWQDPWQPGGALGPLTEVLVAREDQLPFTAEDWAVLDDYIC 125          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: A0A6J0B4Y6_NEOLC (ankyrin repeat and MYND domain-containing protein 2 n=2 Tax=Diprioninae TaxID=410274 RepID=A0A6J0B4Y6_NEOLC)

HSP 1 Score: 58.9 bits (141), Expect = 1.580e-6
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    2 ITTCAALGCEEPASQRCSICKSVRYCSRECQRQHWTMEHKETCAGMASRRYSELTGLDPFQAHPSV 67
            I  C   G EE A+++CS CK+V+YC RECQR HW M HK++CA +      +LT +D  Q   +V
Sbjct:  334 IQVCVTCG-EEKATKKCSKCKAVQYCDRECQRLHWFM-HKKSCARLGQISSVKLTDIDKAQVANAV 397          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: UPI000626BD24 (ankyrin repeat and MYND domain-containing protein 2 n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI000626BD24)

HSP 1 Score: 57.8 bits (138), Expect = 3.870e-6
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    5 CAALGCEEPASQRCSICKSVRYCSRECQRQHWTMEHKETCAGMASRRYSELTGLDPFQAHPSV 67
            C   G EE A+++CS CK+V+YC RECQR HW M HK++CA +      +LT +D  Q   +V
Sbjct:  337 CVTCG-EEKATKKCSKCKAVQYCDRECQRLHWFM-HKKSCARLGQSSSIKLTDVDRAQVANAV 397          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: A0A4Y9ZBL4_9AGAM (MYND-type domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9ZBL4_9AGAM)

HSP 1 Score: 57.8 bits (138), Expect = 3.920e-6
Identity = 55/181 (30.39%), Postives = 74/181 (40.88%), Query Frame = 0
Query:    5 CAALGCEEPASQRCSICKSVRYCSRECQRQHWTMEHKETCAGMASRRYSELTGLDPFQAHPSVGRSSV--GIVTICDS-QVQPDTILPHQLPPVAG-GNGWEPCPVPNILGVPIVM---KRISPCQCEICAGGRSPVAPWPQPTMQVATRLAIEAHTGLAPRRWMGSGDNHLGIVAVARID 178
            C+ L  +     RCS CKSV YCS+ECQ  HW   HK TC              +P    P  G +    GIV  C+  ++Q     P Q+PP           PV  ++G+PI++    R SP   E  A   +          Q+ T + IE   G A   W      ++G V V R D
Sbjct:   14 CSILPKDSTPFSRCSRCKSVAYCSKECQLAHWKT-HKATCD-------------EPAPVVPPAGPNEPVRGIVVACEGDRMQRSIFTPVQIPPSHDIYQLGSISPVSVLIGMPIIVWRHLRQSPFDIERSAALDN----------QIITYIMIEPDNGFAAPIWQ----ENVGTVTVMRQD 166          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: UPI000E6E5BA5 (ankyrin repeat and MYND domain-containing protein 2-like n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E5BA5)

HSP 1 Score: 57.4 bits (137), Expect = 5.100e-6
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    2 ITTCAALGCEEPASQRCSICKSVRYCSRECQRQHWTMEHKETCAGMASRRYSELT 56
            +TTC   G ++PA ++CS C++V+YC RECQR HW M HK+ CA +A    S  T
Sbjct:  321 VTTCFTCGLQKPA-KKCSKCRAVQYCDRECQRLHWFM-HKKACARLAQMPASNTT 373          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: E9ICU3_SOLIN (MYND-type domain-containing protein (Fragment) n=20 Tax=Formicidae TaxID=36668 RepID=E9ICU3_SOLIN)

HSP 1 Score: 56.6 bits (135), Expect = 9.450e-6
Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   11 EEPASQRCSICKSVRYCSRECQRQHWTMEHKETCA--GMASRRYSELTGLDPFQAHPSVG 68
            E+ A+++CS CK+V+YC RECQR HW M HK+ CA  G +     +LT +D  Q   +VG
Sbjct:  340 EDKATKKCSKCKAVQYCDRECQRLHWFM-HKKACARLGQSPANNGKLTDVDKEQISNAVG 398          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: A0A2K3MVH0_TRIPR (Ubiquitin carboxyl-terminal hydrolase 19-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MVH0_TRIPR)

HSP 1 Score: 56.2 bits (134), Expect = 1.470e-5
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
Query:   10 CEEPASQRCSICKSVRYCSRECQRQHWTMEHKETC--AGMASRRYSELTGLDPFQAHPSVGRSS 71
            C    S++CS CKSVRYCS ECQ+ HW   HKE C   G+ +   +  T    F+A  +VG+SS
Sbjct:   77 CASRGSKQCSRCKSVRYCSTECQQSHWNSGHKEKCKNVGVLNSGQNGTTN-GGFKASAAVGKSS 139          
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Match: A0A2K1LAL7_PHYPA (MYND-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LAL7_PHYPA)

HSP 1 Score: 55.5 bits (132), Expect = 1.520e-5
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 0
Query:   10 CEEPASQRCSICKSVRYCSRECQRQHWTMEHKETC 44
            C++P  +RCS CKS+ YCSRECQ +HW+ EHK  C
Sbjct:  216 CQKPTKRRCSRCKSISYCSRECQVKHWSEEHKFQC 250          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49216.12106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDR1_9PHAE6.270e-6949.78MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A3M7S325_BRAPC7.670e-925.00Ectomycorrhiza-upregulated zf-MYND domain-containi... [more]
A0A813J335_POLGL4.840e-733.01Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A6J0B4Y6_NEOLC1.580e-645.45ankyrin repeat and MYND domain-containing protein ... [more]
UPI000626BD243.870e-646.03ankyrin repeat and MYND domain-containing protein ... [more]
A0A4Y9ZBL4_9AGAM3.920e-630.39MYND-type domain-containing protein n=1 Tax=Dentip... [more]
UPI000E6E5BA55.100e-649.09ankyrin repeat and MYND domain-containing protein ... [more]
E9ICU3_SOLIN9.450e-646.67MYND-type domain-containing protein (Fragment) n=2... [more]
A0A2K3MVH0_TRIPR1.470e-545.31Ubiquitin carboxyl-terminal hydrolase 19-like prot... [more]
A0A2K1LAL7_PHYPA1.520e-560.00MYND-type domain-containing protein n=2 Tax=Physco... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.180coord: 1..49
e-value: 5.7E-13
score: 50.4
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 3..48
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 10..44
e-value: 1.4E-9
score: 37.9
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 5..44
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 5..44
score: 11.559

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49216contigH-elongata_contig49216:551..2689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49216.12106.1mRNA_H-elongata_contig49216.12106.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49216 551..2689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49216.12106.1 ID=prot_H-elongata_contig49216.12106.1|Name=mRNA_H-elongata_contig49216.12106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
MITTCAALGCEEPASQRCSICKSVRYCSRECQRQHWTMEHKETCAGMASR
RYSELTGLDPFQAHPSVGRSSVGIVTICDSQVQPDTILPHQLPPVAGGNG
WEPCPVPNILGVPIVMKRISPCQCEICAGGRSPVAPWPQPTMQVATRLAI
EAHTGLAPRRWMGSGDNHLGIVAVARIDYHDFGVHDWAILDDYICGPVLD
SWGMDPPERDVRLAAVCNTRAYADYVARRRQEATFY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND