prot_H-elongata_contig47100.11812.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47100.11812.1
Unique Nameprot_H-elongata_contig47100.11812.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
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BLAST of mRNA_H-elongata_contig47100.11812.1 vs. uniprot
Match: D7FTJ7_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ7_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 2.470e-44
Identity = 84/121 (69.42%), Postives = 99/121 (81.82%), Query Frame = 0 
Query:    1 VRYSQLEAVKKQPMNEAVFVHLERGELTGTAGMDPVPDICDGVKEHLASATQKLDRALGKLAILTMSRGSSSKTGQERWPREERDSRGGWAREGISDTASALFAEVKAIYGRAKKTKPGLG 121
            VR SQLE+VK+QPM+EAVFVHL+RGELTG+ GMDPVPDICDGVKEHLASATQKLDRALGKLA+LT      +K G +R PR+ER    G  ++GI+DTAS LFAEVKAI+ +AKK +P  G
Sbjct:  225 VRTSQLESVKRQPMSEAVFVHLDRGELTGSTGMDPVPDICDGVKEHLASATQKLDRALGKLALLTR----GNKDGGDRGPRDERVGSKGMTKDGINDTASTLFAEVKAIFSKAKKQRPAGG 341
[Close]
BLAST of mRNA_H-elongata_contig47100.11812.1 vs. uniprot
Match: A0A6H5K5D8_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D8_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 2.370e-43
Identity = 83/121 (68.60%), Postives = 98/121 (80.99%), Query Frame = 0 
Query:    1 VRYSQLEAVKKQPMNEAVFVHLERGELTGTAGMDPVPDICDGVKEHLASATQKLDRALGKLAILTMSRGSSSKTGQERWPREERDSRGGWAREGISDTASALFAEVKAIYGRAKKTKPGLG 121
            VR SQLE+VK+QPM+EAVFVHL+RGELTG+ GM PVPDICDGVKEHLASATQKLDRALGKLA+LT      +K G +R PR+ER    G  ++GI+DTAS LFAEVKAI+ +AKK +P  G
Sbjct:  327 VRTSQLESVKRQPMSEAVFVHLDRGELTGSTGMAPVPDICDGVKEHLASATQKLDRALGKLALLTR---GGNKDGGDRGPRDERVGSKGMTKDGINDTASTLFAEVKAIFSKAKKQRPAGG 444
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47100.11812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTJ7_ECTSI2.470e-4469.42UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K5D8_9PHAE2.370e-4368.60UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47100contigH-elongata_contig47100:459..2928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47100.11812.1mRNA_H-elongata_contig47100.11812.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47100 459..2928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47100.11812.1 ID=prot_H-elongata_contig47100.11812.1|Name=mRNA_H-elongata_contig47100.11812.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
VRYSQLEAVKKQPMNEAVFVHLERGELTGTAGMDPVPDICDGVKEHLASA
TQKLDRALGKLAILTMSRGSSSKTGQERWPREERDSRGGWAREGISDTAS
ALFAEVKAIYGRAKKTKPGLG*
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