prot_H-elongata_contig20168.5693.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: D8LRU5_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 7.320e-12 Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHVHD 43
VRS+GTE RV+GH+IPPS +FVCFRGQDI DLHVHD
Sbjct: 44 VRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHD 82
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: A0A836C876_9STRA (Scd6-like Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C876_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.390e-9 Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHVHD 43
V+S+GTE+RV+G +P SDE F + FRGQDIKDLHVHD
Sbjct: 40 VKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHD 78
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: A0A8C0XF66_CASCN (LSM14 domain-containing protein n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A8C0XF66_CASCN) HSP 1 Score: 56.2 bits (134), Expect = 1.380e-8 Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 2 KRAVRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHV 41
K AVRS+GTE R +IPP DE FE++ FRG DIKDL V
Sbjct: 40 KSAVRSFGTEDRPTDRLIPPRDEVFEYIIFRGSDIKDLTV 79
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: T1FY03_HELRO (LSM14 domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FY03_HELRO) HSP 1 Score: 54.3 bits (129), Expect = 4.820e-8 Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHVHD 43
VRS+GTE R H + P DE FE++ FRG DIKDLHV D
Sbjct: 41 VRSFGTEDRHTDHPVQPRDEIFEYIIFRGTDIKDLHVCD 79
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: A0A6J1HZ84_CUCMA (protein decapping 5-like n=1 Tax=Cucurbita maxima TaxID=3661 RepID=A0A6J1HZ84_CUCMA) HSP 1 Score: 56.6 bits (135), Expect = 8.690e-8 Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0
Query: 3 RAVRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHV 41
R VRS+GTE R G +PPSD+ FE++ FRG DIKDL V
Sbjct: 48 RNVRSFGTEGRKDGPQVPPSDKVFEYILFRGSDIKDLQV 86
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: V3ZYH6_LOTGI (LSM14 domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZYH6_LOTGI) HSP 1 Score: 53.1 bits (126), Expect = 1.470e-7 Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHV 41
VRS+GTE R +PP +E FE++ FRG DIKDLHV
Sbjct: 41 VRSFGTEDRPTDRPVPPREEIFEYIIFRGSDIKDLHV 77
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: UPI000779FB07 (protein LSM14 homolog A-A-like n=2 Tax=Acropora TaxID=6127 RepID=UPI000779FB07) HSP 1 Score: 55.8 bits (133), Expect = 1.620e-7 Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHVHDHDVEHKEVGRELKIHRPPDP 63
VRS+GTE R I P DE FEF+ FRGQDIKDLHV + +++E + H P DP
Sbjct: 41 VRSFGTEDREVEKYIAPRDEQFEFIVFRGQDIKDLHVCEAPQQNQE---RVNAHLPQDP 96
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: A0A7S2UZL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZL5_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.450e-7 Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHVHD 43
VRS+GTESR IPP+D+ FE++ FRG DIKDLHVH+
Sbjct: 41 VRSHGTESR-NAEFIPPNDKIFEYITFRGCDIKDLHVHE 78
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: A0A3M7Q2B1_BRAPC (LSM14-like protein (Fragment) n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7Q2B1_BRAPC) HSP 1 Score: 53.5 bits (127), Expect = 2.540e-7 Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHV 41
VRS+GTE R +PP DE FE++ FRG DI+DLHV
Sbjct: 40 VRSFGTEDRPTDRPVPPRDEVFEYIIFRGSDIEDLHV 76
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Match: T1G906_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G906_HELRO) HSP 1 Score: 55.1 bits (131), Expect = 2.990e-7 Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 0
Query: 5 VRSYGTESRVQGHMIPPSDETFEFVCFRGQDIKDLHV 41
VRS+GTE R H +P DE FE++ FRG DIKDLHV
Sbjct: 45 VRSFGTEDRPTDHPVPARDEVFEYIIFRGSDIKDLHV 81 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20168.5693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig20168.5693.1 ID=prot_H-elongata_contig20168.5693.1|Name=mRNA_H-elongata_contig20168.5693.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bpback to top |