prot_H-elongata_contig20088.5657.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20088.5657.1
Unique Nameprot_H-elongata_contig20088.5657.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length169
Homology
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 5.980e-49
Identity = 86/166 (51.81%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    7 SSSSYDDDAAVEAVLA-ACSYNTYMCCWTQNDEK--IEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQ-DYQGYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDN 168
            S S+YD+D  V  +L   C +NTYMCCWT +D    +  NTDVCRV+D P EG+  E P D EGP YCHGF W    +  +  LPLY+YV N ++ D  GYYGN+EG P+CGCIE+MPVVS + C+ F    +  C AN L  H+KNRL  P G+L++NLV  CDN
Sbjct:  117 SCSTYDEDVDVANILPETCEWNTYMCCWTGHDGSGGMYGNTDVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSRFGREGIEPCGANSLRSHYKNRLDEPKGELEYNLVRECDN 282          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.140e-47
Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 0
Query:    9 SSYDDDAAVEAVLAA-CSYNTYMCCWTQND--EKIEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQDYQG-YYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDN 168
            S+YD+D  V  +L   C +NTYMCCWT ND  + +  NTDVCRV D P EG + E+P DSEG  YCHGFGW    +     LPLY+ VIN  +  +G YYGN+EGAP CGC+EEMPVVS+S C+ F  + +T C  + L  ++ +R+  P G L+ NLV  CDN
Sbjct:   96 STYDEDVHVAYLLPEMCEWNTYMCCWTGNDGPDGMTSNTDVCRVWDYPEEGNSLEFPRDSEGSVYCHGFGWADGADVNTNILPLYHSVINTGRTEEGGYYGNVEGAPQCGCLEEMPVVSFSECSRFDGDGITDCGEHGLYSNYVSRIDEPNGPLEDNLVRICDN 259          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 3.110e-47
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 0
Query:   23 ACSYNTYMCCWTQND-EKIEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYD-QDYQGYYGNIEGAPACGCIEEMPVVSYSNCTTFTMN-----ELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDNA 169
            +CS+NTYMCCWT+ND E + DNTDVCRVVD PS GET E+PGDSEG  +CHGF W  D     + L L  +V N+D +D +GYYGNIEGAP CGCIEEMPVVS ++CTT+  +     + TAC  NDL   ++   + P G+L  NLV TCDNA
Sbjct:  321 SCSHNTYMCCWTENDGEGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHL-LSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYE--AEYPTGEL-ANLVDTCDNA 470          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 5.740e-47
Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 0
Query:    7 SSSSYDDDAAVEAVLA-ACSYNTYMCCWTQND--EKIEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQ-DYQGYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDN 168
            S S+YD+D  V  +L   C +NTYMCCWT +D  + +  N DVCRV+D P EG+  E P D EGP YCHGF W  D +  +  LPLY+YV N ++ D  GYYGN+EG P+CGCIE+MPVVS + C+ F    +  C  N L   +K +L  P G++++NLV  CDN
Sbjct:  160 SCSTYDEDVDVATILPETCEWNTYMCCWTGHDGSKGMYGNADVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADDADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDN 325          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: D7FT53_ECTSI (Imm downregulated 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT53_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.050e-45
Identity = 82/168 (48.81%), Postives = 107/168 (63.69%), Query Frame = 0
Query:    7 SSSSYDDDAAVEAVL-AACSYNTYMCCWTQND--EKIEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQDYQ--GYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDNA 169
            S S+YD+D  V  +L   C ++TYMCC+T +D  E +  NTDVC V   PSEG   E PGDSEGP YCHGF W    +     LPLY+YV N  +  +  GYYGN+EGAP CGCIEEMP VS++ C+ F+++ +  C    L   +  RL AP G+++ NLV +CDNA
Sbjct:   20 SCSTYDEDLEVAKLLDGTCEWDTYMCCYTNHDSGEGVTANTDVCSV---PSEG--LEMPGDSEGPVYCHGFAWPEGADVNNHILPLYHYVKNIGRTEEEGGYYGNVEGAPECGCIEEMPQVSFAECSRFSIDGIGECGEGGLYSQYNGRLDAPYGEMEHNLVRSCDNA 182          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: A0A6H5JT81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT81_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.280e-44
Identity = 72/148 (48.65%), Postives = 96/148 (64.86%), Query Frame = 0
Query:   24 CSYNTYMCCWTQND--EKIEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQ-DYQGYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDN 168
            C +NTYMCCWT +D  + +  N DVCRV++ P EG+  E P D EGP YCHGF W    +  +  LPLY+YV N ++ D  GYYGN+EG P+CGCIE+MPVVS + C+ F    +  C  N L   +K +L  P G++++NLV  CDN
Sbjct:   14 CEWNTYMCCWTGHDGSKGMYGNADVCRVLNYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDN 161          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: A0A6H5L9G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G6_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 4.700e-36
Identity = 70/168 (41.67%), Postives = 97/168 (57.74%), Query Frame = 0
