prot_H-elongata_contig20562.5867.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20562.5867.1
Unique Nameprot_H-elongata_contig20562.5867.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: UPI001EE61CA4 (bromodomain and WD repeat-containing protein 3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE61CA4)

HSP 1 Score: 82.0 bits (201), Expect = 4.080e-16
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TGQ+I TGADDH++K      IWS S+GR++ + RGH++ ITDLAV+ + T L   S D+  RV   RT   + VL+GH   +  V F P
Sbjct:  188 VYCVSFDRTGQYIFTGADDHLVK------IWSASAGRLLATFRGHAAEITDLAVNFENTLLACGSCDKIIRVWCLRTKAPVIVLQGHTGMITSVQFCP 279
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: UPI001EB08AF9 (bromodomain and WD repeat-containing protein 3-like n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB08AF9)

HSP 1 Score: 82.0 bits (201), Expect = 4.180e-16
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TGQ+I TGADDH++K      IWS S+GR++ + RGH++ ITDLAV+ + T L   S D+  RV   RT   + VL+GH   +  V F P
Sbjct:  188 VYCVSFDRTGQYIFTGADDHLVK------IWSASAGRLLATFRGHAAEITDLAVNFENTLLACGSCDKFIRVWCLRTKAPVIVLQGHTGMITSVQFCP 279
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: B4JFX1_DROGR (GH18810 n=1 Tax=Drosophila grimshawi TaxID=7222 RepID=B4JFX1_DROGR)

HSP 1 Score: 81.6 bits (200), Expect = 5.730e-16
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TG++I+TGADD +IK      IWS + GR++ +LRG S+ ITD+A++ D T L + S DR  RV D +T   +AVL GH   +  V F P
Sbjct:  186 VYCVLFDRTGRYIITGADDLLIK------IWSAADGRLLATLRGASAEITDMAINLDNTMLAAGSVDRILRVWDMQTTSPIAVLTGHTGMITSVNFCP 277
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: UPI000C86F3C0 (bromodomain and WD repeat-containing protein 3 isoform X1 n=1 Tax=Drosophila grimshawi TaxID=7222 RepID=UPI000C86F3C0)

HSP 1 Score: 81.6 bits (200), Expect = 5.730e-16
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TG++I+TGADD +IK      IWS + GR++ +LRG S+ ITD+A++ D T L + S DR  RV D +T   +AVL GH   +  V F P
Sbjct:  186 VYCVLFDRTGRYIITGADDLLIK------IWSAADGRLLATLRGASAEITDMAINLDNTMLAAGSVDRILRVWDMQTTSPIAVLTGHTGMITSVNFCP 277
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: A0A034W379_BACDO (Bromodomain and WD repeat-containing protein 1 n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034W379_BACDO)

HSP 1 Score: 80.5 bits (197), Expect = 1.420e-15
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TG++I+TGADD +IK      IWS   GR++ +LRG S+ ITD+A++ D T L + S DR  RV D +T   +AVL GH   +  V F P
Sbjct:  187 VYCVLFDRTGRYIITGADDLLIK------IWSAMDGRLLATLRGASAEITDIAINLDNTMLAAGSLDRILRVWDMQTTSPIAVLSGHTGMITSVNFCP 278
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: UPI001601D772 (bromodomain and WD repeat-containing protein 3-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601D772)

HSP 1 Score: 80.5 bits (197), Expect = 1.430e-15
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY I F +TG+ I+TGADD+++K      IWS   GR+M +LRG SS ITD+AV+ + T L + S D+  RV D +T   ++VL GH A V  + F P
Sbjct:  192 VYCIAFDRTGKCIITGADDNLLK------IWSAHDGRLMATLRGMSSEITDMAVNYENTLLAAGSVDKTIRVWDMKTLAPVSVLMGHSAMVTSLQFCP 283
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: A0A034W2M6_BACDO (Bromodomain and WD repeat-containing protein 3 n=3 Tax=Dacini TaxID=43871 RepID=A0A034W2M6_BACDO)

