prot_H-elongata_contig19202.5316.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19202.5316.1
Unique Nameprot_H-elongata_contig19202.5316.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length685
Homology
BLAST of mRNA_H-elongata_contig19202.5316.1 vs. uniprot
Match: D7G850_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G850_ECTSI)

HSP 1 Score: 658 bits (1698), Expect = 1.220e-226
Identity = 390/698 (55.87%), Postives = 473/698 (67.77%), Query Frame = 0
Query:    1 MASENDMILLSCLPGAPAAGDATSIVRSALQRVIVRPPPAAMHNVGHIRTSPGMAGARRGEGTAQQFRAFFSSAHTAVVDGKFLRAFTATRARIILAGLTPLPVSGR-RGLPTVVAGVADSRSGLCFLGQRANPLGFSAFSIQREYDLESVGDGSAGQSVKIGELMHEHGRMGRASASALYDLWGTANGDNLGGCSRDGAGLRSPLAHLATVWDCSSYATRTLGSPPPPACSSLLVVGGVRAPRAATLVIRRSIEMLTAA----AGPIQAWLTSD-PLGCVNRSDGEA---------STEAEERERVHWNEELEALLSCSENMAEYAMKPRDESTGGDDAADSDTANGEGVDDTAIQERKDGSAVGTAESGAGYEQEAEIRRTDSDFSEKLWELAARRTDVACVRSAISSAFYAVGEGRIFPVVSRDNQTAIGRHIRSGVLLAREARYDNGRSVGVGVAPDEARAEAWRERGFALVSDIQSLADAFVELGVYKVTRDLLSWLETHAGVVAADIDRAFPLTAHDKPSSDDLSEKRSGAGAGVSTTSTYNRRLDRLITLADTVDLVALAQSYGAPWRQLAHPIFWELLLEPTGEEKGDNAGSGEGAEETVSYAMMDASVFQLKGVDEPLVLSGGAARLAQEALEGCPAHLIPEVLSSVAGVDSFAQLKRRQKERREQEAVAVVVDDAVGVFACKHRFIPW 683
            MASE+D+I+LSCL  APAAG+A S VRSALQ V+VRPP    H+ G      G A A  G G A   RA   S+++AVVD   LRAFTATRAR+ILAGLTP P  G  R LPTVVAGV+ +  GLCFLGQRA P G S+FS +R+ + E+ G     Q+++I +L+ E+G    ASA ALYDLWG ++GD LG C ++GA   +P A LAT WDCS++ATRTLGS PPPACSSLL++GG   P   +  IR +IE L  A    A P QA   +  P G      G A         S + EE+ER  W+E+L+ALLS SENMAE+A KP D   GG  + D+  A G   +DTA+Q+R DG  VG  E G+G ++  E  R D DFSE+LWELAAR TDV  VRSA++ AF AVGEG++FPV+SRD++TA+G HIR GV +AREARY +G S   G   DEA+AEAWRERG AL++D  SLA AFVELGV+KVTRDLL WLE +AGV+AAD+DRA P TA    + D  +    G+ AG       +RRLDRL+TLADT+DLVALAQSYGAPWRQLAHP+FWEL LEP G   G   G   GA ETVSY + +A +FQL G+DEP  LSG AAR AQ AL GCPA LIPEVLSSV G +SF +LKRR  E + + A   V  DAV  F C+H FIPW
Sbjct:   72 MASESDVIILSCLTKAPAAGEAASAVRSALQHVVVRPPSVTTHSPG----PGGRAAAAGGVGVAPTLRAISPSSYSAVVDSNLLRAFTATRARMILAGLTPPPAGGESRTLPTVVAGVSGAPGGLCFLGQRATPEGHSSFSFRRDSEQEAAG--GRAQALRIDDLVREYGGRAHASARALYDLWGDSSGDFLGECLQEGA-KSNPFARLATEWDCSTHATRTLGSAPPPACSSLLLIGGECPPTTVSAKIRGNIEALKTAVERGAAPQQARRKAKGPFGGEKGGTGRAEAHPGGASASGDGEEQERRRWDEDLQALLSGSENMAEFAAKPVDVPVGGGGSDDTLEA-GRAEEDTAVQDRTDGGGVGEEEVGSGMQEVPEKVRGDLDFSERLWELAARATDVEGVRSAVALAFDAVGEGQMFPVISRDSKTAVGCHIRDGVAMAREARYQDGTS---GCLGDEAKAEAWRERGSALLADEDSLASAFVELGVHKVTRDLLHWLEAYAGVLAADVDRALPDTAAAAAAGDRPAPGTGGSAAG-------DRRLDRLLTLADTLDLVALAQSYGAPWRQLAHPVFWELYLEPAG---GSGVG---GAMETVSYTLANAGLFQLSGLDEPPALSGEAARAAQAALSGCPARLIPEVLSSVTGAESFVELKRRLLEHKAKGAT--VGGDAV--FVCEHSFIPW 741          
BLAST of mRNA_H-elongata_contig19202.5316.1 vs. uniprot
