prot_H-elongata_contig19195.5313.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19195.5313.1
Unique Nameprot_H-elongata_contig19195.5313.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length375
Homology
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A6H5JH17_9PHAE (Clu domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH17_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.440e-115
Identity = 222/332 (66.87%), Postives = 248/332 (74.70%), Query Frame = 0
Query:   55 MQVRQLLGEVPQTCLYSAFRLVAVAPG------GVRGAGDQDTVWKEEGEVMNDYVELRSIAAVAARPERVQVRMELEAYTTHTARQHVHKFRELLRYPPACPDGVGPGAKLGSGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXAPASPGGAMVETTTASEASHSAA----DPVAEDMAQRVQRALDIRSRLKDSRVPV-GGEGLGCFYKVGLGLAVDEVAHPSKEEVAAASGKGGDKDKDAPITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCHSHELATCLLAYSPSFAKVRAW 375
            MQVRQLLGE+PQTCLYSAFRLVA+ P       G    G  D VWK EG+VMND+VELRSI AVAARPE+V+VRMELE YT  TARQH+ KFRELL++PP C DGVGPG K G+G      XXXXXXXXXXXXXXX        + A+   A+V      E   +AA    DP AE  AQR+QRALDIR RLKDSRVPV G EGLG FY VGLGLAV+EVA PS EE      KGG KD+D PITCL+GVSVSAW+PPPPQRR+VGDLMYLEV ALDGT+I++TCTQGGFYVNGT R NFDP+P + NPCHSHELA CLLA + SFAK  AW
Sbjct:    1 MQVRQLLGEIPQTCLYSAFRLVALTPEPEGTEEGASSGGGGDAVWKREGDVMNDFVELRSIPAVAARPEKVEVRMELEPYTVSTARQHLQKFRELLKFPPPCQDGVGPGVKKGAGXX----XXXXXXXXXXXXXXXKAKESSANSGATAAKAVVAKAEGREGGAAAAVGEVDPAAEAAAQRIQRALDIRGRLKDSRVPVVGAEGLGAFYGVGLGLAVEEVASPSPEE-GGGKDKGG-KDRDGPITCLKGVSVSAWNPPPPQRRLVGDLMYLEVVALDGTVINITCTQGGFYVNGTSRGNFDPRPISGNPCHSHELAVCLLARNSSFAK--AW 324          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A836CKQ1_9STRA (Clustered mitochondria-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKQ1_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.640e-40
Identity = 139/353 (39.38%), Postives = 180/353 (50.99%), Query Frame = 0
Query:   30 ITVHPPQKSGAAP-LVLEPLAGVEMVMQVRQLLGEVPQTCLYSAFRLVAVAPGGVRGAGDQDTVWKEEGEVMNDYVELRSIAAVAAR-----------PERVQVRMELEAYTTHTARQHVHKFRELLRYPPACPDGVGPGAKLGSGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXAPASPGGAMVETTTASEASHSAADPVAEDMAQRVQRALDIRSRLKDSRVPVGG-EGLGCFYKVGLGLAVDEVAHPSKEEVAAASGKGGDKDKDAPITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCHSHELATCLLAYSPSF 369
            + VHPP+   AA  ++L+ +   EM   VRQLL E P+ C  ++++L  +A G         TV     E +ND+VEL S+  VAA            P  ++++ME+E YT    R HV +F+ELL YPP   DG  PG    S K          XXXXXXXXXXXXXXXXXX                      A+  A           D  +RLKD+ +PVG  +GL  FY V L     +++H  K    A  G G          CL+ +   AW+PPP +RR++GDL+YLEV  LD   +HVT T  GFYVN TR   FDP PAA  P  SH+L TCL++ SPSF
Sbjct:   51 VLVHPPKGCSAAQAILLQGITPTEMAASVRQLLLEAPEVCYMTSYKLHLLAGG--------KTV-----EEINDFVELESLEPVAAALAAAVAQEDAPPPTIEMQMEMEDYTVKKVRDHVKRFKELLMYPPEAADGTVPGDAEASSKARKKLAKTSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEQA-----------DALARLKDASIPVGRPQGLAAFYDVALAT---DISHVPK---GAGLGAGS--------RCLKSLVFGAWNPPPARRRLLGDLVYLEVVTLDDATLHVTATPAGFYVNNTRHATFDPAPAAV-PHFSHDLLTCLISASPSF 364          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A4D9CWV2_9STRA (Clu domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 8.810e-21
