prot_H-elongata_contig20509.5849.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20509.5849.1
Unique Nameprot_H-elongata_contig20509.5849.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: D8LGP1_ECTSI (MutS protein homolog 1B MutS-like ATPases involved in mismatch repair, family 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP1_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 3.770e-90
Identity = 157/196 (80.10%), Postives = 173/196 (88.27%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADE-REAYVSEIAGRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMTLKV 195
            GSTLEP+EIA V++ALEGL ELR++FCG+ A    DAKS  G+  +   TPRLAAVA EI LD+GL+GLL+GAFDS+GELS QRFPEIGRLR KA+SLRQGIKSTM RLMAGGEFSGMLADE REAYVSEIAGRFVIPV PTYKRTVGIVHDSSRTGKTLYVEPTQVVG TNELVE KL+LKVETQRIL+QMTLK+
Sbjct:  116 GSTLEPTEIAAVASALEGLFELREFFCGAVA----DAKSPGGMVDRSGKTPRLAAVAAEIKLDEGLLGLLRGAFDSQGELSAQRFPEIGRLRSKADSLRQGIKSTMSRLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEVKLQLKVETQRILSQMTLKI 307          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: A0A6H5JAB7_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB7_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 2.300e-78
Identity = 139/176 (78.98%), Postives = 152/176 (86.36%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADE-REAYVSEIAGRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVE 175
            GSTLE +EIA V++ALEGL ELR++FCG+ A    DAK   G+  +   TPRLAAVA EI LD+GL+GLL+GAFDS+GELS QRFPEIGRLR KA+SLRQGIKSTM RLMAGGEFSGMLADE REAYVSEIAGRFVIPV PTYKRTVGIVHDSSRTGKTLYVEPTQVVG TNELVE
Sbjct:  233 GSTLEATEIAAVASALEGLFELREFFCGAMA----DAKGAGGMVDRSGKTPRLAAVAAEIKLDEGLLGLLRGAFDSQGELSAQRFPEIGRLRSKADSLRQGIKSTMTRLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVE 404          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: A0A835YZI9_9STRA (Muts protein-like protein 1B muts-like ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI9_9STRA)

HSP 1 Score: 177 bits (448), Expect = 7.970e-48
Identity = 102/210 (48.57%), Postives = 134/210 (63.81%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADE-REAYVSEIAGRFVIPVRPTYKRT--------------VGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMTLKV 195
            G+TLEP E+ +VS  L  L  L+ +F   + +A     +  G  G    TP L  + + I LD  L+ LL  AFD+ GEL G++FPE+GRLR + + L   I+ ++ +L++ G FSGMLADE R AYVSE+ GRFV+PV+PTYKR               VGIVHD SRTGKTL++EP+ VV  TNELVE KL LK E  RIL++MT+KV
Sbjct:  108 GTTLEPPELREVSDCLTSLSNLKRFFNPEEGDAPVRGVTVSGGAGARYPTPTLQGLTRPIYLDPELVELLHEAFDATGELCGKKFPELGRLRARIDKLYDSIRQSVQKLLSSGTFSGMLADEGRGAYVSEVNGRFVLPVKPTYKRNGTCAAFCEAYDKRNVGIVHDVSRTGKTLFIEPSSVVEPTNELVELKLALKAEEARILSRMTIKV 317          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: A0A7S3Y253_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y253_HETAK)

HSP 1 Score: 165 bits (417), Expect = 2.300e-46
Identity = 95/195 (48.72%), Postives = 125/195 (64.10%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADEREAYVSEIAGRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMTLKV 195
            G+ LE  E+ +V+AALEGL  LR W  GS             I  K S+ P L A+ ++I   + L+ LL GAFD EGELSG++FP +G LR+     +Q I+S M  L+A  EF+ MLAD +   V E+ GR+V+ V+PTYKR+VGIVH  SR+GKT+YVEP QVV  TNEL E  + LK E  R+LA MTL++
Sbjct:  173 GTVLEVPELREVAAALEGLAALRKWLDGS-------------INEKASI-PTLKALGEDIRPSEQLVALLDGAFDEEGELSGKKFPRLGALREGILRKKQQIRSMMSSLLASAEFTAMLADPQ---VQELEGRYVVAVKPTYKRSVGIVHGDSRSGKTVYVEPAQVVEPTNELKELSIALKAEESRLLADMTLQI 350          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: K0RMS7_THAOC (Smr domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RMS7_THAOC)