Match: A0A6H5L254_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L254_9PHAE)

HSP 1 Score: 620 bits (1598), Expect = 3.070e-208
Identity = 381/746 (51.07%), Postives = 465/746 (62.33%), Query Frame = 0
Query:    1 MASENDMILLSCLPGAPAAGDATSIVRSALQRVIVRPPPAAMHNVGHIRTSPGMAGARRGEGTAQQFRAFFSSAHTAVVDGKFLRAFTATRARIILAGLTPLPVSGR-RGLPTVVAGVADSRSGLCFLGQRANPLGFSAFSIQREYDLESVGDGSAGQSVKIGELMHEHGRMGRASASALYDLWGTANGDNLGGCSRDGAGLRSPLAHLATVWDCSSYATRTLGSPPPPACSSLLVVGGVRAPRAATLVIRRSIEMLTAAA----GPIQAWL-TSDPLGCVNRSDGE---------ASTEAEERERVHWNEELEALLSCSENMAEYAMKPRDESTGGDDAADSDTANGEGVDDTAIQERKDGSAVGTAESGAGYEQEAEIRRTDSDFSEKLWELAARRTDVACVRSAISSAFYAVGEGRIFPVVSRDNQTAIGRHIRSGVLLAREARYDNGRSVGVGVAPDEARAEAWRERGFALVSDIQSLADAFVELGVYKVTRDLLSWLETHAGVVAADIDRAFPLTAH----DKPSSDDLSEKRSGAGAGVSTTSTYNRRLDRLITLADTVDLVALAQSYGAPWRQ-------------------------------------------LAHPIFWELLLEPTGEEKGDNAGSGEGAEETVSYAMMDASVFQLKGVDEPLVLSGGAARLAQEALEGCPAHLIPEVLSSVAGVDSFAQLKRRQKERREQEAVAVVVDDAVGVFACKHRFIPWK 684
            MASE+D+I+LSCL  AP AG+A S VRSALQ V+VRPP    H+ G      G A A  G G A   RA   S+++AVVD   LRAFTATRAR+ILAGLTP P  G  R LPTVV GV+ +  GLCFLGQRA P G S+FS +R+ + E+ G     Q+++I +L+ E+G    ASA ALYDLWG ++GD LG C ++GA L SP A LAT WDCS++ATRTLGS PPPACSSLL++GG   P   +  IR  I++L  A      P Q    T  P G      G          A  + EE+ER  W+E+L+ALLS SENMAE+A KP D   GG  + D+  A G   +DTA+Q+R DG  +G  E G+G ++  E  R D DFSE+LWELAAR TDV  VRSA++ AF AVGEG+IFPV+SRD++TA+G HIR GV +AREARY +G S  +G   DEA+AEAWRERG AL++D  +LA  FVELGV+KVTRDLL WLE +AGV+AAD+DRA P  A     DKP+             G   ++  +RRLDRL+TLADT+DLVALAQSYGAPWRQ                                           LAHP+FWEL LEP G   G   G   GA ETVSY + +A +FQL  +DEP  LSG AAR AQ AL  CPA LIPEVLSSV G +SF +LKRR    +   A   V  DAV  F C+H FIPW+
Sbjct:   72 MASESDVIILSCLTKAPTAGEAASAVRSALQHVVVRPPSVTTHSPG----PGGRAAAAGGVGVAPALRAISPSSYSAVVDSNLLRAFTATRARMILAGLTPPPAEGESRTLPTVVVGVSGAPDGLCFLGQRATPEGHSSFSFRRDSEQEAAG--GRAQALRIDDLVREYGGRAHASARALYDLWGDSSGDFLGECLQEGAKL-SPFARLATEWDCSTHATRTLGSAPPPACSSLLLIGGECPPTTVSAKIRGDIDVLKTAVERGVAPQQTRRKTKGPFGGGRGDTGRDEALPGGTCAPGDGEEQERRRWDEDLQALLSGSENMAEFAAKPVDVPVGGGGSDDALEA-GRAEEDTAVQDRTDGGGLGEEEVGSGMQEVPEKVRGDLDFSERLWELAARATDVKGVRSAVALAFNAVGEGQIFPVISRDSKTAVGCHIRDGVAMAREARYQDGTSACLG---DEAKAEAWRERGSALLADEDALASVFVELGVHKVTRDLLHWLEAYAGVLAADVDRALPAAAAAAVGDKPA------------PGTGGSAARDRRLDRLLTLADTLDLVALAQSYGAPWRQVRSLALSGLTALQRPPVAGPPPSSSPVFSLGLPKPIPPCARCKLAHPVFWELYLEPAG---GSGVG---GAMETVSYTLANAGLFQLSRLDEPPALSGEAARAAQAALSDCPARLIPEVLSSVTGAESFVELKRRLLMHKANGAS--VAGDAV--FVCEHSFIPWR 784          
BLAST of mRNA_H-elongata_contig19202.5316.1 vs. uniprot
Match: A0A7S3YDZ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDZ2_HETAK)

HSP 1 Score: 59.7 bits (143), Expect = 2.070e-7
