prot_H-elongata_contig46790.11781.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46790.11781.1
Unique Nameprot_H-elongata_contig46790.11781.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
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BLAST of mRNA_H-elongata_contig46790.11781.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.280e-24
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0 
Query:    1 KIRGLGLGQIAMAPGGWIRADGSGHAVAFVVMRKAEDKFSVSIINPCGEGAEYHAKEADPSRGKVR 66
            KIRGLG+G + MAP GW+RADG+GH+V FVVMR+  + FSVSI+NP GEG EYHA+EADP+RGK+R
Sbjct:  488 KIRGLGVGDLGMAPCGWVRADGTGHSVIFVVMRRDAEVFSVSIVNPYGEGTEYHAQEADPTRGKMR 553
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BLAST of mRNA_H-elongata_contig46790.11781.1 vs. uniprot
Match: A0A6H5KSR5_9PHAE (SH3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR5_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.500e-24
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 0 
Query:    1 KIRGLGLGQIAMAPGGWIRADGSGHAVAFVVMRKAEDKFSVSIINPCGEGAEYHAKEADPSRGKV 65
            KIRGLG+G + MAP GW+RADG+GH+V FVVMR+  + FSVSI+NP GEG EYHA+EADP+RGKV
Sbjct:  334 KIRGLGVGDLGMAPCGWVRADGTGHSVIFVVMRRDAEVFSVSIVNPHGEGTEYHAQEADPTRGKV 398
[Close]
BLAST of mRNA_H-elongata_contig46790.11781.1 vs. uniprot
Match: A0A835Z7Z7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.430e-12
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:    1 KIRGLGLGQIAMAPGGWIRADGSGHAVAFVVMRK----------------AEDKFSVSIINPCGEGAEYHAKEADPSRGKVR 66
            K++ +  G+ AMAPGGW+R DG+GH + F+V ++                + D +S++++NP GEGA YHA   DP+ G V+
Sbjct: 1060 KVKQMRAGEFAMAPGGWMREDGTGHLLVFLVRKEVPGASTLSADSMRTDVSADSYSLTVVNPSGEGAGYHAVRPDPANGNVQ 1141
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46790.11781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRI4_ECTSI1.280e-2469.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KSR5_9PHAE2.500e-2470.77SH3 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z7Z7_9STRA1.430e-1237.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46790contigH-elongata_contig46790:3284..3487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46790.11781.1mRNA_H-elongata_contig46790.11781.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46790 3284..3487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46790.11781.1 ID=prot_H-elongata_contig46790.11781.1|Name=mRNA_H-elongata_contig46790.11781.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
KIRGLGLGQIAMAPGGWIRADGSGHAVAFVVMRKAEDKFSVSIINPCGEG
AEYHAKEADPSRGKVRV*
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