prot_H-elongata_contig47591.11894.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47591.11894.1
Unique Nameprot_H-elongata_contig47591.11894.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length302
Homology
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR)

HSP 1 Score: 187 bits (476), Expect = 1.580e-51
Identity = 107/314 (34.08%), Postives = 174/314 (55.41%), Query Frame = 0
Query:    1 MDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKAS-IVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            +       VW + E   G + +G + V+K K+D +G IE+YK  LVAK + Q + I Y+E+ SP S   S+R+V++++A    E  Q+DV  A L  D+ E+++++ PE +    K+  V  L K++YG+          +   ++   F ++Q D C++  I  G   V +V+YVDD+L+ S       ++ R L + F +KDLGEA Y +   I R+R+ GTL   Q  YI+ + +RF + + S  V P   G        P+++AE+D+MR IPY  +VG+L++A   TRPDI++    L ++  NPG  H
Sbjct:  133 LKSMKTNNVWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDH 445          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A396GW39_MEDTR (Putative RNA-directed DNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GW39_MEDTR)

HSP 1 Score: 191 bits (484), Expect = 5.080e-51
Identity = 107/311 (34.41%), Postives = 177/311 (56.91%), Query Frame = 0
Query:    1 MDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSR--KQVGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKASI-VLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPG 298
            MD      VW +++  +G   +G + VFK+KID DG++  YK  LVAK F+Q+  + Y+E+ SP +   SIR++L++ A   +E  Q+DV  A L  ++ E++Y+  PE + D +  K+V  L++++YG+          +   ++  GF +++ +PCV++ +  G +V  +++YVDD+L+        ++    L  CF +KDLGEA Y L   I RDR+   L   Q  YI  V  RF + ++    +P + G  LSK+ SP TD E D MR IPY   +G++++A   TRPD+S+     +++  NPG
Sbjct:  790 MDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVYKKV-SGSIVSFLILYVDDILLIGNDIPTLQEIKTWLGKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGTYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSYALSATSRYQSNPG 1099          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A5N6PN55_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PN55_9ASTR)

HSP 1 Score: 182 bits (461), Expect = 5.580e-51
Identity = 102/306 (33.33%), Postives = 173/306 (56.54%), Query Frame = 0
Query:    9 VWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKAS-IVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            VW ++E  +G + +  + V+K K+D +G IE+YK  LVAK + Q + I Y+E+ SP S   S+R+V++++A    E  Q+DV  A L  D+ E+++++ PE +    K+  V  L K++ G+          +   ++   F ++Q D C++   + G   V +V+YV+D+L+ S        + R L + F +KDLGEA Y +   I R+R+ GTL   Q  YI+ + +RF + + S  + P   G +      P+++AE+D+MR IPY  +VG+L++A   TRPDI++    L ++  NPG  H
Sbjct:    6 VWTLIELPRGAKAVSCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKYSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSICGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLK-MSGSKFVILVLYVNDILLASNNLGMLYDSKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSIAPVVKGDSFGSFQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDH 310          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM)

HSP 1 Score: 189 bits (481), Expect = 1.290e-50
Identity = 109/307 (35.50%), Postives = 173/307 (56.35%), Query Frame = 0
Query:    8 GVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYG-----------VYGIELEAKGFQRSQADPCVF-RWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            G W +V R  G R +G R VF +K ++ GR+ +YK  LVAK F+Q   + + E+ SP +   SIR+VLS++ A  +   QLD + A L +D++E++++E+P    ++   +  L KA+YG           ++ + ++  GF    AD CV+ +      V V +  YVDD+++ + T ++ ++    L S F +K+LGE  + L   I  DR A TL   Q +YI  V  RF    A ++V P   G  L+K  SP T+AE ++MR  PYR ++G LL+  T TRPD+++   QL++F +NPG  H
Sbjct:  867 GSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKI-GFHSCGADQCVYVKGTKDNYVYVCL--YVDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMKLTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQH 1170          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A401H1G1_9APHY (Integrase catalytic domain-containing protein n=7 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1G1_9APHY)

HSP 1 Score: 189 bits (480), Expect = 1.770e-50
Identity = 112/308 (36.36%), Postives = 171/308 (55.52%), Query Frame = 0
Query:    6 ARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ-VGLLKKAMYGV-YGIE---------LEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            A   W +V    GKR +G+  VFK K + DG +E+YK  LVAK + Q     Y E  +PT    ++R++L++ AA   E   +D++ A L  D+EEEIY++ PE +     + V  L K++YG+  G           L   GF R Q+D  ++ +I   + ++ + V++DD+ + S +K+  +  V++L S F ++DLG   + L   I RDR   T+   Q QYI  + ER+G++   S+  P   G  LSK+ +PQT  E + M ++PY   VGAL++ A  TRPDI F    LA+FN NPGP H
Sbjct:  912 ANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYIREDVRII-VPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMNPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNANPGPAH 1218          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A401GR04_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GR04_9APHY)

HSP 1 Score: 188 bits (478), Expect = 2.950e-50
Identity = 113/308 (36.69%), Postives = 170/308 (55.19%), Query Frame = 0
Query:    6 ARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ-VGLLKKAMYGV-YGIE---------LEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            A   W +V    GKR +G+  VFK K + DG +E+YK  LVAK + Q     Y E  +PT    ++R++L++ AA   E   +D++ A L  D+EEEIY++ PE +     + V  L K++YG+  G           L   GF R Q+D  ++ +I  G V + + V++DD+ + S +K+  +  V++L S F ++DLG   + L   I RD    T+   Q QYI  + ER+G++   S+  P   G  LSK+ +PQT  E + M ++PY   VGAL++ A  TRPDI F    LA+FN NPGP H
Sbjct:  772 ANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYI-RGDVHIIVPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDHAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMDPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNANPGPAH 1078          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A151STE9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151STE9_CAJCA)

HSP 1 Score: 182 bits (463), Expect = 3.770e-50
Identity = 108/306 (35.29%), Postives = 168/306 (54.90%), Query Frame = 0
Query:    9 VWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKASIV-LPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            VW +VE  +G + +G + VFK K D DG +E+YK  LVAK F +   I Y+E+ SP S   S R++++++A    E  Q+DV  A L  ++EE +Y++ P  +    K+  V  LKK++YG+          +   + + GF+ +  D C++  +  G  V+ +++YVDD+L+ +       +  + L S F +KD+GEA Y +   I RDR+ G L   Q  YI  V ERF + K S   +P   G   S +  P+ D E  +M  IPY  +VG++++A   TRPDISF A  L ++  NPG  H
Sbjct:  215 VWDLVELPEGCKRVGCKWVFKTKRDSDGNLERYKARLVAKGFTKKDGIDYKETFSPVSRKDSFRIIMALVAHYDLELHQMDVKTAFLNGNLEENVYMDQPMGFSVEGKEHMVCKLKKSIYGLKQASRQWYLKFNDTIVSFGFKENIVDRCIYLKV-SGSKVIFLILYVDDILLATNDLGLLHETKKFLSSNFEMKDMGEASYVIGIEIFRDRSQGLLGLSQKAYINKVLERFRMEKCSASPVPIQKGDKFSLTQCPKNDLERKQMEAIPYASVVGSIMYAQICTRPDISFAAEMLGRYQSNPGMKH 519          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A2N9IT45_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IT45_FAGSY)

HSP 1 Score: 185 bits (470), Expect = 3.900e-50
Identity = 108/310 (34.84%), Postives = 173/310 (55.81%), Query Frame = 0
Query:    2 DGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAY--RDSRKQVGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPG 298
            D     GVW++V+R +G +V+G + +FKRK D  G++EK+K  LVAK + Q   + +EE+ SP     SIR +LS++A   +E  Q+DV  A L  D+EE++Y+E PE +  +    +V  L+K++YG+          +   +   GF ++ ++PCV+   +H  VV+ + +YVDD+L+        ++  + L   F +KDLGEA Y L   I RDR    L   Q  YI T+ E+F +    S  +P    ++LS+ D P+ D E  + +  PY   VG+L++    TRPDI+F    +++F  NPG
Sbjct:  355 DSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSIRAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKVVI-LTLYVDDILLAGNDVDMLDEVKQWLFKTFEMKDLGEASYILGIKIERDRVNRKLSLSQENYIDTLLEKFHMVDCLSGRIPYNNLRSLSQKDCPKNDQETLDPKLYPYASAVGSLMYLMICTRPDIAFAVGMVSRFQSNPG 663          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A5N6MC51_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MC51_9ASTR)