HSP 1 Score: 129 bits (323), Expect = 5.700e-31
Identity = 82/197 (41.62%), Postives = 120/197 (60.91%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTP----RLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADERE-AYVSEIAGRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMT 192
            G  LE  EI DVS+ +E  L++ DW   +  E   D   GE    ++ +      +L ++ ++I +D+ L+ LL  AFD EG+LSG  FP IGRLR K  +L++GI S+++ ++A       LA E   + +SEI GR VIPV+  Y  +VGIVHD+SR+GKT YVEP++VV  TNEL  A+  L+ E  ++  Q+T
Sbjct:  407 GKVLEGPEILDVSSMMELCLDVLDWS-DALEEWNRDNVGGEESEFEFELQQEPFVQLPSLVKQIHMDEELIELLATAFDEEGKLSGTTFPSIGRLRSKIRTLKRGILSSIESILALPSMRNKLAVESGGSLMSEINGRIVIPVQQQYS-SVGIVHDASRSGKTSYVEPSEVVQPTNELRSAESELRAEEAKVWRQLT 601          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: B8CDA4_THAPS (Smr domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDA4_THAPS)

HSP 1 Score: 127 bits (319), Expect = 1.980e-30
Identity = 82/200 (41.00%), Postives = 111/200 (55.50%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKA-------EAESDAKSGEGIRGKWSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADERE-AYVSEIAGRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMT 192
            G  LE  EI +V+  LE  +++ DW    K        EA+SD K    +         L ++   I +DD L  LL  AFD EG LSG  FP IG LR K  + ++ I +++D L+A       LA E   A   EI GR VIPV+  Y+  +GIVHD+SR+GKT YVEPT++VG TNEL +A+  L+ E  R+  Q+T
Sbjct:  506 GKVLEGPEILEVTTMLEIAMDVLDWRYALKEFNEEIDNEADSDLKQEPFVE--------LVSLTDSIEIDDELFDLLTNAFDDEGRLSGTTFPFIGVLRAKVRTFKRDILASIDSLLAMPSMKNKLAVESGGALTMEINGRLVIPVQQKYQN-IGIVHDASRSGKTTYVEPTEIVGPTNELRQAEAELRSEEARVWRQLT 696          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: A0A7S0DIF7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIF7_9EUKA)

HSP 1 Score: 124 bits (310), Expect = 8.110e-30
Identity = 74/188 (39.36%), Postives = 102/188 (54.26%), Query Frame = 0
Query:    4 LEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADEREAYVSEIAGRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQM 191
            LE  E+A V  AL  L+ L DW                 +R      P L  +A++I +D  +  L  GAFD E  LS ++FP +  L+   +   + I+S MD L+   EF GML  +    +  I GRFV+ V+P +KR VGI HDSSRTGKTLY+EP QV+  TN ++EA   L+ E  +IL+ M
Sbjct:  298 LELDELASVGEALSALIVLEDWL--------------NQVRDGGPPAPNLLEIAKDIHIDAEIRELFDGAFDGES-LSREKFPHLKSLQDSIDKAERSIRSQMDSLVKSQEFDGMLESKS---IDRINGRFVLSVKPNFKRRVGIAHDSSRTGKTLYIEPFQVIEGTNAMIEAGRLLRQEEAKILSNM 467          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: A0A4D9D3J8_9STRA (Smr domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.250e-27
Identity = 74/193 (38.34%), Postives = 112/193 (58.03%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADEREAYVSEIAGRFVIPVRPTYKRT-VGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMT 192
            G+ LE  ++  ++ AL  L  LRD+    +A    +  S            +L+  A++I L   L+ LL  AFD +G LSG +FP++ RLR + + L   IK+T+ +LM     S M+ DE   Y+++  GRFV+P++ TYKR  +GIVHD S TG+T+YVEP QV+  TN++   +L L  E  RI+ +MT
Sbjct:  186 GNVLELPDLRSIAKALIILATLRDFV---QAPVRKERLS------------QLSQFAEDIDLPFELVDLLSDAFDQDGRLSGVKFPQLKRLRDEVDRLYGSIKNTVGQLMKSTGMSQMVTDE---YIAQRNGRFVLPIKNTYKRAGLGIVHDQSNTGQTVYVEPVQVIEPTNDMKRLELELLQEEARIVGEMT 360          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: A0A7S0Y8A7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8A7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 8.750e-27
Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 0
Query:    1 GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVTP---RLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADEREA-YVSEIA--------GRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMT 192
            G  LE  EI +VS+ +  + +++ W           ++S E I     V P    +  +   I L+  L  LL+ AFD+EG LSG+ FP +G+LR K  +L+  I +T+D +         LA E     VSE+A        GR V+P+ P Y   +GIVHDSSR+GKT+YVEP+++VG TNEL + +  L+ E  R+   +T
Sbjct:   42 GEVLEGPEILEVSSMMNAMEDVQLW-----------SRSLEHIVDHDDVLPMFVEIPRIVNSIELNTTLQVLLEEAFDNEGRLSGRTFPVLGQLRAKVRTLKADILATLDSITQLPSMKSKLALESGGPLVSEVASASGGNSGGRLVLPIDPKYASEMGIVHDSSRSGKTVYVEPSEIVGPTNELRQIERDLEAEEARVWRSLT 234          
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Match: A0A7S1YWC1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWC1_TRICV)