Query:    7 SSSSYDDDAAVEAVLA-ACSYNTYMCCWTQND--EKIEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQDYQ--GYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDNA 169
            S ++YD+D  V  +L   C ++TYMCC+T +D  E +  NTDVC V               +EG  YCHGF W    +     LPLY+YV N  +  +  GYYG++EGAP CGCIEEMP VS++ C+ F ++ +  C    L   +  RL AP G+++ NLV +CDNA
Sbjct:   27 SCTTYDEDLEVAKLLDDTCEWDTYMCCFTNHDSGEGVTANTDVCSVP--------------NEGSVYCHGFAWPDGADVNNHILPLYHYVKNIGRTEEEGGYYGSVEGAPECGCIEEMPQVSFAECSRFDIDGIVGCGEGGLYSQYNGRLGAPYGEMEHNLVRSCDNA 180          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: A0A6H5L319_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L319_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 5.220e-34
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = 0
Query:    7 SSSSYDDDAAVEAVL-AACSYNTYMCCWTQND--EKIEDNTDVCRVVDSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQDYQ-GYY-----GNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDN 168
            S S+Y++   V  +L + C ++ YMCCWT ND  + +  N+DVCRV+D P EG++ E P +SEG   CHGF W    +     LPLY+YV N  +  + G+Y      ++EG P CGCIEE+P VS S C+ ++   +  C  N L   ++  L  P G +D NLV TCDN
Sbjct:   28 SCSTYEEHVEVAKLLDSTCEWDPYMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRESEGFVCCHGFAWAEGADVDTHILPLYHYVKNVGRTEEAGFYEMKLPDSVEGTPECGCIEEIPSVSCSECSRYSWEGIAGCGNNGLLSQYRGCLGEPCGPMDDNLVRTCDN 198          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: A0A7S2I1I6_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1I6_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.660e-16
Identity = 54/165 (32.73%), Postives = 77/165 (46.67%), Query Frame = 0
Query:   24 CSYNTYMCCWTQNDEKIE---------------DNTDVCRV--VDSPSEGETTE----YPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQDYQGYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCD 167
            C +   MCCWT +   +                DNTDVC V   +SP    T +    +PGD+EGP +C GF W+  DE        +  V+       GY  N+ GAP CGC+E+MPVVS++ C+   +N L      +L +    R+   G ++ F   G CD
Sbjct:  147 CHHRAAMCCWTADKYNVGGGSCTSAGCADGDPLDNTDVCHVDMKNSPLAAHTRDGVAVFPGDAEGPVHCQGFAWDEKDEMFRGNALFH--VVMKGLLSNGYTRNVPGAPMCGCVEQMPVVSHAVCSNTDVN-LQVTLVKELEEEL--RIYIGGKNISF---GNCD 303          
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Match: A0A7S1CX31_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CX31_CYCTE)

HSP 1 Score: 84.0 bits (206), Expect = 2.370e-16
Identity = 57/176 (32.39%), Postives = 72/176 (40.91%), Query Frame = 0
Query:   21 LAACSYNTYMCCWTQN-------------------DEKIEDNTDVCRV--VDSPSEGETTE----YPGDSEGPTYCHGFGWETDDEFLAVQLPLYN--YVINYDQ-DYQGYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNRLQAPGGDLDFNLVGTCDN 168
             A C     MCCWTQ+                   D    DNTDVC V    SP      +    Y  D EG  +CHGF W+T+    + Q    N  YV  YD    +GY  N+ GAP C C+E+MPVV+ S+CT     E             K  +     ++DFN     DN
Sbjct:   63 FAECDLRAVMCCWTQDRQANDDNGNCAEPYDENCVDADPADNTDVCYVDMERSPESNRVQQGLAVYENDDEGDAHCHGFAWDTNPNHESAQYKGVNLLYVSMYDHLSERGYVRNVPGAPMCACVEQMPVVTRSDCTEI---EFIKSWTGYTLSGDKLSMYITYSEVDFNACQGADN 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20088.5657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2N2_ECTSI5.980e-4951.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT54_ECTSI2.140e-4750.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FT55_ECTSI3.110e-4757.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2N0_ECTSI5.740e-4748.80Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FT53_ECTSI1.050e-4548.81Imm downregulated 17 n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JT81_9PHAE1.280e-4448.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L9G6_9PHAE4.700e-3641.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L319_9PHAE5.220e-3441.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2I1I6_9STRA1.660e-1632.73Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A7S1CX31_CYCTE2.370e-1632.39Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20088contigH-elongata_contig20088:1823..3115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20088.5657.1mRNA_H-elongata_contig20088.5657.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20088 1823..3115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20088.5657.1 ID=prot_H-elongata_contig20088.5657.1|Name=mRNA_H-elongata_contig20088.5657.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
SAERATSSSSYDDDAAVEAVLAACSYNTYMCCWTQNDEKIEDNTDVCRVV
DSPSEGETTEYPGDSEGPTYCHGFGWETDDEFLAVQLPLYNYVINYDQDY
QGYYGNIEGAPACGCIEEMPVVSYSNCTTFTMNELTACQANDLSKHHKNR
LQAPGGDLDFNLVGTCDNA
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