HSP 1 Score: 80.5 bits (197), Expect = 1.450e-15
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TG++I+TGADD +IK      IWS   GR++ +LRG S+ ITD+A++ D T L + S DR  RV D +T   +AVL GH   +  V F P
Sbjct:  187 VYCVLFDRTGRYIITGADDLLIK------IWSAMDGRLLATLRGASAEITDIAINLDNTMLAAGSLDRILRVWDMQTTSPIAVLSGHTGMITSVNFCP 278
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: A0A6P4K720_DROBP (bromodomain and WD repeat-containing protein 3 isoform X2 n=2 Tax=ananassae subgroup TaxID=32347 RepID=A0A6P4K720_DROBP)

HSP 1 Score: 80.5 bits (197), Expect = 1.460e-15
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TG++I+TGADD +IK      IWS + GR++ +LRG SS ITD+A++ D T L + S DR  RV D +T   +AVL  H   +  V F P
Sbjct:  186 VYCVLFDRTGRYIITGADDLLIK------IWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSVDRILRVWDMQTTSPIAVLSAHTGMITSVNFCP 277
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: UPI001C8A32B4 (bromodomain and WD repeat-containing protein 3 n=1 Tax=Drosophila bipectinata TaxID=42026 RepID=UPI001C8A32B4)

HSP 1 Score: 80.5 bits (197), Expect = 1.460e-15
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TG++I+TGADD +IK      IWS + GR++ +LRG SS ITD+A++ D T L + S DR  RV D +T   +AVL  H   +  V F P
Sbjct:  186 VYCVLFDRTGRYIITGADDLLIK------IWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSVDRILRVWDMQTTSPIAVLSAHTGMITSVNFCP 277
[Close]
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Match: A0A6P4K6M3_DROBP (bromodomain and WD repeat-containing protein 3 isoform X1 n=1 Tax=Drosophila bipectinata TaxID=42026 RepID=A0A6P4K6M3_DROBP)

HSP 1 Score: 80.5 bits (197), Expect = 1.460e-15
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIITDLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP 98
            VY + F +TG++I+TGADD +IK      IWS + GR++ +LRG SS ITD+A++ D T L + S DR  RV D +T   +AVL  H   +  V F P
Sbjct:  186 VYCVLFDRTGRYIITGADDLLIK------IWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSVDRILRVWDMQTTSPIAVLSAHTGMITSVNFCP 277
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20562.5867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001EE61CA44.080e-1644.90bromodomain and WD repeat-containing protein 3-lik... [more]
UPI001EB08AF94.180e-1644.90bromodomain and WD repeat-containing protein 3-lik... [more]
B4JFX1_DROGR5.730e-1644.90GH18810 n=1 Tax=Drosophila grimshawi TaxID=7222 Re... [more]
UPI000C86F3C05.730e-1644.90bromodomain and WD repeat-containing protein 3 iso... [more]
A0A034W379_BACDO1.420e-1544.90Bromodomain and WD repeat-containing protein 1 n=1... [more]
UPI001601D7721.430e-1545.92bromodomain and WD repeat-containing protein 3-lik... [more]
A0A034W2M6_BACDO1.450e-1544.90Bromodomain and WD repeat-containing protein 3 n=3... [more]
A0A6P4K720_DROBP1.460e-1544.90bromodomain and WD repeat-containing protein 3 iso... [more]
UPI001C8A32B41.460e-1544.90bromodomain and WD repeat-containing protein 3 n=1... [more]
A0A6P4K6M3_DROBP1.460e-1544.90bromodomain and WD repeat-containing protein 3 iso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 35..74
e-value: 7.1E-4
score: 28.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 39..69
e-value: 3.0E-5
score: 24.7
coord: 1..25
e-value: 0.0026
score: 18.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 42..83
score: 10.208
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..25
score: 10.876
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..98
e-value: 1.4E-22
score: 81.8
NoneNo IPR availablePANTHERPTHR16266WD REPEAT DOMAIN 9coord: 1..98
NoneNo IPR availablePANTHERPTHR16266:SF17BRWD3coord: 1..98
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..98
score: 17.666
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20562contigH-elongata_contig20562:2253..2661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20562.5867.1mRNA_H-elongata_contig20562.5867.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20562 2253..2661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20562.5867.1 ID=prot_H-elongata_contig20562.5867.1|Name=mRNA_H-elongata_contig20562.5867.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
VYGIKFYQTGQFILTGADDHVIKVWCRIGIWSTSSGRIMPSLRGHSSIIT
DLAVSPDYTKLVSSSEDRNHRVRDPRTGPSLAVLRGHEAPVNLVCFAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf