prot_H-elongata_contig197008.5495.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197008.5495.1
Unique Nameprot_H-elongata_contig197008.5495.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: D7FZ22_ECTSI (Putative zinc-protease albF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ22_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.710e-9
Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 MGLGWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNR 40
            +G GW  S IGYFYGGATIQGL+AY+Y+++APG A E++R
Sbjct:  219 VGPGWRRSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDR 258          
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: A0A482SAB1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAB1_9ARCH)

HSP 1 Score: 55.1 bits (131), Expect = 1.220e-7
Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    4 GWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNR 40
            GWGGS IG F+GG TIQG+M YFYHV+  G   ELNR
Sbjct:  236 GWGGSHIGNFWGGQTIQGIMPYFYHVIHNGDGEELNR 272          
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: A0A7S3HGE2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGE2_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.790e-6
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    4 GWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNR 40
            GW GS IG F+GG TIQG+M Y+Y++V P  A+ELNR
Sbjct:  270 GWEGSHIGNFWGGQTIQGIMPYYYNIVHPERALELNR 306          
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: B7G703_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G703_PHATC)

HSP 1 Score: 49.3 bits (116), Expect = 1.340e-5
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    2 GLGWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNRQV 42
            G GWGG K+G F+G  T QG+++Y+Y+V+ PG A+ELNR V
Sbjct:  247 GQGWGG-KVGPFHGSMTFQGIISYYYNVLHPGQAIELNRCV 286          
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: A0A7S1UJ30_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ30_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 1.830e-5
Identity = 19/38 (50.00%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 GLGWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELN 39
            G+ W G++IGY++GG T+QGL+ Y+Y V APG ++E++
Sbjct:  229 GIAWKGTRIGYYWGGRTVQGLLPYYYTVEAPGESLEVD 266          
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: A0A448YVT8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVT8_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.500e-5
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    4 GWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNR 40
            GWG  K+G FYGG TIQGL+ Y+Y  + PG +VELNR
Sbjct:  311 GWG-KKVGPFYGGMTIQGLLPYYYQWLHPGRSVELNR 346          
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: A0A7S0Y5G6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y5G6_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 6.410e-5
Identity = 24/39 (61.54%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    4 GWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNRQV 42
            GWGG   G FYG  T QG++ YFY V+ PGTAVELN  V
Sbjct:  318 GWGGVT-GVFYGSMTFQGIIPYFYDVLHPGTAVELNHCV 355          
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Match: A0A7S4AYQ1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AYQ1_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 6.410e-5
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    4 GWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNR 40
            GWG SK+G FYGG TIQGL+ +++  + PG +VELNR
Sbjct:  292 GWG-SKVGPFYGGMTIQGLLPWYFQYLHPGKSVELNR 327          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197008.5495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FZ22_ECTSI1.710e-965.00Putative zinc-protease albF n=1 Tax=Ectocarpus sil... [more]
A0A482SAB1_9ARCH1.220e-767.57Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3HGE2_9STRA2.790e-662.16Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B7G703_PHATC1.340e-556.10Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1UJ30_9STRA1.830e-550.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A448YVT8_9STRA2.500e-562.16Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0Y5G6_9STRA6.410e-561.54Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S4AYQ1_9STRA6.410e-559.46Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..42
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197008contigH-elongata_contig197008:305..430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197008.5495.1mRNA_H-elongata_contig197008.5495.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197008 293..430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197008.5495.1 ID=prot_H-elongata_contig197008.5495.1|Name=mRNA_H-elongata_contig197008.5495.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
MGLGWGGSKIGYFYGGATIQGLMAYFYHVVAPGTAVELNRQV
back to top