prot_H-elongata_contig20127.5674.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20127.5674.1
Unique Nameprot_H-elongata_contig20127.5674.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length242
Homology
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 404 bits (1039), Expect = 3.470e-133
Identity = 191/242 (78.93%), Postives = 218/242 (90.08%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            M++EVERAPLPILHHN+DIWTDKGSGRKFLGLHVFYV   FE+KDALLS+KRY+P QG+LGD +AS+VL +IMKS+L EFGLKPS+LASGTTDSGSDV AVS N LW  Y V W WCFCHLMVKAAEQA+GIHLDPAKSKNP+AR++L+ V+KVVENLNKS N +AKFEDLQV++LGEIFK+VKHAPQRWLS TRT+ER IRLWHVLRK+YSDEG+NFPL+EGD  + ILQLYSLLQPLS I
Sbjct:  245 MVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSI 486          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 2.910e-115
Identity = 170/242 (70.25%), Postives = 200/242 (82.64%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            M+EEV  APLPILHH +DIW DK SGRKFLG+HVFYVT  FE+K  LLS+KRY P+Q ALG+AKA+EVLLEI+++ILHEFG +PS+LASGTTDSGSDV +VSVNGL   YGV W WC+CHLM+KAAE AFG H DP KSKNP+A  +L+N+I +V  L+KS NL AKFEDLQV+LLGE+ KI   APQRWL+  RT+ERVIRLWHVLRK+YSD GKNF L+EGDN + I QLYSLLQ LS +
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSV 242          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 5.200e-108
Identity = 164/242 (67.77%), Postives = 192/242 (79.34%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            M+ EV  APLPILHH +DIWTDK SGRKFLG+H+FYVT  FE+K AL+S             AKA+EVLL+I++S+LHEFGL+ S+LASGTTDSGSDV +VSVNGL   YGV W WC CHLMVKAAE AFG H DP KSKNP+ R++L+NVI +V  L+KS NL AKFED+QV+LLGEI KI   APQRWL+  RTLERVIRLWHVLRK++SD GK FPL+EGDN + ILQLYSLLQPLS +
Sbjct:  171 MLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALIS-------------AKAAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSV 399          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 3.460e-106
Identity = 162/242 (66.94%), Postives = 192/242 (79.34%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            M+EEV  APLPILHH +DIW DK SGRKFLG+HVFYVT  FE+K  LLS         ALG+ KA+EVLLEI+++IL+EFGL+PS+LASGTTDSGSDV +VSVNGL   YGV W WC+CHLMVKAAE AFG   DP  SKNP+AR +L+N+I ++  L+KS NL AKFEDLQV+LLGE+  I   APQRWL+  RT+ERVIRLW V+RK+YSD GKNFPL+EGDN + I QLYSLLQPLS +
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSV 233          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.140e-93
Identity = 141/193 (73.06%), Postives = 164/193 (84.97%), Query Frame = 0
Query:   50 VKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            +KRYSP+Q ALG+A ASEVLLEI KSIL EFGL+PS+LASGTTDSGSDV + SVNGL+  YGV W WCFCHLMVKAAE  FG H+DP KSKNP+AR++L+NVI +V  LN+SSN +AKFEDLQV+LLG++ KI   APQRWL+  RTLERVIRLWHVLRK+YSD GKNFPL+EGDN N ILQL+SLLQ LS +
Sbjct:   10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSV 202          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 2.740e-92
Identity = 145/242 (59.92%), Postives = 175/242 (72.31%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            M+EEV+ APLPILHH +DIWTDKGSGRK L                    +R  P            VLLEI+K+ILHEFGL+ S+LASGT DSGSDV +VS NGL   +GV W WCFCHLMVKAAE  FG H+DP KSKNP+AR++L+ +I +V  L++SSN +AKF+DLQV++LGE+ KI   AP+RWL+  RTLERVIRLWHVLRK+YSD GK FPL+EGDN + ILQLYSLLQP S +
Sbjct:   42 MLEEVKNAPLPILHHMIDIWTDKGSGRKTLW-------------------ERPRPG-----------VLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSV 253          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 2.670e-87
Identity = 131/242 (54.13%), Postives = 177/242 (73.14%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            M EE+ +APLPI+H+ +D+WT K SGRK+LG+HVFYV   F ++ AL+SVK Y+P+    G  KASE+L  I ++ L E+G+K S+LA GTTDSGSDV A+ VN L   + + W WC CHL  K+AE  FG   DP +SKN  AR++++ VIK    +N+S+ ++ KFE + +E+L EI KI KHAPQRWLS    +ER+IRLWHVLRK+Y+++G+ FPL +G+N + ILQLYSLLQPLS I
