prot_H-elongata_contig19711.5501.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19711.5501.1
Unique Nameprot_H-elongata_contig19711.5501.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
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BLAST of mRNA_H-elongata_contig19711.5501.1 vs. uniprot
Match: A0A6H5KZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ4_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 4.860e-27
Identity = 86/182 (47.25%), Postives = 98/182 (53.85%), Query Frame = 0 
Query:    1 AKKLFGQASTGLPGNASIAGYCAVMKAAES-----GSVTALRQLARFIERNPRSVKGHALHARLLD----------------------SIVDARGRVKSDVRVKNEDEDEKIMD----------------REVESGDGLLLAEVARARALRGWLEVDPLEPRAVLGLAALHLERSAAVMGVA 139
            A++L  QA+TG PG+ASIAGY A   AA +     G   ALRQLA F+ERNP SVKGH LHARLL+                      S+    GR     R + + E    +                  E E  DGLLL  VARARALRGWLE DPLEPRAVL LAALH E SAAV+GVA
Sbjct:  336 AQRLLEQAATGSPGDASIAGYRAAATAASAASEGGGMPAALRQLAAFVERNPGSVKGHRLHARLLEMSRREAQXXXXXXXXXXXXXRLSLPQEEGR-----RDRGQGEGRDAIGGAGAQQAGAEKKAAGTAEEEDQDGLLLVGVARARALRGWLEADPLEPRAVLALAALHAEGSAAVVGVA 512
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19711.5501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KZZ4_9PHAE4.860e-2747.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19711contigH-elongata_contig19711:3047..3463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19711.5501.1mRNA_H-elongata_contig19711.5501.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19711 3047..3465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19711.5501.1 ID=prot_H-elongata_contig19711.5501.1|Name=mRNA_H-elongata_contig19711.5501.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
AKKLFGQASTGLPGNASIAGYCAVMKAAESGSVTALRQLARFIERNPRSV
KGHALHARLLDSIVDARGRVKSDVRVKNEDEDEKIMDREVESGDGLLLAE
VARARALRGWLEVDPLEPRAVLGLAALHLERSAAVMGVA
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