Identity = 101/332 (30.42%), Postives = 139/332 (41.87%), Query Frame = 0
Query:   43 LVLEPLAGVEMVMQVRQLLGEVPQTCLYSAFRLVAVAPGGVRGAGDQDTVWKEEGEVMNDYVELRSIAAVAARPERVQVRMELEAYTTHTARQHVHKFRELLRYPPACPDGVGPGAKLGSGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXAPASPGGAMVETTTAS-----EASHSAADPVAEDMAQRVQRALDIRSRLKDSRVPVGGEGLGCFYKVGLGLAVDEVAHPSKEEVAAASGKGGDKDKDAPITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCHSHELATCLLAYSPSF 369
            L L P+   E+ + V+Q+L E P+ C Y+++ LV      V+G+  +  +        ND+ EL     V     R+   M LE Y    AR HV + +ELL+YPP     + P A   +GK                            A A  GG  V +  A+           AD   E   Q+  RA+    RL     PV       F  V   LA      P+ E +  A              CL  +  S W+PPP  RR+ GDL+YLEV A+DG+++H+T    GFYVNGTR + FDP P       +H+L   L A  P F
Sbjct:   84 LTLPPVQASEVGLGVKQVLAEYPEACYYTSYALV------VKGSDPRVEI--------NDFTELNEYEGVFRGGARLV--MVLEDYDVRRARTHVRRLKELLQYPPV----LLPSAVKVTGKS---------------------------AGAGAGGTGVSSLGATLPIQARRKKEGADST-EAATQKELRAM--LERLPKVEFPVQISLDKLFPTVAGPLAT-----PAPEFLVPA--------------CLHNLGFSGWNPPPAHRRLQGDLLYLEVQAMDGSVLHLTAVPRGFYVNGTRGQVFDPSPDPAAAHFAHDLLPLLGAALPCF 346          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A484EBN9_BRELC (Clu domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBN9_BRELC)

HSP 1 Score: 102 bits (253), Expect = 9.200e-20
Identity = 98/374 (26.20%), Postives = 154/374 (41.18%), Query Frame = 0
Query:   24 EDIAVCITVHPPQKSGAAPLVLEPLAGVEMVMQVRQLLGEVPQTCLYSAFRLVAVAPGGVRGAGDQDTVWKEEGEVMNDYVELRSIAAVAARPERVQVRMELEAYTTHTARQHVHKFRELLRYPPACPDGVGPGAKLGSGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXAPASPGGAMVETTTASEASHSAADPVAEDMAQRVQRALDIRSRLKDSRVPVGGEGLGCFYKVGLGLAV----DEVAHPSKEEVAAASGKGGDKDKDA-----------------------PITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTAL-DGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCHSHELATCLLAYSPSF 369
            E++A+ I V PP   G A + LE L+  + V+ +RQL+ E P    Y+ + L A             ++  +  E +ND+VEL     V    + V +R+ L+ Y    AR HV +FR++L  PP   +     A  G   K                                      T  +S+ S      + E    +++R  +I   L+   +PV  E L  FY +   +AV     E    S +     SGK   +++                         P+ C++ ++ S ++PPP  R++VGDL+YLEV    D T+ H+T    GF+VN +   +FDP+P    P  SH L   L   SP+F
Sbjct:   26 EEVALSILVAPPITEGQA-VRLEGLSPSDTVLSLRQLIAEFPMLACYTCYHLEA------------KSLTSDSWEPLNDFVELSENENVV---DGVTLRIVLDKYDARNARAHVRRFRDVLSNPPIPQETFEREATPGVSDK--------------------------------------TEMSSDGSKMNEKNLDEISKHQLERLREIHYNLESIEIPVLPE-LVEFYSIPGAVAVTKERSEQIEKSNKNNEMKSGKKSKRNQQKVKQQQHIETNEQKKKEQQPEAKLPV-CIKSITYSGYNPPPGPRKLVGDLLYLEVNVNGDNTLYHITAHVDGFFVNSSTITHFDPRPNETTPSPSHLLVDLLSNVSPTF 343          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: M4BM91_HYAAE (Clu domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM91_HYAAE)

HSP 1 Score: 94.0 bits (232), Expect = 4.510e-17
Identity = 94/375 (25.07%), Postives = 145/375 (38.67%), Query Frame = 0
Query:   24 EDIAVCITVHPPQKSGAAPLVLEPLAGVEMVMQVRQLLGEVPQTCLYSAFRLVAVAPGGVRGAGDQDTVWKEEGEVMNDYVELRSIAAVAARPERVQVRMELEAYTTHTARQHVHKFRELLRYPPACPDGVGPGAKLGSGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXAPASPGGAMVETTTASEASHSAADPVAEDMAQRVQRALDIRSRLKDSRVPVGGEGLGCFYKV-GLGLAVDEVAHPSKEEVAAASGK----------------------GGDKDKDAPIT-----CLRGVSVSAWSPPPPQRRMVGDLMYLEVT-ALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCHSHELATCLLAYSPSF 369
            E +   +   PP    +  + LE ++  + V+ +RQLL E P    Y+ + L A +          D  W+     +NDYVEL     V      V +RM L+ Y     R HV +FRE+L  PP  P  +                                      +P+   G+     TA+E        + E   Q+++R  +I  +L+   VPV  + L  FY   G   A  E A   +  V     K                      G  K ++  +      CL+ +  S ++PPP  R++VGDL+YLEV  A + T  H+T    GF+VN +    FDP+P   +  ++  L   L + S  F
Sbjct:   19 ESVFSVLVAPPPSAPSSGTVRLESVSPADTVVTLRQLLAEFPALACYTCYHLEAKSL--------TDDTWQP----LNDYVELGDYETVT---NGVTLRMVLDKYDARKVRAHVRRFREVLTNPPIPPLAI-----------------------------------ELESPSDAVGSKDNEPTATEGEEMQDKKLKEVSEQQLKRLREIHYKLEGIEVPVVPD-LADFYSFPGASPAAQEEAEQVESAVKGKDQKXXXXXXXXXXXXXXXXXXLIEAGERKQQEHSVNAKLPVCLKSIVFSGYNPPPGPRKLVGDLLYLEVVVAGENTPYHITAHVDGFFVNRSTAIEFDPRPDMTDAGYTQLLVDLLSSVSSKF 342          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A1S8W761_9FUNG (Clu domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W761_9FUNG)

HSP 1 Score: 83.6 bits (205), Expect = 1.200e-13
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0
Query:  286 PITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCHSHELATCLLAYSPSF 369
            P +CL+ +++S+W+PPP QRRM GDL+YL ++ L+G ++ VT +  GFY+NG+    FDP P    P   H L   L   SP F
Sbjct:  323 PESCLQSIALSSWNPPPLQRRMAGDLLYLSISILEGIVLEVTASVSGFYINGSSSTVFDPLPNKETPDLVHMLPLLLSQASPKF 406          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A3Q2E3U2_CYPVA (Clustered mitochondria protein homolog n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=A0A3Q2E3U2_CYPVA)

HSP 1 Score: 80.1 bits (196), Expect = 9.600e-13
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 0
Query:  281 KDKDAPITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNP-CHSHELATCLLAYSPSFAK 371
            +D   P+ CLR ++ S+W+PPP  R+M GDLMY+ V  L+   + +TC+  GFY+N +   NF+PKPAA    CHS  L   L   SP+F K
Sbjct:   58 RDDWKPLQCLRVLTTSSWNPPPGNRKMHGDLMYVSVLTLEDRELSITCSTRGFYLNQSTAFNFNPKPAAPKIICHS--LIELLKQLSPAFKK 147          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A4P9W6Z1_9FUNG (Clustered mitochondria-domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W6Z1_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 1.010e-12
Identity = 39/87 (44.83%), Postives = 50/87 (57.47%), Query Frame = 0
Query:  284 DAPITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCHSHELATCLLAYSPSFA 370
            +A  TC R   +S W+PPP QRR+ GDLMYL VT L+    H+TC+  GF+ N +   +FDP P   + C  H L   L   SP FA
Sbjct:  267 EARETCFRQFGLSVWNPPPFQRRLAGDLMYLTVTTLEKDTYHITCSVSGFFANQSNGRDFDPTPRPKS-CLHHSLPGMLALLSPLFA 352          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: A0A6P7Z200_9AMPH (Clustered mitochondria protein homolog n=3 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7Z200_9AMPH)

HSP 1 Score: 80.5 bits (197), Expect = 1.210e-12
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0
Query:  286 PITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNPCH-SHELATCLLAYSPSFAK 371
