prot_H-elongata_contig47234.11831.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47234.11831.1
Unique Nameprot_H-elongata_contig47234.11831.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
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BLAST of mRNA_H-elongata_contig47234.11831.1 vs. uniprot
Match: D8LQC5_ECTSI (Similar to oral cancer overexpressed 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC5_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.140e-22
Identity = 46/58 (79.31%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:    1 MRAVVALAESIPRINTKDEVALVTVQRVRARFRAVTSMVGLPLVFDAKGQAEAKDFSF 58
            MRAVV LAES+PR+NT++  A  T QRVRARFRAVTSMVGLP+VFD+KGQAEAKDFSF
Sbjct:   79 MRAVVTLAESVPRVNTQEATAAQTAQRVRARFRAVTSMVGLPVVFDSKGQAEAKDFSF 136
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47234.11831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQC5_ECTSI1.140e-2279.31Similar to oral cancer overexpressed 1 n=2 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47234contigH-elongata_contig47234:1640..2427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47234.11831.1mRNA_H-elongata_contig47234.11831.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47234 1602..3530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47234.11831.1 ID=prot_H-elongata_contig47234.11831.1|Name=mRNA_H-elongata_contig47234.11831.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MRAVVALAESIPRINTKDEVALVTVQRVRARFRAVTSMVGLPLVFDAKGQ
AEAKDFSF*
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