prot_H-elongata_contig199970.5627.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: D7FPC2_ECTSI (Tudor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC2_ECTSI) HSP 1 Score: 103 bits (258), Expect = 2.230e-24 Identity = 47/53 (88.68%), Postives = 52/53 (98.11%), Query Frame = 0
Query: 8 QQQVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVHE 60
+++VVDEIYS CDHVAPWAPGTSRVPS+AFCLLMKLFV+KLTRPQMNEILVHE
Sbjct: 118 REKVVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE 170
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: A0A6H5KEK1_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK1_9PHAE) HSP 1 Score: 101 bits (251), Expect = 1.950e-23 Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVHE 60
+VVDEIY CDHVAPWAPGTSRVPS+AFCLLMKLFV+KLTRPQMNEILVHE
Sbjct: 88 EVVDEIYRYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE 138
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: A0A3R7B771_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B771_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.430e-14 Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVHEVG 62
+VVDEIY R DH PWA GTSR+PST FCLLMK M+LT QM +L H V
Sbjct: 66 EVVDEIYYRVDHAEPWAAGTSRIPSTCFCLLMKFCTMRLTVNQMQGLLKHVVS 118
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: UPI0009AA8545 (pre-mRNA splicing factor SR-like 1 n=1 Tax=Zea mays TaxID=4577 RepID=UPI0009AA8545) HSP 1 Score: 69.3 bits (168), Expect = 1.790e-13 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVHE 60
+VVDEIY++ DHV PW G R PS+AFCLL KLF MKLT QM+ +L H+
Sbjct: 63 EVVDEIYNQVDHVEPWMTGNCRGPSSAFCLLYKLFTMKLTVKQMHNLLKHQ 113
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: W7TLT3_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLT3_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.930e-13 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVH 59
+V+DE+Y++ HV PWA GTSR+PSTAFCLL K F M+LT+ Q+ +L H
Sbjct: 69 EVIDEVYNKVTHVEPWATGTSRLPSTAFCLLFKFFTMRLTKKQVTGLLTH 118
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: A0A3L6D7C0_MAIZE (Pre-mRNA-splicing factor 38 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6D7C0_MAIZE) HSP 1 Score: 68.2 bits (165), Expect = 1.980e-13 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVHE 60
+ VDEIY++ DHV PW G R PS+AFCLL KLF MKLT QM+++L H+
Sbjct: 26 EAVDEIYNQVDHVEPWMTGNCRGPSSAFCLLYKLFTMKLTVKQMHDMLKHQ 76
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: UPI001D1A5254 (pre-mRNA splicing factor SR-like 1 isoform X2 n=5 Tax=Pooideae TaxID=147368 RepID=UPI001D1A5254) HSP 1 Score: 68.6 bits (166), Expect = 2.350e-13 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVH 59
+V+DEIY++ DHV PW G R PSTAFCLL KLF MKLT QM+ +L H
Sbjct: 39 EVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKLFTMKLTVNQMHGLLKH 88
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: A1YKG0_BRASY (Pre-mRNA-splicing factor 38 n=1 Tax=Brachypodium sylvaticum TaxID=29664 RepID=A1YKG0_BRASY) HSP 1 Score: 69.3 bits (168), Expect = 3.290e-13 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVH 59
+V+DEIY++ DHV PW G R PSTAFCLL KLF MKLT QM+ +L H
Sbjct: 39 EVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKLFTMKLTMNQMHGLLKH 88
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: A0A4D9DAU1_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAU1_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.760e-13 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVH 59
+V+DE+Y++ HV PWA GTSR+PSTAFCLL K F M+LT+ Q+ +L H
Sbjct: 69 EVIDEVYNKVTHVEPWATGTSRLPSTAFCLLFKFFTMRLTKKQVTGLLTH 118
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Match: F2EBP1_HORVV (Pre-mRNA-splicing factor 38 n=3 Tax=Triticeae TaxID=147389 RepID=F2EBP1_HORVV) HSP 1 Score: 68.6 bits (166), Expect = 6.160e-13 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 10 QVVDEIYSRCDHVAPWAPGTSRVPSTAFCLLMKLFVMKLTRPQMNEILVH 59
+V+DEIY++ DHV PW G R PSTAFCLL KLF MKLT QM+ +L H
Sbjct: 39 EVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKLFTMKLTVNQMHGLLKH 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199970.5627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig199970.5627.1 ID=prot_H-elongata_contig199970.5627.1|Name=mRNA_H-elongata_contig199970.5627.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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