HSP 1 Score: 187 bits (476), Expect = 4.730e-50
Identity = 107/314 (34.08%), Postives = 174/314 (55.41%), Query Frame = 0
Query:    1 MDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKAS-IVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            +       VW + E   G + +G + V+K K+D +G IE+YK  LVAK + Q + I Y+E+ SP S   S+R+V++++A    E  Q+DV  A L  D+ E+++++ PE +    K+  V  L K++YG+          +   ++   F ++Q D C++  I  G   V +V+YVDD+L+ S       ++ R L + F +KDLGEA Y +   I R+R+ GTL   Q  YI+ + +RF + + S  V P   G        P+++AE+D+MR IPY  +VG+L++A   TRPDI++    L ++  NPG  H
Sbjct:  216 LKSMKTNNVWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDH 528          
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Match: A0A2N9I256_FAGSY (Uncharacterized protein n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I256_FAGSY)

HSP 1 Score: 187 bits (476), Expect = 5.020e-50
Identity = 109/313 (34.82%), Postives = 174/313 (55.59%), Query Frame = 0
Query:    2 DGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDFRQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVEEEIYVELPEAY--RDSRKQVGLLKKAMYGV----------YGIELEAKGFQRSQADPCVFRWILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYLLCHITRDRNAGTLKFDQHQYIQTVAERFGVTKA-SIVLPTAGGKALSKSDSPQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPTH 301
            D     GVW++V+R +G +V+G + +FKRK D  G++EK+K  LVAK + Q   + +EE+ SP     SIR +LS++A   +E  Q+DV  A L  D+EE++Y+E PE +  +    +V  L+K++YG+          +   +   GF ++ ++PCV+   +H  VV+ + +YVDD+L+        ++  + L   F +KDLGEA Y L   I RDR    L   Q  YI T+ E+F +    S  +P    ++LS+ D P+ D E  + +  PY   VG+L++    TRPDI+F    +++F  NPG  H
Sbjct:  531 DSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSIRAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKVVI-LTLYVDDILLAGNDVDMLDEVKQWLFKTFEMKDLGEASYILGIKIERDRVNRKLSLSQENYIDTLLEKFHMVDCLSGRIPYNNLRSLSQKDCPKNDQETLDPKLYPYASAVGSLMYLMICTRPDIAFAVGMVSRFQSNPGKMH 842          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47591.11894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N6M1Y8_9ASTR1.580e-5134.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A396GW39_MEDTR5.080e-5134.41Putative RNA-directed DNA polymerase n=2 Tax=Medic... [more]
A0A5N6PN55_9ASTR5.580e-5133.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H572_PHYRM1.290e-5035.50Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A401H1G1_9APHY1.770e-5036.36Integrase catalytic domain-containing protein n=7 ... [more]
A0A401GR04_9APHY2.950e-5036.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A151STE9_CAJCA3.770e-5035.29Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9IT45_FAGSY3.900e-5034.84Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A5N6MC51_9ASTR4.730e-5034.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9I256_FAGSY5.020e-5034.82Uncharacterized protein n=4 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..234
e-value: 4.5E-36
score: 124.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..127
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 10..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47591contigH-elongata_contig47591:897..1832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47591.11894.1mRNA_H-elongata_contig47591.11894.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47591 471..1913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47591.11894.1 ID=prot_H-elongata_contig47591.11894.1|Name=mRNA_H-elongata_contig47591.11894.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=302bp
MDGQTARGVWQVVERLKGKRVLGTRVVFKRKIDKDGRIEKYKCHLVAKDF
RQVKSIHYEESSSPTSAPTSIRMVLSMIAALGWEARQLDVNMACLEADVE
EEIYVELPEAYRDSRKQVGLLKKAMYGVYGIELEAKGFQRSQADPCVFRW
ILHGIVVVAIVVYVDDLLVTSATKRDEEQAVRDLCSCFPIKDLGEAPYYL
LCHITRDRNAGTLKFDQHQYIQTVAERFGVTKASIVLPTAGGKALSKSDS
PQTDAEVDEMRQIPYREIVGALLWAATMTRPDISFTARQLAKFNDNPGPT
H*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like