prot_H-elongata_contig189457.5205.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig189457.5205.1
Unique Nameprot_H-elongata_contig189457.5205.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length131
Homology
BLAST of mRNA_H-elongata_contig189457.5205.1 vs. uniprot
Match: UPI0010A55CE9 (uncharacterized protein LOC114752370 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A55CE9)

HSP 1 Score: 58.9 bits (141), Expect = 1.620e-7
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   21 AKSLTGAEWWNTLGKASLPEMAQVAGRVLSMVPAAAGCERNWSLMGSVSEGKHARMSSNTMSNLVYVRTNLQLMYRENMKSKK 103
            A+ L   +WW+  G  S+PE+ QVA R+LS   +++GCERNWSL   +   +  R+    +++LV+   NL+L  R  +  KK
Sbjct:  607 AQKLDPHQWWSFYGS-SIPELQQVAIRILSQTSSSSGCERNWSLFERIHNKRRNRLEHERLNDLVFTNYNLRLKDRNLLNKKK 688          
BLAST of mRNA_H-elongata_contig189457.5205.1 vs. uniprot
Match: UPI0010A37B05 (uncharacterized protein LOC114731662 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A37B05)

HSP 1 Score: 58.9 bits (141), Expect = 1.630e-7
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   21 AKSLTGAEWWNTLGKASLPEMAQVAGRVLSMVPAAAGCERNWSLMGSVSEGKHARMSSNTMSNLVYVRTNLQLMYRENMKSKK 103
            A+ L   +WW+  G  S+PE+ QVA R+LS    ++GCERNWSL   +   +  R+    +++LV+   NL+L  R+ +  KK
Sbjct:  666 AQKLDPHQWWSFYGS-SIPELQQVAIRILSQTSTSSGCERNWSLFERIHTKRRNRLEHERLNDLVFTNYNLRLKDRDILNKKK 747          
BLAST of mRNA_H-elongata_contig189457.5205.1 vs. uniprot
Match: UPI0010A49E47 (uncharacterized protein LOC114750523 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A49E47)

HSP 1 Score: 57.8 bits (138), Expect = 3.590e-7
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   28 EWWNTLGKASLPEMAQVAGRVLSMVPAAAGCERNWSLMGSVSEGKHARMSSNTMSNLVYVRTNLQLMYRENMKSKK 103
            +WW+  G  S+PE+ QVA R+LS    ++GCERNWSL   +   +  R+    +++LV+   NL+L  R+ +  KK
Sbjct:  190 QWWSFYGS-SIPELQQVAIRILSQTSTSSGCERNWSLFERIHTKRRNRLEHERLNDLVFTNYNLRLKDRDILNKKK 264          
BLAST of mRNA_H-elongata_contig189457.5205.1 vs. uniprot
Match: UPI001652E070 (uncharacterized protein LOC110926009 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652E070)

HSP 1 Score: 53.5 bits (127), Expect = 1.080e-5
Identity = 27/70 (38.57%), Postives = 41/70 (58.57%), Query Frame = 0
Query:   27 AEWWNTLGKASLPEMAQVAGRVLSMVPAAAGCERNWSLMGSVSEGKHARMSSNTMSNLVYVRTNLQLMYR 96
            A+WWN  GK  +P + Q+A +VLS+  +++GCERNWS    +   K  R+    + +LV+V  N  L  R
Sbjct:  267 AQWWNLYGK-EVPNIQQLAMKVLSLTCSSSGCERNWSTFEQIHSKKRNRLEHKKLQDLVFVNYNKTLKNR 335          
BLAST of mRNA_H-elongata_contig189457.5205.1 vs. uniprot
Match: UPI0009C04824 (uncharacterized protein LOC110006618 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009C04824)

HSP 1 Score: 52.4 bits (124), Expect = 1.280e-5
Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   18 LEQAKSLTGAEWWNTLGKASLPEMAQVAGRVLSMVPAAAGCERNWSLMGSVSEGKHARMSSNTMSNLVYVRTNLQL 93
            L Q      A+WW   G  S P + ++A R+LS++ A++GCERNWS    V   +  R+     ++L++VR N +L
Sbjct:  111 LRQRNEEESAQWWRQHGS-SAPNLQKMAMRILSLITASSGCERNWSSFEMVHTKRRNRLEQRKPNDLIFVRENQRL 185          
BLAST of mRNA_H-elongata_contig189457.5205.1 vs. uniprot
Match: UPI00165300D7 (uncharacterized protein LOC110876300 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI00165300D7)

HSP 1 Score: 51.6 bits (122), Expect = 5.460e-5
Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 0
Query:   27 AEWWNTLGKASLPEMAQVAGRVLSMVPAAAGCERNWSLMGSVSEGKHARMSSNTMSNLVYVRTNLQLMYR 96
            A+WW+  GK  +P + Q+A +VLS+   ++GCERNWS    +   K  R+    + +LV+V+ N  L  R
Sbjct:  349 AQWWSLYGK-EVPNIQQLAMKVLSLTCCSSGCERNWSTFEQIHSKKRNRLEYKKLQDLVFVKYNKTLKNR 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189457.5205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI0010A55CE91.620e-737.35uncharacterized protein LOC114752370 n=1 Tax=Proso... [more]
UPI0010A37B051.630e-737.35uncharacterized protein LOC114731662 n=1 Tax=Proso... [more]
UPI0010A49E473.590e-738.16uncharacterized protein LOC114750523 n=1 Tax=Proso... [more]
UPI001652E0701.080e-538.57uncharacterized protein LOC110926009 n=1 Tax=Helia... [more]
UPI0009C048241.280e-535.53uncharacterized protein LOC110006618 n=1 Tax=Ambor... [more]
UPI00165300D75.460e-537.14uncharacterized protein LOC110876300 n=1 Tax=Helia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32166FAMILY NOT NAMEDcoord: 10..120
NoneNo IPR availablePANTHERPTHR32166:SF60coord: 10..120
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 17..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189457contigH-elongata_contig189457:328..720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189457.5205.1mRNA_H-elongata_contig189457.5205.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig189457 322..720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig189457.5205.1 ID=prot_H-elongata_contig189457.5205.1|Name=mRNA_H-elongata_contig189457.5205.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp
MIQYARYKSGNFPGAKFLEQAKSLTGAEWWNTLGKASLPEMAQVAGRVLS
MVPAAAGCERNWSLMGSVSEGKHARMSSNTMSNLVYVRTNLQLMYRENMK
SKKQHEEAGVVWEVDEDLERDGEPPSDTDDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf