prot_H-elongata_contig20101.5664.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20101.5664.1
Unique Nameprot_H-elongata_contig20101.5664.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length35
Homology
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A8J6CDU3_DIALT (Peptide deformylase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDU3_DIALT)

HSP 1 Score: 54.7 bits (130), Expect = 9.110e-8
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNPGERERALKA 34
            MYAS GVGLAAPQVGVNKRL+VFNP   ER + A
Sbjct:  108 MYASKGVGLAAPQVGVNKRLLVFNPEGDERKMSA 141          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A2V3IIC5_9FLOR (Peptide deformylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIC5_9FLOR)

HSP 1 Score: 54.7 bits (130), Expect = 9.430e-8
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNPGERERAL 32
            MYAS GVGLAAPQVG+NKRLMVFNP   +RA 
Sbjct:  108 MYASRGVGLAAPQVGINKRLMVFNPEGEQRAF 139          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: R7QRS0_CHOCR (Peptide deformylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRS0_CHOCR)

HSP 1 Score: 54.3 bits (129), Expect = 1.340e-7
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNP-GERERALK 33
            MYAS GVGLAAPQVGVNKRLMVFNP GE +  LK
Sbjct:  112 MYASRGVGLAAPQVGVNKRLMVFNPDGESKAFLK 145          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A0G4FVR9_VITBC (Peptide deformylase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FVR9_VITBC)

HSP 1 Score: 52.8 bits (125), Expect = 4.870e-7
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNPGERER 30
            MYA+ GVGLAAPQVG+NKRLMVFNP  R R
Sbjct:  115 MYAAGGVGLAAPQVGINKRLMVFNPSGRMR 144          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: Q2IA88_ISOGA (Peptide deformylase (Fragment) n=1 Tax=Isochrysis galbana TaxID=37099 RepID=Q2IA88_ISOGA)

HSP 1 Score: 52.0 bits (123), Expect = 6.440e-7
Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNP-GERER 30
            MYAS GVGLAAPQ+G+NKRLMVFNP G++E+
Sbjct:  119 MYASRGVGLAAPQLGINKRLMVFNPEGKKEK 149          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A7S4PNI0_GUITH (Peptide deformylase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PNI0_GUITH)

HSP 1 Score: 52.4 bits (124), Expect = 7.260e-7
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNP-GERERALK 33
            MYAS GVGLAAPQVG+NKR+MVFNP G++++ L+
Sbjct:  131 MYASRGVGLAAPQVGINKRIMVFNPEGDKKKWLQ 164          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A7S0E2U1_9CRYP (Peptide deformylase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2U1_9CRYP)

HSP 1 Score: 52.4 bits (124), Expect = 7.330e-7
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNP-GERERALK 33
            MYAS GVGLAAPQVG+NKR+MVFNP G++++ L+
Sbjct:  135 MYASRGVGLAAPQVGINKRIMVFNPEGDKKKWLQ 168          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A4D9D349_9STRA (Peptide deformylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D349_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 7.880e-7
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNP-GERERAL 32
            MYA NGVGLAAPQVGVN+RLMVFNP G+R + L
Sbjct:   50 MYAMNGVGLAAPQVGVNQRLMVFNPQGDRLKWL 82          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A7S3TH09_9SPIT (Peptide deformylase n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TH09_9SPIT)

HSP 1 Score: 52.0 bits (123), Expect = 9.460e-7
Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNP-GERER 30
            MYAS GVGLAAPQ+G+NKRLMVFNP G++E+
Sbjct:  124 MYASRGVGLAAPQLGINKRLMVFNPEGKKEK 154          
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Match: A0A7J7IEX3_9RHOD (Peptide deformylase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEX3_9RHOD)

HSP 1 Score: 52.0 bits (123), Expect = 9.460e-7
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 0
Query:    1 MYASNGVGLAAPQVGVNKRLMVFNP 25
            MYAS GVGLAAPQVGVNKRLMVFNP
Sbjct:  123 MYASRGVGLAAPQVGVNKRLMVFNP 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20101.5664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6CDU3_DIALT9.110e-876.47Peptide deformylase n=1 Tax=Diacronema lutheri Tax... [more]
A0A2V3IIC5_9FLOR9.430e-878.13Peptide deformylase n=1 Tax=Gracilariopsis chorda ... [more]
R7QRS0_CHOCR1.340e-782.35Peptide deformylase n=1 Tax=Chondrus crispus TaxID... [more]
A0A0G4FVR9_VITBC4.870e-780.00Peptide deformylase n=1 Tax=Vitrella brassicaformi... [more]
Q2IA88_ISOGA6.440e-777.42Peptide deformylase (Fragment) n=1 Tax=Isochrysis ... [more]
A0A7S4PNI0_GUITH7.260e-770.59Peptide deformylase n=1 Tax=Guillardia theta TaxID... [more]
A0A7S0E2U1_9CRYP7.330e-770.59Peptide deformylase n=1 Tax=Hanusia phi TaxID=3032... [more]
A0A4D9D349_9STRA7.880e-778.79Peptide deformylase n=1 Tax=Nannochloropsis salina... [more]
A0A7S3TH09_9SPIT9.460e-777.42Peptide deformylase n=1 Tax=Strombidinopsis acumin... [more]
A0A7J7IEX3_9RHOD9.460e-796.00Peptide deformylase n=1 Tax=Cyanidiococcus yangmin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036821Peptide deformylase superfamilyGENE3D3.90.45.10coord: 1..34
e-value: 1.4E-9
score: 39.0
IPR036821Peptide deformylase superfamilySUPERFAMILY56420Peptide deformylasecoord: 1..31
IPR023635Peptide deformylasePFAMPF01327Pep_deformylasecoord: 1..30
e-value: 3.2E-8
score: 33.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20101contigH-elongata_contig20101:1404..1508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20101.5664.1mRNA_H-elongata_contig20101.5664.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20101 1398..1508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20101.5664.1 ID=prot_H-elongata_contig20101.5664.1|Name=mRNA_H-elongata_contig20101.5664.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=35bp
MYASNGVGLAAPQVGVNKRLMVFNPGERERALKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036821Peptide_deformylase_sf
IPR023635Peptide_deformylase