prot_H-elongata_contig47621.11899.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig47621.11899.1
Unique Name	prot_H-elongata_contig47621.11899.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	206

Homology

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: D7G621_ECTSI (Histidine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G621_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.430e-104
Identity = 156/177 (88.14%), Postives = 163/177 (92.09%), Query Frame = 0

Query:   30 VEKLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSSSERLKKPLLSL 206
            VEKLDL PPKGTRDVFPE+MRLRNWLFGHWR VA SFGFEEYDAPVLE+E+LY RKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSL LPVKWFS+PQCWRYERMTRGRRREHYQWNMDIWGV GV AEAELLGAMVTFFERVGL AEDVGI+V+S   L + L SL
Sbjct:  136 VEKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVAAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSL 312

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: L1K527_GUITC (Histidine--tRNA ligase n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K527_GUITC)

HSP 1 Score: 301 bits (772), Expect = 9.870e-98
Identity = 148/200 (74.00%), Postives = 168/200 (84.00%), Query Frame = 0

Query:    7 GRASAAVLQDAERRSNAGGSATPVEKLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSSSERLKKPLLSL 206
            GRASAAV Q  E+      S    EKLDL PPKGTRD +PE+MR+RNWLFGHW+ VA   GFEEYDAPVLE+E LY+RK+GEEVTQQLY FEDKG RRVSLRPEMTPSLARMVMA+ KSL LPVKWFS+PQCWRYERMTRGRRREHYQWNMDIWGVPG+EAEAELL A+VTFF+RVG+ ++DVGIKV+S   L + L ++
Sbjct:   57 GRASAAVAQSKEK------STGKKEKLDLKPPKGTRDFYPEDMRMRNWLFGHWKDVARLHGFEEYDAPVLESEELYIRKAGEEVTQQLYNFEDKGERRVSLRPEMTPSLARMVMARGKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVPGIEAEAELLSAIVTFFKRVGITSQDVGIKVNSRAVLSEVLTAM 250

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: A0A7S2KC09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KC09_9STRA)

HSP 1 Score: 291 bits (744), Expect = 3.070e-97
Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = 0

Query:    5 GGGRASAAVLQDAE--RRSNAGGSATPVEKLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGI 191
            GGGR S+AV QD E   +++     T  E+LD NPPKGTRD FPE++R+RNWLF  WR VA +FGF EYD+PVLENE+LY RK+GEEVTQQLY FEDKGGRRVSLRPEMTPSLARMVM+K+  L +P+KWFSLPQCWRYERMTRGRRREHYQWNMD+WGVPG+EAEAELL AMVTFFE VGL + DVGI
Sbjct:   44 GGGRVSSAV-QDKEVLDKTSKSSGKTKRERLDTNPPKGTRDFFPEDLRMRNWLFTEWREVAATFGFSEYDSPVLENESLYTRKAGEEVTQQLYSFEDKGGRRVSLRPEMTPSLARMVMSKKGGLPMPLKWFSLPQCWRYERMTRGRRREHYQWNMDVWGVPGIEAEAELLSAMVTFFENVGLNSRDVGI 231

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: A0A7S2ALP5_9STRA (Histidine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALP5_9STRA)

HSP 1 Score: 286 bits (732), Expect = 9.230e-92
Identity = 138/202 (68.32%), Postives = 166/202 (82.18%), Query Frame = 0

Query:    5 GGGRASAAVLQDAERRSNAGGSATPVEKLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSSSERLKKPLLSL 206
            GGGR SAAV QD  ++ +        EKLDL PP+GTRD +PE+MRL+ WLF HW+ VA   GF EYD+PVLENEALY+RK+GEEV+QQLY FEDKGGR VSLRPEMTPSLARMVMAK+++L++P+KW+S+PQCWRYERMTRGRRREHYQWNMDIWGV G  AEAELLG +V FF+RVGL A+D+G+KV+S + L + L  L
Sbjct:   49 GGGRQSAAVEQDKSKKPSTS------EKLDLAPPRGTRDFYPEDMRLQRWLFSHWQEVARLHGFSEYDSPVLENEALYIRKAGEEVSQQLYNFEDKGGRAVSLRPEMTPSLARMVMAKKRTLSMPLKWYSIPQCWRYERMTRGRRREHYQWNMDIWGVAGPTAEAELLGCIVAFFQRVGLTADDIGVKVNSRQVLSELLNKL 244

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: A0A6V2QQD5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QQD5_9STRA)

HSP 1 Score: 279 bits (713), Expect = 9.320e-92
Identity = 137/192 (71.35%), Postives = 158/192 (82.29%), Query Frame = 0