            P+ CL+ + +S W+PPP  R+M GDLMYL V  ++   IH+T +  GFY+N +  + F+PKPA  NP H  H L   L   SP+F K
Sbjct:  230 PLQCLKALMMSGWNPPPGNRKMHGDLMYLSVFTMEDHHIHITASNRGFYINQSTDDIFNPKPA--NPSHLCHSLVELLGLISPAFKK 314          
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Match: UPI000742B6BB (clustered mitochondria protein homolog n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=UPI000742B6BB)

HSP 1 Score: 80.1 bits (196), Expect = 1.380e-12
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 0
Query:  281 KDKDAPITCLRGVSVSAWSPPPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAANNP-CHSHELATCLLAYSPSFAK 371
            +D   P+ CLR ++ S+W+PPP  R+M GDLMY+ V  L+   + +TC+  GFY+N +   NF+PKPAA    CHS  L   L   SP+F K
Sbjct:  328 RDDWKPLQCLRVLTTSSWNPPPGNRKMHGDLMYVSVLTLEDRELSITCSTRGFYLNQSTAFNFNPKPAAPKIICHS--LIELLKQLSPAFKK 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19195.5313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH17_9PHAE1.440e-11566.87Clu domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CKQ1_9STRA1.640e-4039.38Clustered mitochondria-domain-containing protein n... [more]
A0A4D9CWV2_9STRA8.810e-2130.42Clu domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A484EBN9_BRELC9.200e-2026.20Clu domain-containing protein n=1 Tax=Bremia lactu... [more]
M4BM91_HYAAE4.510e-1725.07Clu domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A1S8W761_9FUNG1.200e-1344.05Clu domain-containing protein n=1 Tax=Batrachochyt... [more]
A0A3Q2E3U2_CYPVA9.600e-1344.57Clustered mitochondria protein homolog n=1 Tax=Cyp... [more]
A0A4P9W6Z1_9FUNG1.010e-1244.83Clustered mitochondria-domain-containing protein n... [more]
A0A6P7Z200_9AMPH1.210e-1244.83Clustered mitochondria protein homolog n=3 Tax=Mic... [more]
UPI000742B6BB1.380e-1244.57clustered mitochondria protein homolog n=1 Tax=Cyp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028275Clustered mitochondria protein, N-terminalPFAMPF15044CLU_Ncoord: 96..144
e-value: 6.6E-7
score: 29.6
NoneNo IPR availablePANTHERPTHR12601:SF6CLUSTERED MITOCHONDRIA PROTEIN HOMOLOGcoord: 31..371
NoneNo IPR availablePANTHERPTHR12601EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3coord: 31..371
NoneNo IPR availableSUPERFAMILY103107Hypothetical protein c14orf129, hspc210coord: 287..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19195contigH-elongata_contig19195:103..2941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19195.5313.1mRNA_H-elongata_contig19195.5313.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19195 103..2941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19195.5313.1 ID=prot_H-elongata_contig19195.5313.1|Name=mRNA_H-elongata_contig19195.5313.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=375bp
DETSSEAIIKSDGSKSLGDGEEEEDIAVCITVHPPQKSGAAPLVLEPLAG
VEMVMQVRQLLGEVPQTCLYSAFRLVAVAPGGVRGAGDQDTVWKEEGEVM
NDYVELRSIAAVAARPERVQVRMELEAYTTHTARQHVHKFRELLRYPPAC
PDGVGPGAKLGSGKKGKGKGGGGGGGGKNRKSKETATAAGAKAPASPGGA
MVETTTASEASHSAADPVAEDMAQRVQRALDIRSRLKDSRVPVGGEGLGC
FYKVGLGLAVDEVAHPSKEEVAAASGKGGDKDKDAPITCLRGVSVSAWSP
PPPQRRMVGDLMYLEVTALDGTMIHVTCTQGGFYVNGTRRENFDPKPAAN
NPCHSHELATCLLAYSPSFAKVRAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028275CLU_N