prot_H-elongata_contig198439.5561.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig198439.5561.1
Unique Nameprot_H-elongata_contig198439.5561.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: D7G5W8_ECTSI (Putative homoaconitate hydratase, c-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W8_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.580e-33
Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L      ++  + +L+I G+TLA+IFREAGCLEPASPSCAACLGGPADTYARMN+PFQCVSTTNRNFPGRMGHK   +Y+
Sbjct:  151 PTFLVPATQKVYNDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNQPFQCVSTTNRNFPGRMGHKDAGIYL 233          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: A0A6H5KHV3_9PHAE (3-isopropylmalate dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV3_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.990e-31
Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L      ++  + +L+I G+TL +IFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHK   +Y+
Sbjct:  408 PTFLVPATQKVYNDIQTLKIGGRTLGSIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYL 490          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: X2KY86_SCYLO (3-isopropylmalate dehydratase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY86_SCYLO)

HSP 1 Score: 124 bits (311), Expect = 2.290e-31
Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L      ++  + ++ I G+TLA+IFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHK   +Y+
Sbjct:  427 PTFLVPATQKVYNDIQTMTIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKGAGIYL 509          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: A0A835YVF1_9STRA (3-isopropylmalate dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF1_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.160e-28
Identity = 53/77 (68.83%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHK 85
            P  L      ++  + +L+I G+T+A IFREAGC+EPASPSCAACLGGPADT+ARMNEP  CVSTTNRNFPGRMGHK
Sbjct:  356 PTFLVPATQKVYNDIQNLKINGRTMAQIFREAGCIEPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHK 432          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: W7TZ20_9STRA (3-isopropylmalate dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ20_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.530e-27
Identity = 53/77 (68.83%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHK 85
            P  L      ++  L SL + G+TLA IFR+AGC++PASPSCAACLGGPADT+ARMNEP  CVSTTNRNFPGRMGHK
Sbjct:  390 PTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHK 466          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: A0A6P0Y465_9CYAN (3-isopropylmalate dehydratase (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0Y465_9CYAN)

HSP 1 Score: 102 bits (254), Expect = 2.500e-26
Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L     +++  L S++ +GQTL+ IF  AGCLEPA PSCAAC+GGP DT+ R+NE   CVSTTNRNFPGRMG+K   +Y+
Sbjct:    9 PTYLVPATQTVYNDLFSIKHDGQTLSEIFLNAGCLEPAPPSCAACVGGPLDTFGRLNEAHVCVSTTNRNFPGRMGNKQAQIYL 91          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: C0Z3H8_ARATH (AT4G13430 protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=C0Z3H8_ARATH)

HSP 1 Score: 103 bits (256), Expect = 6.790e-26
Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEG---QTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L      +W  + +L + G   +T A IF EAGC  PASPSC ACLGGPADTYAR+NEP  CVSTTNRNFPGRMGHK   +Y+
Sbjct:   67 PTFLVPATQKVWMDVYALPVPGAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEPQVCVSTTNRNFPGRMGHKEGQIYL 152          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: A0A699ZIY9_HAELA (3-isopropylmalate dehydratase n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZIY9_HAELA)

HSP 1 Score: 101 bits (252), Expect = 7.070e-26
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQI---EGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L      +W  + ++ +   +G+T A IF  AGC+ PA+PSCAACLGGP DT+ARMNEP  CVSTTNRNFPGRMGHK   +Y+
Sbjct:   17 PTYLVPATQKVWADVYTVPVPGCDGKTAAEIFEAAGCVTPAAPSCAACLGGPRDTFARMNEPEVCVSTTNRNFPGRMGHKEGQIYL 102          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: A0A2J8AI36_9CHLO (3-isopropylmalate dehydratase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AI36_9CHLO)

HSP 1 Score: 104 bits (260), Expect = 1.560e-25
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQI---EGQTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L      +W  + ++ +   +G+T A IF EAGC+ PA+PSCAACLGGP DT+ARMNEP  CVSTTNRNFPGRMGHK   +Y+
Sbjct:  165 PTYLVPATQKVWADVYTMPVPGCDGKTAAEIFEEAGCVSPAAPSCAACLGGPRDTFARMNEPEVCVSTTNRNFPGRMGHKEGQIYL 250          
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Match: A0A5J5ABA1_9ASTE (Aconitase domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5ABA1_9ASTE)

HSP 1 Score: 100 bits (249), Expect = 1.660e-25
Identity = 49/86 (56.98%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    9 PLLLENPVSSIWGFLLSLQIEG---QTLAAIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI 91
            P  L      +W  + SL + G   +T + IF +AGC  PASPSC ACLGGP DTYAR+NEP  CVSTTNRNFPGRMGHK   +Y+
Sbjct:   17 PTFLVPATQKVWMDIYSLPVPGSGGKTCSQIFEQAGCDTPASPSCGACLGGPRDTYARLNEPQVCVSTTNRNFPGRMGHKEGQIYL 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198439.5561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5W8_ECTSI3.580e-3369.88Putative homoaconitate hydratase, c-terminal part ... [more]
A0A6H5KHV3_9PHAE1.990e-3169.883-isopropylmalate dehydratase n=1 Tax=Ectocarpus s... [more]
X2KY86_SCYLO2.290e-3169.883-isopropylmalate dehydratase n=1 Tax=Scytosiphon ... [more]
A0A835YVF1_9STRA1.160e-2868.833-isopropylmalate dehydratase n=1 Tax=Tribonema mi... [more]
W7TZ20_9STRA1.530e-2768.833-isopropylmalate dehydratase n=2 Tax=Monodopsidac... [more]
A0A6P0Y465_9CYAN2.500e-2656.633-isopropylmalate dehydratase (Fragment) n=1 Tax=O... [more]
C0Z3H8_ARATH6.790e-2659.30AT4G13430 protein n=1 Tax=Arabidopsis thaliana Tax... [more]
A0A699ZIY9_HAELA7.070e-2655.813-isopropylmalate dehydratase n=2 Tax=Haematococcu... [more]
A0A2J8AI36_9CHLO1.560e-2556.983-isopropylmalate dehydratase n=1 Tax=Tetrabaena s... [more]
A0A5J5ABA1_9ASTE1.660e-2556.98Aconitase domain-containing protein n=1 Tax=Nyssa ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015931Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3GENE3D3.30.499.10coord: 23..90
e-value: 6.9E-15
score: 57.0
IPR001030Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainPFAMPF00330Aconitasecoord: 27..86
e-value: 2.1E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR43822:SF11coord: 29..90
NoneNo IPR availablePANTHERPTHR43822FAMILY NOT NAMEDcoord: 29..90
IPR036008Aconitase, iron-sulfur domainSUPERFAMILY53732Aconitase iron-sulfur domaincoord: 27..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig198439contigH-elongata_contig198439:100..372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig198439.5561.1mRNA_H-elongata_contig198439.5561.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig198439 100..372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig198439.5561.1 ID=prot_H-elongata_contig198439.5561.1|Name=mRNA_H-elongata_contig198439.5561.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
GGKGSSGQPLLLENPVSSIWGFLLSLQIEGQTLAAIFREAGCLEPASPSC
AACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKVIYLYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015931Acnase/IPM_dHydase_lsu_aba_1/3
IPR001030Acoase/IPM_deHydtase_lsu_aba
IPR036008Aconitase_4Fe-4S_dom