prot_H-elongata_contig199435.5609.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig199435.5609.1
Unique Nameprot_H-elongata_contig199435.5609.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length244
Homology
BLAST of mRNA_H-elongata_contig199435.5609.1 vs. uniprot
Match: A0A6H5KF78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF78_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 2.010e-47
Identity = 120/273 (43.96%), Postives = 158/273 (57.88%), Query Frame = 0
Query:    1 MARRAAE-RPIECTFTPVITKKASFRKNEKRVSRGYDSDD-----------------PCASEAEKVSTFDSLYLDAKRRREKMDALSDSRMKEAIVRASPVITTRGRKASAEPLDVRLKQNTERWARRREELEDRKLTLEHVGCTFSPNFNIGCTASAPRMKLARSGSGNLGEN---------SSFVERTTRFQAEREMKLEKLKQEALEKERAEATFQPKITACGGE---DVGAQGADVFDRLAKAATAQEVNKSARKDELWKQELEKYNDF 243
            +ARRA E RP ECTFTP I+K+       + + RGY SD                            TFD+LY DAKRR+ KM+AL  +  +E   R SPVIT  GR+A+  P+DVR+K++ ERW RR +ELE++K   E  GCTF PNF+IG ++SAPRM+  RS                  +FV R+  F   RE  ++KLK+EA E+ERA ATF+P I   GG    D  +  ADVF+RL +AA  QE+NK+A K+E  K+E E+YNDF
Sbjct:  812 LARRAEEERPRECTFTPEISKRG------RSLVRGYSSDGGGGEXXXXXXXXXXXXXXXXXXXSLFDTFDALYQDAKRRQAKMEALKGAH-EEVGRRTSPVITAMGRQATGVPIDVRMKEDAERWVRRFQELEEKKAEKEKEGCTFMPNFSIGRSSSAPRMRPRRSNGXXXXXXXXXXXXXXIEAFVARSAIFLEARERNMKKLKEEAEERERALATFKPSILPWGGRSAADDASAAADVFERLLRAAENQEMNKAALKEEFLKKEREQYNDF 1077          
BLAST of mRNA_H-elongata_contig199435.5609.1 vs. uniprot
Match: D8LNB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB8_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.040e-45
Identity = 119/277 (42.96%), Postives = 155/277 (55.96%), Query Frame = 0
Query:    1 MARRAAE-RPIECTFTPVITKKASFRKNEKRVSRGYDSDDPCASEAEKV-------------------------STFDSLYLDAKRRREKMDALSDSRMKEAIVRASPVITTRGRKASAEPLDVRLKQNTERWARRREELEDRKLTLEHVGCTFSPNFNIGCTASAPRMKLARSGSGNLGEN-----SSFVERTTRFQAEREMKLEKLKQEALEKERAEATFQPKITACGG---EDVGAQGADVFDRLAKAATAQEVNKSARKDELWKQELEKYNDF 243
            +ARRA E +P ECTFTP I+K+       + + RGY  D                                    TFD+LY DAKRR+ KM+AL     +E   R SPVIT  GR+A+  P+DVR+K++ ERW RR +ELE++K   E  GCTF PNF+IG ++SAPRM+  RS              +FV R+  F   RE  +EKLKQEA E+ERA ATF+P I   GG    D  +  ADVF+RL +AA  QE+NK+A K+E  K+E E+ NDF
Sbjct:  802 LARRAEEEKPRECTFTPEISKRG------RSLVRGYSGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFDTFDALYQDAKRRQAKMEALKAH--EEVGTRTSPVITAMGRQATGVPVDVRMKEDAERWVRRFQELEEKKAEKEKEGCTFMPNFSIGRSSSAPRMRPRRSNXXXXXXXXXXGIEAFVARSAIFLETRERNMEKLKQEAEERERALATFKPSILPWGGGSAADDASSAADVFERLLRAAENQEMNKAALKEEFLKKEREQNNDF 1070          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199435.5609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF78_9PHAE2.010e-4743.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNB8_ECTSI2.040e-4542.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..187
NoneNo IPR availablePANTHERPTHR37028FAMILY NOT NAMEDcoord: 3..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig199435contigH-elongata_contig199435:69..800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig199435.5609.1mRNA_H-elongata_contig199435.5609.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig199435 69..800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig199435.5609.1 ID=prot_H-elongata_contig199435.5609.1|Name=mRNA_H-elongata_contig199435.5609.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=244bp
MARRAAERPIECTFTPVITKKASFRKNEKRVSRGYDSDDPCASEAEKVST
FDSLYLDAKRRREKMDALSDSRMKEAIVRASPVITTRGRKASAEPLDVRL
KQNTERWARRREELEDRKLTLEHVGCTFSPNFNIGCTASAPRMKLARSGS
GNLGENSSFVERTTRFQAEREMKLEKLKQEALEKERAEATFQPKITACGG
EDVGAQGADVFDRLAKAATAQEVNKSARKDELWKQELEKYNDFK
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