Sbjct:  209 MQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAI 450          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 3.720e-87
Identity = 136/180 (75.56%), Postives = 154/180 (85.56%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALL--SVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGE 178
            M+EEV +APLP+LHH +DIWT+KGSGRKFLG+H++YVT  FEMK ALL   VKRYSP QGAL +A+ASEVLLEI+KSIL E GL PS+LASGTTDSGSDV AVSVNGL   YGV W WC CH+MVKAAEQAFG+H DP KSKNP AR++++ VIKVVENLNKSS LRAKFEDLQ ELLGE
Sbjct:   99 MLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAKFEDLQTELLGE 278          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 1.880e-84
Identity = 163/371 (43.94%), Postives = 193/371 (52.02%), Query Frame = 0
Query:    1 MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTD---------------------------------------------------------------------------------------------------------------------------------SGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            M+EEV  APLPILHH +DIW DK SGRKFLG+HVFYVT  FE+K  LLS         ALG+AKA+EVL+EI+++ILHEFGL+PS+LASGTTD                                                                                                                                 SGSDV +VSVNGL   YGV W WC+CHLMVKAAE AFG   DP  SKNP+AR +L+N+I ++  L+KS NL AKFEDLQV+LLGE+  I   APQRWL+  RT+ERVIRLW V+RK+YSD GKNFPL+EGDN + I QLYSLLQPLS +
Sbjct:    1 MLEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEAKAAEVLVEILEAILHEFGLRPSDLASGTTDKRYRPSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSV 362          
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 3.460e-81
Identity = 129/197 (65.48%), Postives = 156/197 (79.19%), Query Frame = 0
Query:   46 ALLSVKRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRNVIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERVIRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI 242
            A   +KRY P+Q A+G+AKASEVLLEI+ +ILHEFGL+PS+LASGTTDSG DV +VSVNGL   +GV W  CF HLMVKAAE  FG H+DP KSKNPKAR++L+ +I +V  L++SSN +AKF DLQV++ GE+F     APQRWL+   TLERVIRLWHVLRK+YSD GK FPL+EGD  + ILQL SLLQPLS +
Sbjct:   14 AFAQIKRYQPSQDAVGEAKASEVLLEIVNAILHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSV 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20127.5674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJJ9_9PHAE3.470e-13378.93Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JB08_9PHAE2.910e-11570.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KS21_9PHAE5.200e-10867.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JZ66_9PHAE3.460e-10666.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE6_9PHAE1.140e-9373.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8D8_9PHAE2.740e-9259.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYQ2_9PHAE2.670e-8754.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ81_9PHAE3.720e-8775.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K0P1_9PHAE1.880e-8443.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT2_9PHAE3.460e-8165.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 12..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20127contigH-elongata_contig20127:2381..3475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20127.5674.1mRNA_H-elongata_contig20127.5674.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20127 2381..3493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20127.5674.1 ID=prot_H-elongata_contig20127.5674.1|Name=mRNA_H-elongata_contig20127.5674.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp
MMEEVERAPLPILHHNVDIWTDKGSGRKFLGLHVFYVTEKFEMKDALLSV
KRYSPAQGALGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNA
VSVNGLWIFYGVPWTWCFCHLMVKAAEQAFGIHLDPAKSKNPKARELLRN
VIKVVENLNKSSNLRAKFEDLQVELLGEIFKIVKHAPQRWLSFTRTLERV
IRLWHVLRKIYSDEGKNFPLKEGDNNNGILQLYSLLQPLSLI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf