prot_H-elongata_contig19654.5484.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19654.5484.1
Unique Nameprot_H-elongata_contig19654.5484.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length376
Homology
BLAST of mRNA_H-elongata_contig19654.5484.1 vs. uniprot
Match: D7G2T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T2_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 1.170e-30
Identity = 145/404 (35.89%), Postives = 196/404 (48.51%), Query Frame = 0
Query:    1 QTELLEGKVSLLEEKLSVLVEQIDRFKSVELEGQRERDRLTSSHENTISRLEAEKLKSEEARK----NAHEL-RSEEFSRKLEEDRRAAREEEEARLAAMLKEERVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRARLAEAALGEAVLREVRETQSLIGEVSSSSSQLGPDARAGCLQRTEDGRNRETSRERPTVAMDTSSASTLGKIVKDTATLIKLTGAFYDRYSATHRG------------EVTPGAASARGAQQDKVSCSPVKRDFASDGGGESS-------AAYAAAANVRS------SISDP----FSAEHPLRVDRSNGTSHRWEEEHSRGTIVERSVEDARGDQSCRGSLEQLDRRCYDLLESNARLCLRLQALGLEYAGLVRELLASG 370
            +TELLEGK S          EQIDR+K+  L+ Q+++DRL  S E   S+L+ E    E+AR+    N+ E+ R  +  R+LEE R +A  E  ARL  +L+E                                    ERRAR  E A+GEAVLREVRETQ L+GE+S      G  A  G  + +   R   +  + P+ A+    AS L +IV + + LI+ TG FYDRYS TH+             E  PG+ S  G   +  +    +   A+ G G+S        AA A AA  RS      S  DP    FS + P     + G    W         ++R++E     ++   +L +LDR CY LLESNA+LCLR+Q LGLEYAGL REL+ASG
Sbjct:  329 KTELLEGKASXXXXXXXXXSEQIDRYKTEALQQQQDKDRLLRSQETLQSQLKEEVQSVEKARREFLSNSQEISRGRDKERELEEQRDSAAAEA-ARLTCLLEE------------------------------------ERRARREENAMGEAVLREVRETQGLLGEMSPH---RGDPAGTGPFRGSVLERGSSSDGDDPSSALGLQ-ASKLERIVAEASDLIRRTGHFYDRYSETHKNAGGEKNGDDEASEKLPGSNS--GLPGNDATAGRYQNRGAATGAGQSDRYEGRHRAASAEAAIERSFGANGRSPGDPPPGVFSPQQPP----AGGGHQPWRGREDSWNFLDRTLEHRHWVETG-PALRELDRACYSLLESNAQLCLRIQGLGLEYAGLTRELMASG 684          
BLAST of mRNA_H-elongata_contig19654.5484.1 vs. uniprot
Match: A0A6H5K601_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K601_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 6.260e-15
Identity = 72/195 (36.92%), Postives = 98/195 (50.26%), Query Frame = 0
Query:  204 ASTLGKIVKDTATLIKLTGAFYDRYSATHRG------------EVTPGAASA-------RGAQQDKVSCSPVKRDFASDGGGESSAAYAA-----AANVRSSISDPFSAEHPLRVDRSNGTSHRWEEEHSRGTIVERSVEDARGDQSCRGSLEQLDRRCYDLLESNARLCLRLQALGLEYAGLVRELLASGESKV 374
            AS L +IV + + LI+ TG FYDRYS TH+             E  PG  S+        G  Q++   +   +    +G   +++A AA      AN  S  + P     P ++  S G    W      G  ++R++E   G      +L +LDR CY LLESNA+LCLRLQ LGLEYAGL R+LLASG  +V
Sbjct:    8 ASKLERIVAEASDLIRQTGHFYDRYSETHKNAGGDKNGDDKASEKIPGGNSSLLGNDATAGRHQNRGVATAAGQSDRCEGRHRAASAGAAMERSFGANGSSPGNPPPGVFSPQQL--SAGGHQPWRGREDSGNCLDRTLEHRHG-VGAGPALRELDRACYSLLESNAQLCLRLQGLGLEYAGLSRQLLASGAKEV 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19654.5484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2T2_ECTSI1.170e-3035.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K601_9PHAE6.260e-1536.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19654contigH-elongata_contig19654:880..4145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19654.5484.1mRNA_H-elongata_contig19654.5484.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19654 880..4145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19654.5484.1 ID=prot_H-elongata_contig19654.5484.1|Name=mRNA_H-elongata_contig19654.5484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=376bp
QTELLEGKVSLLEEKLSVLVEQIDRFKSVELEGQRERDRLTSSHENTISR
LEAEKLKSEEARKNAHELRSEEFSRKLEEDRRAAREEEEARLAAMLKEER
VLREEDALRMSVILERKVAARDDKIERLGSLLEKERRARLAEAALGEAVL
REVRETQSLIGEVSSSSSQLGPDARAGCLQRTEDGRNRETSRERPTVAMD
TSSASTLGKIVKDTATLIKLTGAFYDRYSATHRGEVTPGAASARGAQQDK
VSCSPVKRDFASDGGGESSAAYAAAANVRSSISDPFSAEHPLRVDRSNGT
SHRWEEEHSRGTIVERSVEDARGDQSCRGSLEQLDRRCYDLLESNARLCL
RLQALGLEYAGLVRELLASGESKVK*
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