prot_H-elongata_contig47535.11882.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47535.11882.1
Unique Nameprot_H-elongata_contig47535.11882.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length169
Homology
BLAST of mRNA_H-elongata_contig47535.11882.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.370e-13
Identity = 68/201 (33.83%), Postives = 99/201 (49.25%), Query Frame = 0
Query:    1 MRKADAPEVKLARLRS-------FKSNSLPH--GTISNVLKQLERTIEENGL----PRNLSIESDETIDH----------------HEAIMRASLVRCATKLIGKGHPRRSTVAVSDPASQRNMRDKFKINGAPT--LQEPSLDTSEGLEKSNEPSRVSRDTTQGMDGSEVMLSNIEEEPLPWG--DRAVIAASIDLKRLQ 168
            MRKADAP ++LA  RS         S+S+ H   T+ +  KQ +  +++ G     P     + D ++D                  EA+M+ASL+RCA+ LI KG  RR+T+ VSDPA+Q+ +RD     GAP    + PS         S E +  +  T   +DG + M   +EEEP PWG  +  V AA+   K +Q
Sbjct:  515 MRKADAPGLRLATYRSASMPHLNVNSSSIRHLERTVQDARKQKQAALQQFGTNGPTPEESIDDMDTSLDEXXXXXXXXXXXXXYNRREAVMQASLLRCASDLIEKGPFRRATLEVSDPAAQKALRDAAVYGGAPPPPSRGPSGPDPLARRLSEETAGSAGATQMAVDGWKSMPPQVEEEPHPWGRGEHMVTAATAVQKLVQ 715          
BLAST of mRNA_H-elongata_contig47535.11882.1 vs. uniprot
Match: A0A6H5JLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX9_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.580e-9
Identity = 48/117 (41.03%), Postives = 66/117 (56.41%), Query Frame = 0
Query:   56 DHHEAIMRASLVRCATKLIGKGHPRRSTVAVSDPASQRNMRDKFKINGAP--TLQEPSLDTSEGLEKSNEPSRVSRDTTQGMDGSEVMLSNIEEEPLPWG--DRAVIAASIDLKRLQ 168
            +  EA+MRASL+RCA+ LI  G  RR+T+ +SDPA+++ +RD     GAP  T Q PS         S E +  +  T + +DG + M    EEEP PWG  D  V AA+   K +Q
Sbjct:  227 NRREAVMRASLLRCASDLIQTGPFRRATLEISDPAAKKALRDAAAC-GAPHLTAQGPSGPDPLAWRPSEETAGSAGATQRVVDGWKSMPPQEEEEPHPWGSGDHMVTAATAVQKLMQ 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47535.11882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG93_ECTSI1.370e-1333.83Calcium-dependent protein kinase 2 (PfCDPK2) n=1 T... [more]
A0A6H5JLX9_9PHAE2.580e-941.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47535contigH-elongata_contig47535:1476..2342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47535.11882.1mRNA_H-elongata_contig47535.11882.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47535 657..4280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47535.11882.1 ID=prot_H-elongata_contig47535.11882.1|Name=mRNA_H-elongata_contig47535.11882.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
MRKADAPEVKLARLRSFKSNSLPHGTISNVLKQLERTIEENGLPRNLSIE
SDETIDHHEAIMRASLVRCATKLIGKGHPRRSTVAVSDPASQRNMRDKFK
INGAPTLQEPSLDTSEGLEKSNEPSRVSRDTTQGMDGSEVMLSNIEEEPL
PWGDRAVIAASIDLKRLQ*
back to top