prot_H-elongata_contig4707.11806.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5JY05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY05_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 5.430e-12 Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 70 VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
VY K D G VKAK LVA+GFKQ+ G+ + ETF+PT +++ +RLL A+AC+Y L+L
Sbjct: 61 VYNWKADETGKMVKAKPGLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKYNLEL 119
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.740e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0
Query: 55 GTLDIVHRLTPRCGR-----VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
GT + ++ C V+ K D G VKAK+RLVA+GFKQ+ G+ + ETF+PT +++ +RL+ A+AC+Y L+L
Sbjct: 243 GTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLEL 321
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.790e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0
Query: 55 GTLDIVHRLTPRCGR-----VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
GT + ++ C V+ K D G VKAK+RLVA+GFKQ+ G+ + ETF+PT +++ +RL+ A+AC+Y L+L
Sbjct: 176 GTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLEL 254
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.800e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0
Query: 55 GTLDIVHRLTPRCGR-----VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
GT + ++ C V+ K D G VKAK+RLVA+GFKQ+ G+ + ETF+PT +++ +RL+ A+AC+Y L+L
Sbjct: 448 GTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLEL 526
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.820e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0
Query: 55 GTLDIVHRLTPRCGR-----VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
GT + ++ C V+ K D G VKAK+RLVA+GFKQ+ G+ + ETF+PT +++ +RL+ A+AC+Y L+L
Sbjct: 512 GTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLEL 590
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.820e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0
Query: 55 GTLDIVHRLTPRCGR-----VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
GT + ++ C V+ K D G VKAK+RLVA+GFKQ+ G+ + ETF+PT +++ +RL+ A+AC+Y L+L
Sbjct: 656 GTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLEL 734
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.870e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0
Query: 55 GTLDIVHRLTPRCGR-----VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
GT + ++ C V+ K D G VKAK+RLVA+GFKQ+ G+ + ETF+PT +++ +RL+ A+AC+Y L+L
Sbjct: 862 GTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLEL 940
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5JKR2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKR2_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 3.360e-11 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 0
Query: 70 VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
VY + D G VKAK+RLVA+GFKQ+ G+ + ETF+PT +++ +RLL A+AC+Y L+L
Sbjct: 229 VYKWEADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKYNLEL 287
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5KM90_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM90_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 3.520e-11 Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query: 70 VYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
VY+ K D G+ V+AK+RLVARGF QREG+ F ETF+P S + +RLL+AIAC DL
Sbjct: 168 VYSRKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDL 226
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Match: A0A6H5JA99_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA99_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 5.180e-11 Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 21 EEADATILAAPSRRSGQRTEPSGGHAVDRSERPEGTLDIVHRLTPRCGRVYTSKVDGQGWGVKAKSRLVARGFKQREGIYFCETFAPTVSSSCVRLLSAIACEYGLDL 128
++ D+ + P + P + E E +D V + ++ KVD G+ KAK+RLVARG Q+E I F +++APTV+SS VR+L+A+ACE L+L
Sbjct: 609 DDLDSAVREXPRCHAKDLRVPQTFKDAKQCEHSEQFMDAVKHNYIKSKLIFDWKVDAFGFPTKAKARLVARGDMQKECIDFGDSYAPTVTSSSVRMLAALACELDLEL 716 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4707.11806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig4707.11806.1 ID=prot_H-elongata_contig4707.11806.1|Name=mRNA_H-elongata_contig4707.11806.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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