Query:    5 GGGRASAAVLQ-DAERRSNAGGSATPVEKLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSS 195
            GGGR SA V   +   +++   S    ++LD NPPKGTRD +PE+MRLR WLF HWR VA ++GF EYDAPVLE+EALY RK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+  LNLP+KW S+PQCWRYERMTRGRRREH+QWNMD+WGV GVEAEAELL AMVTFFE VGL ++DVGIKV+S
Sbjct:   54 GGGRVSAGVKDTNILDKTDTSKSMKKQKQLDTNPPKGTRDFYPEDMRLRTWLFDHWRSVASTYGFSEYDAPVLESEALYTRKAGEEVTQQLYNFMDKGDRAVALRPEMTPSLARMVMAKKGGLNLPLKWHSIPQCWRYERMTRGRRREHFQWNMDVWGVQGVEAEAELLSAMVTFFENVGLTSDDVGIKVNS 245

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: F0YFS7_AURAN (Histidine--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFS7_AURAN)

HSP 1 Score: 285 bits (730), Expect = 1.120e-91
Identity = 142/199 (71.36%), Postives = 164/199 (82.41%), Query Frame = 0

Query:    7 GRASAAVLQDAERRSNAGGSATPVEK--LDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSSSERLKKPL 203
            GRASAAV Q  +        ATP  +  LDLNPP+GTRD +PE +R+RNWLFG WR  A + GFEEYD+PVLE+EALYVRK+GEEVTQQLY FEDKGGRRV+LRPEMTPSLARMVMA++ +L LPVKWFS+PQCWRYER TRGRRREHYQWNMDIWGVPGV AEAE+L A+V FFERVG+ + DVGIK++S E L + L
Sbjct:   24 GRASAAVSQKEQA------PATPETQAALDLNPPRGTRDFYPEELRVRNWLFGQWRATAAAHGFEEYDSPVLESEALYVRKAGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMARKNALPLPVKWFSVPQCWRYERTTRGRRREHYQWNMDIWGVPGVTAEAEVLAAVVGFFERVGIDSADVGIKINSREVLAELL 216

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: A0A835Z4P1_9STRA (Histidine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P1_9STRA)

HSP 1 Score: 281 bits (719), Expect = 9.920e-91
Identity = 132/174 (75.86%), Postives = 151/174 (86.78%), Query Frame = 0

Query:   33 LDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSSSERLKKPLLSL 206
            +D NP KGTRD++PE+MRLR WLFGHWR VA  +GFEEYDAPVLE+EALYVRKSGEEVTQQLY FEDKG RRV+LRPEMTPSLARM+MA+R  + LPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGV GVEAEAELL A+V+FF  +G+ + DVG+KV+S   L + + SL
Sbjct:    1 MDANPVKGTRDMYPEDMRLRTWLFGHWRKVAEQYGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGERRVALRPEMTPSLARMIMARRNGVTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVQGVEAEAELLAAVVSFFTNIGITSADVGMKVNSRAALGEIMTSL 174

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: A0A8J2SWN3_9STRA (Histidine--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWN3_9STRA)

HSP 1 Score: 282 bits (722), Expect = 2.360e-90
Identity = 142/192 (73.96%), Postives = 160/192 (83.33%), Query Frame = 0

Query:    4 AGGGRASAAVLQDAERRSNAGGSATPVEKLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSS 195
            AGGGRASAAV Q   R ++        EKLDL PP+GTRDV+PE+MR+RNWLFG WR  A +FGFEEYDAPVLENEALYVRK+GEEVTQQLY FEDKGGRRV+LRPEMTPSLARMVMA++ +   P+KWFS+PQCWRYER TRGRRREHYQWNMDIWGV G  AEAE L AMV+F E VGL ++DVGIKV+S
Sbjct:   32 AGGGRASAAVEQKKARPAS-------TEKLDLAPPRGTRDVYPEDMRVRNWLFGKWRSTAKAFGFEEYDAPVLENEALYVRKAGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMARKPTP--PLKWFSIPQCWRYERTTRGRRREHYQWNMDIWGVDGAAAEAEALAAMVSFMESVGLTSDDVGIKVNS 214

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: W7U324_9STRA (Histidine--tRNA ligase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U324_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.570e-89
Identity = 143/201 (71.14%), Postives = 159/201 (79.10%), Query Frame = 0