HSP 1 Score: 114 bits (284), Expect = 9.510e-27
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 0
Query:   14 AALEGLLELRDWFCGSKAEAESDAKSGEGIRGK-WSVTPRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQGIKSTMDRLMAGGEFSGMLADEREAYV-SEIAGRFVIPVRPTYKRTVGIVHDSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMTLKV 195
            ++L  L  L  W  G  +    D   G GI  + +   PRLA+    I +D  L+ LL+ AFD +G LSG  FPE+GRLR K  +L++ + + ++ L+A    S  L+ E    + SE+ GR V+PV  +   +VGIVHD SR+GKT Y EPT++V  TNE+  A+  L+ E  R    +T +V
Sbjct:    1 SSLRALERLERWGDGLASYKPPDDAPGGGIESETYRELPRLASF---IEVDPDLLELLEDAFDDDGRLSGDAFPEVGRLRSKVRTLKRDVLARLETLLAAPSLSSKLSLESGGPMYSEVNGRIVVPVDSSKGNSVGIVHDVSRSGKTSYAEPTELVAPTNEMRGAEAELRAEEARAWRTLTERV 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20509.5849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGP1_ECTSI3.770e-9080.10MutS protein homolog 1B MutS-like ATPases involved... [more]
A0A6H5JAB7_9PHAE2.300e-7878.98DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A835YZI9_9STRA7.970e-4848.57Muts protein-like protein 1B muts-like ATPase n=1 ... [more]
A0A7S3Y253_HETAK2.300e-4648.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K0RMS7_THAOC5.700e-3141.62Smr domain-containing protein n=1 Tax=Thalassiosir... [more]
B8CDA4_THAPS1.980e-3041.00Smr domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7S0DIF7_9EUKA8.110e-3039.36Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A4D9D3J8_9STRA4.250e-2738.34Smr domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S0Y8A7_9STRA8.750e-2736.27Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S1YWC1_TRICV9.510e-2738.59Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 2..192
IPR005747Endonuclease MutS2PANTHERPTHR11361:SF14DNA MISMATCH REPAIR PROTEIN MUTS, TYPE 2coord: 2..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20509contigH-elongata_contig20509:954..5723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20509.5849.1mRNA_H-elongata_contig20509.5849.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20509 954..5723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20509.5849.1 ID=prot_H-elongata_contig20509.5849.1|Name=mRNA_H-elongata_contig20509.5849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
GSTLEPSEIADVSAALEGLLELRDWFCGSKAEAESDAKSGEGIRGKWSVT
PRLAAVAQEITLDDGLMGLLKGAFDSEGELSGQRFPEIGRLRKKAESLRQ
GIKSTMDRLMAGGEFSGMLADEREAYVSEIAGRFVIPVRPTYKRTVGIVH
DSSRTGKTLYVEPTQVVGTTNELVEAKLRLKVETQRILAQMTLKVPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005747MutS2