prot_H-elongata_contig199645.5614.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig199645.5614.1
Unique Nameprot_H-elongata_contig199645.5614.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length189
Homology
BLAST of mRNA_H-elongata_contig199645.5614.1 vs. uniprot
Match: D8LF40_ECTSI (Putative two-pore calcium channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF40_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.630e-76
Identity = 131/186 (70.43%), Postives = 153/186 (82.26%), Query Frame = 0
Query:    1 QKANKQKLKSLFKLGVSKVVKQRAEEMDRMAKKGALYVMDAFAGRLKHGMAEMSTKSPYIFVAFRVQISWVWMWTIIVCSVAHSLMVFLEPRPGRGGEDGYLAPGTLRFLEAMFIAVYALDVALKVSYMGLKTYVKKPWQKLMIVITFILAVDATGLVGVRFARALRPGEIDTKELPLLVFFCIFS 186
            ++A KQKL+ LFK GVS+VV++RAEEMD MAKKG+LYVMDAFAGRL+HGMA MSTK  YIF+AFR+QIS  WMWTII  SVAHSL+VFLEPRPGR  EDG L PGTL  LEA FI VYALDVALK SYMGLK+YVKKPWQKLM+VI  +LA+DA+G+VGVRFARALRP  +  +   +  F+ + S
Sbjct:   66 KRARKQKLQRLFKQGVSRVVRERAEEMDLMAKKGSLYVMDAFAGRLQHGMAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRPGRPPEDGVLGPGTLLGLEAAFITVYALDVALKASYMGLKSYVKKPWQKLMVVIVLLLAIDASGVVGVRFARALRPAILSVRTRHIRRFYAVVS 251          
BLAST of mRNA_H-elongata_contig199645.5614.1 vs. uniprot
Match: A0A6H5KF87_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF87_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.270e-74
Identity = 130/186 (69.89%), Postives = 152/186 (81.72%), Query Frame = 0
Query:    1 QKANKQKLKSLFKLGVSKVVKQRAEEMDRMAKKGALYVMDAFAGRLKHGMAEMSTKSPYIFVAFRVQISWVWMWTIIVCSVAHSLMVFLEPRPGRGGEDGYLAPGTLRFLEAMFIAVYALDVALKVSYMGLKTYVKKPWQKLMIVITFILAVDATGLVGVRFARALRPGEIDTKELPLLVFFCIFS 186
            ++A KQKL+ LFK GVS+VV++RAEEMD MAKKG+LYVMDAFAGRL+HGMA MSTK  YIF+AFR+QIS  WMWTII  SVAHSL+VFLEPRPGR  +DG L PGTL  LEA FI VYALDVALK SYMGLK+Y KKPWQKLM+VI  +LAVDA+G+VGVRFARALRP  +  +   +  F+ + S
Sbjct:   66 KRARKQKLQRLFKQGVSRVVRKRAEEMDLMAKKGSLYVMDAFAGRLQHGMAAMSTKPWYIFMAFRLQISAYWMWTIIASSVAHSLLVFLEPRPGRPPDDGVLGPGTLLGLEAAFITVYALDVALKASYMGLKSYFKKPWQKLMVVIVLLLAVDASGVVGVRFARALRPAILSVRTRHIRRFYAVVS 251          
BLAST of mRNA_H-elongata_contig199645.5614.1 vs. uniprot
Match: A0A7S2XMD6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMD6_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.390e-18
Identity = 49/158 (31.01%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   11 LFKLGVSKVVKQRAEEMDRMAKKGALYVMDAFAGRLKHGMAEMSTKSPYIFVAFRVQISWVWMWTIIVCSVAHSLMVFLEPRPGRGGEDGYLAPGTLRFLEAMFIAVYALDVALKVSYMGLKTYVKKPWQKLMIVITFILAVDATGLVGVRFARALRP 168
            L +  +  + ++R + + + A+   L ++DAF GRLK+G+A  S KS  IF  F +Q S   ++T+I     H+L +F EP         Y       F++   I +Y  D+ALK+SY GLK Y    WQ++ +++T ++ +D        ++  LRP
Sbjct:   17 LLRKSIPDLARRRRKNVQQRAEYARLCILDAFQGRLKNGLASNSEKSKRIFTIFSIQTSASLLYTVIYACAFHTLSIFFEPENACSSSTIYY------FMQVSVILIYIFDIALKMSYQGLKEYWGHSWQQVYVIVTALICMDLLVCGCTHYSNFLRP 168          
BLAST of mRNA_H-elongata_contig199645.5614.1 vs. uniprot
Match: A9VBA5_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VBA5_MONBE)

HSP 1 Score: 54.3 bits (129), Expect = 1.110e-5
Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 0
Query:   37 YVMDAFAGRLKHGMAEMSTKSPYIFVAFRVQISWVWMWTIIVCSVAHSLMVFLEPRPGRGGEDGYLAPGTLRFLEAMFIAVYALDVALKVSYMGLKTYVKKPWQK 141
            YV+DA  GRL +G   +   +    + F +    +W   I + +  H+ + F EP P  G      A      LE + +AVY++D+ LK+ YMG + YV K W +
Sbjct:   65 YVLDAMDGRLANGRGNLYFANQAKQLCFLLHSHEMWTHMIYLVAFVHAFLAFWEP-PTWGH-----ASAVCYALEFLCLAVYSIDIYLKMVYMGARVYVSKKWHR 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199645.5614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF40_ECTSI1.630e-7670.43Putative two-pore calcium channel (Partial) (Fragm... [more]
A0A6H5KF87_9PHAE2.270e-7469.89Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S2XMD6_9STRA4.390e-1831.01Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A9VBA5_MONBE1.110e-531.43Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 63..171
e-value: 1.4E-7
score: 33.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..89
NoneNo IPR availableTMHMMTMhelixcoord: 70..89
NoneNo IPR availableTMHMMTMhelixcoord: 109..131
NoneNo IPR availableTMHMMTMhelixcoord: 144..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig199645contigH-elongata_contig199645:64..1095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig199645.5614.1mRNA_H-elongata_contig199645.5614.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig199645 64..1095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig199645.5614.1 ID=prot_H-elongata_contig199645.5614.1|Name=mRNA_H-elongata_contig199645.5614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
QKANKQKLKSLFKLGVSKVVKQRAEEMDRMAKKGALYVMDAFAGRLKHGM
AEMSTKSPYIFVAFRVQISWVWMWTIIVCSVAHSLMVFLEPRPGRGGEDG
YLAPGTLRFLEAMFIAVYALDVALKVSYMGLKTYVKKPWQKLMIVITFIL
AVDATGLVGVRFARALRPGEIDTKELPLLVFFCIFSIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027359Volt_channel_dom_sf