prot_H-elongata_contig46561.11753.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46561.11753.1
Unique Nameprot_H-elongata_contig46561.11753.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
BLAST of mRNA_H-elongata_contig46561.11753.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.270e-29
Identity = 69/152 (45.39%), Postives = 87/152 (57.24%), Query Frame = 0
Query:    3 CMLPLEDPCTPGTSSSNINTGIGLFYSLACNSTDAESDSVPGCNTDPTNLCRDCFFNTTLYQVKNPGEELPDYVDCPCCVLEEYRKDSAVNEDGPLCENFTPTP-------VRAGDAFYTKPFD---FRDAQRKYGGGEGIALAALVLLRGL 144
            C+LP   PCT  TS SN N GIG +Y  AC   + E + + GCN D ++LCR CFFNT LY  K+P E+LPDY DCPCCVL+ Y +D A N DG  C + +P P       +  G+    + FD   F D   +   GE  AL+AL LL  L
Sbjct:  412 CILPESKPCTEATSFSNTNEGIGDYYDPACELVEGE-EQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDIYEQD-AFNLDGQRCVSASPAPSSPALTEIPVGE-ITPRGFDDLSFDDGGWEMNAGEVAALSALGLLAAL 560          
BLAST of mRNA_H-elongata_contig46561.11753.1 vs. uniprot
Match: A0A6H5J9W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W9_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 5.110e-27
Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    2 ECMLPLEDPCTPGTSS-SNINTGIGLFYSLACNS---TDAESDSVP-GCNTDPTNLCRDCFFNTTLYQVKNPGEELPDYVDCPCCVLEEYRKDSAVNEDGPLCENFTPTPV 107
            ECM+P   PCT   S+ S+ N G+G FY   C +   T +E   +P GC+    + CR C FNT  +Q KNPGE+LPD VDCPCCVL+ Y++D+A+NEDG  CE  TP PV
Sbjct:  538 ECMIPEGAPCTSTASTFSHTNQGVGSFYDPTCAAAAATASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVLDIYKEDTAINEDGVRCEWMTPAPV 648          
BLAST of mRNA_H-elongata_contig46561.11753.1 vs. uniprot
Match: D8LE44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE44_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.290e-22
Identity = 46/100 (46.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:    2 ECMLPLEDPCTPGTSS-SNINTGIGLFYSLACNS---TDAESDSVP-GCNTDPTNLCRDCFFNTTLYQVKNPGEELPDYVDCPCCVLEEYRKDSAVNEDG 96
            ECM+P E PCT   ++ ++ N G+G +Y   C +   T +E   +P GC+    + CR C FNT  +Q KNPGE+LPD VDCPCCV++ Y++D+A++EDG
Sbjct:  216 ECMIPEEAPCTSTAATIAHTNQGVGSYYDPTCAAAAATASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVVDVYKEDTAISEDG 315          
BLAST of mRNA_H-elongata_contig46561.11753.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 5.200e-21
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 0
Query:    3 CMLPLEDPCTPGTSSSNINTGIGLFYSLACNSTDAESDSVPGCNTDPTNLCRDCFFNTTLYQVKNPGE-ELPDYVDCPCCVLEEYRKDSAVNEDGPLCENFTPTPVRAGDAFYTKPFDFRDAQRKYGGGEGIALAALVL 140
            C  PL+ PCT  T  S+IN G+G +Y   C        S  GC    + LCR C+FN T+ +  N  + ++PDY +CPCCV++EY + +        C   TP+P +       + + F D      GGEG A+AAL L
Sbjct:  469 CTWPLDGPCTTETLFSDINRGLGAYYDPGC--------SGAGCGVGDSGLCRTCYFNLTMGEEGNDDDVDMPDYPECPCCVMDEYDRSAD------RCVGATPSPAQGTGTEALETYSFEDKPLDMSGGEGFAVAALAL 593          
BLAST of mRNA_H-elongata_contig46561.11753.1 vs. uniprot
Match: D8LE45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE45_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 3.540e-9
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
Query:   56 CFFNTTLYQVKNPGEELPDYVDCPCCVLEEYRKDS 90
            CFFNT LY  K+P E+LPDY DCPCCVL+ Y +D+
Sbjct:    2 CFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDA 36          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46561.11753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5J9X3_9PHAE4.270e-2945.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9W9_9PHAE5.110e-2750.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE44_ECTSI1.290e-2246.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBT9_9PHAE5.200e-2135.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE45_ECTSI3.540e-965.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46561contigH-elongata_contig46561:1514..4218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46561.11753.1mRNA_H-elongata_contig46561.11753.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46561 247..4224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46561.11753.1 ID=prot_H-elongata_contig46561.11753.1|Name=mRNA_H-elongata_contig46561.11753.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
MECMLPLEDPCTPGTSSSNINTGIGLFYSLACNSTDAESDSVPGCNTDPT
NLCRDCFFNTTLYQVKNPGEELPDYVDCPCCVLEEYRKDSAVNEDGPLCE
NFTPTPVRAGDAFYTKPFDFRDAQRKYGGGEGIALAALVLLRGLFRSLFG
TGANDNMLKIFEVRFVLDVVVALACVYPEARRVILEKTRILRCFAL*
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