prot_H-elongata_contig199994.5630.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig199994.5630.1
Unique Nameprot_H-elongata_contig199994.5630.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
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BLAST of mRNA_H-elongata_contig199994.5630.1 vs. uniprot
Match: D8LI08_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI08_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 4.250e-40
Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 0 
Query:    1 RADPREHVIKGSVIAANQTEFPHSIDSFPPLLNSEVYYNGTSKRFWWNQNAEAVCVYAPVPTGFDPEKVEFVAKSRHVSFKVDGEE 86
            R + +E +IKGSVIAANQT FP+SIDSFPPL NSEVYYNGTS+R+WWNQNA+AV VY PVP  FD EKVEFVAK+RH+S K DGEE
Sbjct:  146 RVEAKEQLIKGSVIAANQTVFPYSIDSFPPLTNSEVYYNGTSERYWWNQNADAVSVYVPVPKDFDAEKVEFVAKTRHISLKFDGEE 231
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199994.5630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI08_ECTSI4.250e-4075.58CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 31..86
e-value: 2.7E-5
score: 26.1
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 31..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig199994contigH-elongata_contig199994:452..976 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig199994.5630.1mRNA_H-elongata_contig199994.5630.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig199994 452..976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig199994.5630.1 ID=prot_H-elongata_contig199994.5630.1|Name=mRNA_H-elongata_contig199994.5630.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
RADPREHVIKGSVIAANQTEFPHSIDSFPPLLNSEVYYNGTSKRFWWNQN
AEAVCVYAPVPTGFDPEKVEFVAKSRHVSFKVDGEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone