prot_H-elongata_contig200187.5635.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig200187.5635.1
Unique Nameprot_H-elongata_contig200187.5635.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: D7FVP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP2_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 3.720e-23
Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    2 EKDGDIDLVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVDDQGVDLDEEVSRRHQRFGLIDQ 72
            +   DIDL  AM NARANLA G SPGAGLESAFDQADAAFADLIVTSVDDQGV LD+E  +   + G++DQ
Sbjct:   75 DSSDDIDLSSAMANARANLAAGTSPGAGLESAFDQADAAFADLIVTSVDDQGVTLDDEEVQELAQSGMMDQ 145          
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: A0A835ZCH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH3_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.370e-15
Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    5 GDIDLVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVDDQGVDLDEEVSRRHQRFGLID 71
            GDI+L +A+ NAR NL EG+SPGAGL +A +QADAA+ADLI+TSVD + + L +E      + G++D
Sbjct:    7 GDIELAKALDNARRNLEEGKSPGAGLATAEEQADAAYADLILTSVDQKHLSLGDEDLAELTKAGMMD 73          
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: C1DZJ8_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZJ8_MICCC)

HSP 1 Score: 55.5 bits (132), Expect = 6.620e-8
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    8 DLVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVDDQGVDLDEEVSRRHQRFGLIDQ 72
            D+ +AM NARA    G SPGAGL  A  QA+AAFAD+I T+VD  G  LD E   +  R G +D+
Sbjct:   45 DISKAMENARACEKSGLSPGAGLADADAQAEAAFADMINTTVDVTGEALDSEELSQLSRGGKMDE 109          
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: C1MJA6_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MJA6_MICPC)

HSP 1 Score: 54.7 bits (130), Expect = 1.910e-7
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    9 LVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVDDQGVDLDEEVSRRHQRFGLID 71
            +  +M  ARA  A G SPGAGL SA DQA+AAFAD+I T+VD  G  LD +   R    G +D
Sbjct:   69 IAASMAAARACEASGMSPGAGLSSAEDQAEAAFADMINTTVDVTGEALDADARARLAEGGRMD 131          
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: A0A7S2FA39_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2FA39_9CHLO)

HSP 1 Score: 51.6 bits (122), Expect = 4.430e-6
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    9 LVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVD 50
            L  AM+NAR N  EG SPGAGL +A +QA+AAFADLI TS+D
Sbjct:  122 LEFAMSNARKNSLEGLSPGAGLMTAEEQAEAAFADLINTSLD 163          
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: A0A7R9XNM3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7R9XNM3_9CHLO)

HSP 1 Score: 51.6 bits (122), Expect = 4.840e-6
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    9 LVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVD 50
            L  AM+NAR N  EG SPGAGL +A +QA+AAFADLI TS+D
Sbjct:  119 LEFAMSNARKNSLEGLSPGAGLMTAQEQAEAAFADLINTSLD 160          
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: A0A830HV35_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HV35_9CHLO)

HSP 1 Score: 49.7 bits (117), Expect = 2.900e-5
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:   13 MTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVD 50
            M+NAR N  EG SPGAGL +A +QA+AAFADLI TS+D
Sbjct:   71 MSNARKNSLEGLSPGAGLMTAQEQAEAAFADLINTSLD 108          
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Match: D6PJB7_9ZZZZ (Uncharacterized protein n=1 Tax=uncultured organism MedDCM-OCT-S08-C998 TaxID=743643 RepID=D6PJB7_9ZZZZ)

HSP 1 Score: 47.8 bits (112), Expect = 3.070e-5
Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    9 LVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVDDQGVDLDEEV 60
            + +A+  A+ N    +SPGAG+E AF+ A+AA+ADLI+TS+D +  +L EE+
Sbjct:    1 MEQALAQAKENRDSNQSPGAGVEDAFEAAEAAYADLILTSIDQR--ELGEEL 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig200187.5635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FVP2_ECTSI3.720e-2370.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCH3_9STRA7.370e-1553.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
C1DZJ8_MICCC6.620e-850.77Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
C1MJA6_MICPC1.910e-750.79Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S2FA39_9CHLO4.430e-666.67Hypothetical protein (Fragment) n=1 Tax=Pycnococcu... [more]
A0A7R9XNM3_9CHLO4.840e-666.67Hypothetical protein (Fragment) n=1 Tax=Pycnococcu... [more]
A0A830HV35_9CHLO2.900e-568.42Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
D6PJB7_9ZZZZ3.070e-546.15Uncharacterized protein n=1 Tax=uncultured organis... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig200187contigH-elongata_contig200187:800..1015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig200187.5635.1mRNA_H-elongata_contig200187.5635.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig200187 800..1015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig200187.5635.1 ID=prot_H-elongata_contig200187.5635.1|Name=mRNA_H-elongata_contig200187.5635.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MEKDGDIDLVRAMTNARANLAEGRSPGAGLESAFDQADAAFADLIVTSVD
DQGVDLDEEVSRRHQRFGLIDQ
back to top