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0
Query:  365 IRRTDSDFSEKLWELAARRTDVACVRSAISSAFYAVGEGRIFPVVSRDNQTAIGRHIRSGVLLAREARY 433
            + R D DF+E+LW++         V       F A+  G IFPV+ RDN TA+G ++R G+ +A+  RY
Sbjct:   15 VNRKDLDFTEQLWDVLCLCNTQEDVEGVFEETFQALQNGLIFPVIGRDNNTALGMYLREGLRIAQATRY 83          
BLAST of mRNA_H-elongata_contig19202.5316.1 vs. uniprot
Match: A0A1V9YH44_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH44_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.730e-6
Identity = 45/140 (32.14%), Postives = 62/140 (44.29%), Query Frame = 0
Query:  363 AEIRRTDSDFSEKLWELAARRTD----VACVRSAISSAFYAVGEGRIFPVVSRDNQTAIGRHIRSGVLLAREARYDNGRSVGVGVAPDEARAEAWRERGFALVSDIQSLADAFVELGVYKVTRDLLSWLETHAGVVAADI 498
            A + R D DF EK W L A        V  V   + S F   G G + P++  DN + +  H+R  V   +  RYD+       +APD A          AL  D  +     +++GVYK+ RDL  WL    GVV  D+
Sbjct:  318 ATVLRPDMDFLEKTWHLVAHTAPSTAAVVTVCRELQSCF---GHGSVLPLIHSDNTSDLAGHLRQLVRQVQHERYDHSE-----IAPDAAP---------ALAQDDAACLGYMLQVGVYKLQRDLAHWLGQQ-GVVLPDL 439          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19202.5316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G850_ECTSI1.220e-22655.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L254_9PHAE3.070e-20851.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3YDZ2_HETAK2.070e-737.68Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9YH44_9STRA3.730e-632.14Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..684
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19202contigH-elongata_contig19202:2685..4877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19202.5316.1mRNA_H-elongata_contig19202.5316.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19202 2679..4877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19202.5316.1 ID=prot_H-elongata_contig19202.5316.1|Name=mRNA_H-elongata_contig19202.5316.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=685bp
MASENDMILLSCLPGAPAAGDATSIVRSALQRVIVRPPPAAMHNVGHIRT
SPGMAGARRGEGTAQQFRAFFSSAHTAVVDGKFLRAFTATRARIILAGLT
PLPVSGRRGLPTVVAGVADSRSGLCFLGQRANPLGFSAFSIQREYDLESV
GDGSAGQSVKIGELMHEHGRMGRASASALYDLWGTANGDNLGGCSRDGAG
LRSPLAHLATVWDCSSYATRTLGSPPPPACSSLLVVGGVRAPRAATLVIR
RSIEMLTAAAGPIQAWLTSDPLGCVNRSDGEASTEAEERERVHWNEELEA
LLSCSENMAEYAMKPRDESTGGDDAADSDTANGEGVDDTAIQERKDGSAV
GTAESGAGYEQEAEIRRTDSDFSEKLWELAARRTDVACVRSAISSAFYAV
GEGRIFPVVSRDNQTAIGRHIRSGVLLAREARYDNGRSVGVGVAPDEARA
EAWRERGFALVSDIQSLADAFVELGVYKVTRDLLSWLETHAGVVAADIDR
AFPLTAHDKPSSDDLSEKRSGAGAGVSTTSTYNRRLDRLITLADTVDLVA
LAQSYGAPWRQLAHPIFWELLLEPTGEEKGDNAGSGEGAEETVSYAMMDA
SVFQLKGVDEPLVLSGGAARLAQEALEGCPAHLIPEVLSSVAGVDSFAQL
KRRQKERREQEAVAVVVDDAVGVFACKHRFIPWK*
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