Query:    6 GGRASAAVLQDAERRSNAGGSATPVEKLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSSSERLKKPLLSL 206
            G R SAAV QD +             KLDLNPP+GTRD +PE+MR R+WLF  WR VA    FEEYDAPVLE+E L+VRK+GEEVT+QLY FEDKGGRRV+LRPEMTPSLARMVMAKR  L +PVKWFS PQCWRYERMTRGRRREHYQWNMD+WGV GVEAEAELL A+ TFF+RVGL AEDVGIKVSS   L + L +L
Sbjct:   86 GSRGSAAVAQDLKNSRET--QKERQGKLDLNPPRGTRDFYPEDMRTRSWLFELWRQVARDHAFEEYDAPVLESEDLFVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVMPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGVSGVEAEAELLSAITTFFKRVGLTAEDVGIKVSSRGVLAEVLAAL 284

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BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Match: A0A448ZRZ3_9STRA (Histidine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRZ3_9STRA)

HSP 1 Score: 280 bits (715), Expect = 4.470e-89
Identity = 140/192 (72.92%), Postives = 156/192 (81.25%), Query Frame = 0

Query:    6 GGRASAAVLQDAERRSNAGGSATPVE--KLDLNPPKGTRDVFPENMRLRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSS 195
            GGR SA+V QD       GG        KLD NPPKGTRD +PE+MRLRNWLF  WR VA  +GF EYDAPVLE+E+LY RK+GEEVTQQLY FEDKG RRV+LRPEMTPSLARMVMAK+  L LP+KWFS+PQCWRYERMTRGRRREH+QWNMDIWG+ G EA+AELL AMVTFFE VGL +EDVGIKV+S
Sbjct:   59 GGRVSASV-QDKNVXEKTGGKKKKKXQPKLDTNPPKGTRDFYPEDMRLRNWLFDQWRDVAKQYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFEDKGERRVALRPEMTPSLARMVMAKKGGLPLPLKWFSIPQCWRYERMTRGRRREHFQWNMDIWGIAGEEADAELLSAMVTFFESVGLTSEDVGIKVNS 249

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot

BLAST of mRNA_H-elongata_contig47621.11899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G621_ECTSI	1.430e-104	88.14	Histidine--tRNA ligase n=1 Tax=Ectocarpus siliculo...	[more]
L1K527_GUITC	9.870e-98	74.00	Histidine--tRNA ligase n=2 Tax=Guillardia theta (s...	[more]
A0A7S2KC09_9STRA	3.070e-97	74.60	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
A0A7S2ALP5_9STRA	9.230e-92	68.32	Histidine--tRNA ligase n=1 Tax=Dictyocha speculum ...	[more]
A0A6V2QQD5_9STRA	9.320e-92	71.35	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
F0YFS7_AURAN	1.120e-91	71.36	Histidine--tRNA ligase n=1 Tax=Aureococcus anophag...	[more]
A0A835Z4P1_9STRA	9.920e-91	75.86	Histidine--tRNA ligase n=1 Tax=Tribonema minus Tax...	[more]
A0A8J2SWN3_9STRA	2.360e-90	73.96	Histidine--tRNA ligase n=1 Tax=Pelagomonas calceol...	[more]
W7U324_9STRA	1.570e-89	71.14	Histidine--tRNA ligase n=2 Tax=Nannochloropsis gad...	[more]
A0A448ZRZ3_9STRA	4.470e-89	72.92	Histidine--tRNA ligase n=1 Tax=Pseudo-nitzschia mu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.930.10		coord: 32..205 e-value: 1.0E-56 score: 194.2
None	No IPR available	PANTHER	PTHR43707:SF1	HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED	coord: 28..199
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 36..195
IPR041715	Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain	PFAM	PF13393	tRNA-synt_His	coord: 40..194 e-value: 2.7E-20 score: 72.9
IPR004516	Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit	PANTHER	PTHR43707	FAMILY NOT NAMED	coord: 28..199
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 40..171 score: 9.616

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig47621	contig	H-elongata_contig47621:1332..3753 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig47621.11899.1	mRNA_H-elongata_contig47621.11899.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig47621 1332..3753 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig47621.11899.1 ID=prot_H-elongata_contig47621.11899.1|Name=mRNA_H-elongata_contig47621.11899.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
AGGAGGGRASAAVLQDAERRSNAGGSATPVEKLDLNPPKGTRDVFPENMR
LRNWLFGHWRHVALSFGFEEYDAPVLENEALYVRKSGEEVTQQLYCFEDK
GGRRVSLRPEMTPSLARMVMAKRKSLNLPVKWFSLPQCWRYERMTRGRRR
EHYQWNMDIWGVPGVEAEAELLGAMVTFFERVGLGAEDVGIKVSSSERLK
KPLLSL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041715	HisRS-like_core
IPR004516	HisRS/HisZ
IPR006195	aa-tRNA-synth_II